SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28521_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		poly(A)_RNA_polymerase_gld-2_homolog_A_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001556 P oocyte maturation
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0003723 F RNA binding
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0007017 P microtubule-based process
GO:0007052 P mitotic spindle organization
GO:0007056 P spindle assembly involved in female meiosis
GO:0007343 P egg activation
GO:0007344 P pronuclear fusion
GO:0008298 P intracellular mRNA localization
GO:0016740 F transferase activity
GO:0035044 P sperm aster formation
GO:0035046 P pronuclear migration
GO:0043631 P RNA polyadenylation
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
Transcript
Level		FPKM:6.01 TPM:4.70
ORF EntryO_BomaASG10603_3prime_partial:A_BomaASG_c28521_g1_i1
Sequence
(Nucleotide)
GTGCTACAAAAGTCATGGCGGATTTTTTTCACAAGTTTTTATAGATTTGCCGTAATTTGT
GGGTAGATTTATTACTACCGGCGTCGAAAAAAATTTTAATTCTATTAACGGCAACAAGTA
AGCGATTAGTGAAATCCAAAGTCAAAAGAACGGAAACTTTGATTTAAAAAGCGGCCCAAC
ACAAACGTCTCGAATTTCTGTGAATTAATGATAAATAAAATCGTTCCAATTTTTAATAGG
ACGCTACGGACTCTTAAAATAATTTTTTTTCGCCTACTATGACGCAATAGGCTGTAAAAG
TGTGCCTTTAGATTAGCACTTCATACAGATATCGAAGATGAACGAGGGTGCGCCTGTAAT
GTTCCATGCAGGCGGTGGGTACGGTCCGGGTGTTTACGTGATGCCGATGGAACGGCCTCG
GCAGTACGGGCTGGAGGTGGTTCCTACGAACGTGACTGGCACAGCTTCCCCCTCGACCCC
GAGTACCCCACGTCGCTGGCAGCGCCGCGACCGACAGAAGGATACAGCATTTGGATATGA
TTCAGATGACTCCAGTTTGTCTAGCAATGCTTCTAGCTCCAACAAGTCTGGTGAAAAAGG
GGAATGTACGTCTAGCAACCCAGATCACACGGCAGCGGGGAACACGGCCCAGGTTCTGTA
CAACGCGCGGGAGTGGCGCGGCCGGCGGCGGGACGTGAGGCCGCAGCGCCGACTCGCACC
AGAGCGGTTCTTTAAGGCCACCTATCCCTTTCAAGTTAAGTTCACACCGGATGACCTTTT
AAATGGGTCCAAGTACGACACCCTGTCGCAGGAGATCTGGGACAAGTTCGTCAAGTCGCA
GCAGACTGAGGAGACCTTCCGGAAGAAGATGAACCTTTGGAGATATCTATATGTCACTAT
CAAAACGATATTCCCCCGCTACGGGCTGTACGTGGT
(936 bp)

- SilkBase 1999-2023 -