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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28523_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_YTHDC2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0008186 F ATP-dependent activity, acting on RNA
GO:0016787 F hydrolase activity
GO:0034612 P response to tumor necrosis factor
GO:0044822 F RNA binding
GO:0044829 P positive regulation by host of viral genome replication
GO:0070063 F RNA polymerase binding
GO:0070555 P response to interleukin-1
GO:1990247 F N6-methyladenosine-containing RNA binding
Transcript
Level		FPKM:3.01 TPM:2.36
ORF EntryO_BomaASG10609_5prime_partial:A_BomaASG_c28523_g1_i1
Sequence
(Nucleotide)
GCGGGAAAGGTGTCAACCGCTATTTAACAGTATACAAAAGAGTAGGATCATCAATAATAC
AAAATGATGCAAAACTCCTTTTGGACTCAAACATGAGGTGTAGCATTGCAGAGCTATCAA
ATACTTTTCCCATCACTAACAAAGAGAAGGATGATTTAAGCAGTTGTCCTGAAAAGGAAA
GAAGCCCCCAACTCTCGCACAAGAGTTTGGGGCAACTCAATAATGGAGTTGCACAGATTC
CGAACACAACATACAATCCAGATTTATTGAAATTCAGAGAGAAACTTCCTGTTTATGAGC
AGAGGCAAGATTTAATGAATGCCATCGTTCACAATCAGGTCATTATAGTAGCCGGAGCTA
CAGGGTGTGGAAAAACAACACAGCTTCCACAACTGGTGCTGGAGTATTGTCAACAACGTG
GTCTTCCAGCCAGACTGTACTGCACCCAGCCGAGGAGAATTTCAGCTGTGTCTGTAGCCG
AAAGGGTGGCCTATGAAAGGATGGAGAAAATAGGACAGTCAATTGGCTACCAGATTCGTC
TGGAGTCGAGAGTCAGTCCTCGAACGGTGCTCACTTACTGCACCAACGGGGTGCTACTCA
GAACCCTCATGGGAGGAGACAGTGCACTTACTGGCGTGACCCACATACTGGTGGACGAGG
TCCACGAGCGCGACAAGTTCAGCGACTTCCTGCTGATCGCCCTCAGGGACGCGCTGCCCA
AGCACAAGGACCTCAAGCTCGTGCTCATGTCCGCCACCATGGACACGCAGATATTCTCCA
GGTACTTCAACAACTGCCCGGTAATAACCATTCCGGGGCGGCTCCACGAGGTCCAGCGGT
ACTATCTCGAAGACGTACTGAAGATAACCAAATACAGAACGCCGAAAATGGTTCAAGTTG
AAAAGGAACTGAAGAATAAATTGAAGTCCGGCAGGAGCTACTGGTCGCAGCTGGAGACTC
AAAAAGCCGAAGACGGACCAAGCAAGGAAGTTAAAGAAGAAAAGGAGAATGTTCTGGATG
CAGGTCTGCAGGCAGACATGGACGAGTTCATCGATGAATGCTTCAAGGAAGGCAGCTTGG
ACTCGTTCTGCCAGCTGCTGTACATGTACCTGTCGGAGGGCGTGCCCGTGCAGTGCGCGC
ACAGCCGCTCGGGCCGCTCGGGGCTCATGGCGGCGGCGGCGCGCGCCCTGCCCGAGACGC
TGCACCAGCTGCTGCACATGGGTGCCGATCCATCCGCCAAAGACAAAGACGGCAAGACGG
CGTACGACTACGCCGTGGACAGCGGACACGCCGAGTCCGCCAAGCTACTCGCCACCTTCA
ACCTCACCGAGGACTCCAAAGAAAACCTGGAGGACAACGACGGCGACAACTTCCTCCTCG
ACGTGTACCACCACACCTTCTCCGAGGAACTCATAGACCACGACCTGATGCTGGCTCTCA
TCAAGTACATCCACGTCACGCTGCCCAAAGGGAGCATACTGGTGTTCCTCCCGGGCTACG
ACGACATAGTGACCCTGAGGGACATGATCCAGTCTTGTCCGGAGATGAACGCCCAGAAGT
ACCAAATGTTCACGCTGCACAGCAACATGCAGACGGCCGACCAGAAGAAGGTGTTCAACG
CGCTGCCCAACGCCAGGAAGATCATCGTCTCGACCAACATCGCGGAGACGTCCATCACGA
TCGACGACGTGGTGTTCGTGGTGGACTCGTGCAAGGTGAAGGAGAAGTACTACGAGTCCA
ACGGCGGCGTGTGCACGCTGCAGTGCGTGTGGAGCTCGCGGGCCTGCTGCCAGCAGCGCG
CCGGCCGCGCGGGCAGGACCAAGCCCGGCCACTGCTTCCACATGTGCTCCAAGCGACGCT
TCCAGACCCTGCCGCTCAACTCCGTGCCGGAGATCCTCCGCGTGCCCCTCCAGGAGCTGT
GTCTGCACACCAAGCTGCTGGCTCCCGGGAACACGCCCATCGCTGACTTCCTGTCCAAAG
CGTTGGAGCCTCCCTCGTTCCTGGCCGTCAGAAACGCGGTCACGTTACTGAAGACCATAG
GGGCCCTGACCCCCATGGAGGACTTGACGGAGATCGGCCAACATCTACTAGACCTGACCG
TGGAGCCCAAGTTAGGGAAGATGTTGCTTTACGCGTGCGTGATGAAGTGCCTCGACCCTA
TACTGACCATAGTGTGCAGTCTCGCGAATAAAGAACCTTTCCAAATATCTTTGAACCCTG
AAAACAGGAAGAGAGGAAGTGCGGCTCGAAAAGAGTTCGCAGCCGACAGCTACTCCGACC
ATATGGCCTTATTGAGAGCTTTCCAAGCTTGGCAGACAGCGCGAGCGAATGGAAACGAAA
GAGCTTTCTGTACGAAGAACCTTATATGCGGAGCCACCATGGAAATGATCGTGGGATACA
GATCTCAATTGCTGGCCCAATTAAGAGCTCTGGGACTCGTCAAAGCTCGAGGATCGGGAG
ACATCAAAGACGTAAACTTGAACTCTGAGAAGTGGCATGTGGTGAAAGCTGTGTTAGTTA
GCGGCCTATATCCGTCCATAGCCCGCGTGGACAGGGACACCGGTACTTTGCGAACTTCGA
AAGAAGTCAAAGTGGCATTCCATCCCAGTTCCACTTTGCACAAGGGCGGCGGTATCACGG
GCTCCCAAAAATCGGTCATCAATGTTCCCACCGACTGGGTCGTGTTCGAAGAAATCTCAC
GAGCGGGACGGTTCTGTTTCATTCGG
(2726 bp)

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