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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28380_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		nucleolar_protein_58_isoform_X2_[Bombyx_mori]
Ontology
GO:0000154 P rRNA modification
GO:0001094 F TFIID-class transcription factor complex binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006608 P obsolete snRNP protein import into nucleus
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0016925 P protein sumoylation
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0031428 C box C/D RNP complex
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0048254 P snoRNA localization
GO:0051117 F ATPase binding
GO:0070761 C pre-snoRNP complex
Transcript
Level		FPKM:14.10 TPM:11.03
ORF EntryO_BomaASG10419_complete:A_BomaASG_c28380_g1_i1
Sequence
(Nucleotide)
GTATTGAAGTGTTGACTTACAGCGACGCGGTAGAGTTGTGTTTGCTAATGAAAATATTTT
TCTGATGAAACTTAATAATATATTAAATGATACTGATTATATTTGTTGAATAGTTGTATA
AGTGTGCTTCCAGTATGTTGGTTCTATTCGAGACACCGGCGGGCTATGCCATATTTAAGT
TGCTGGATGAGTCTAAGCTGAGTGAGATTGACAACTTGTACCAAGAATTTAACACTCCAG
AAGGGGCTTCCACAGTGGTTAAGTTAAAGAACTTTGTAAAGTTTGAGGACACAACAGAAG
CTTTGGCAGCCACTACTGCAGCTATTGAGGGCAAGATATCTAAGCCCCTAAAGAAAGCTC
TTAAGAAGTATGTTTGTAAAGAGGTTCAGGATCAACTCCTTGTCGGTGACTCTAAGCTGG
GAAGTGCCATTAGAGAAAAATTTGACTTACAATGTGTATCAAATACTAATGTCCAGGAAC
TGCTCCGGTGTATTCGCTCACAGATGGACAGTCTCCTAGCTGGACTTCCTAAAAAAGAAA
TGACAGCTATGGCTTTGGGCCTCGCTCACTCTCTCTCGAGGTACAAATTAAAGTTCTCTC
CTGACAAAATAGACACTATGATTGTTCAAGCTCAGTGTTTGCTTGATGATCTTGACAAGG
AACTAAACAACTACATCATGAGGTGCCGTGAATGGTATGGTTGGCATTTCCCAGAGCTTG
GGAAAATCATCACTGATAACACTTTGTTTGTAAAAGTGGTAAAACTCATTGGCACACGAG
ACTATGCATCCAAGACTGATTTATCTGACATTTTACCTGAAGACTTAGAAGAGAAAGTTA
AGGAAGCAGCTGAGATCTCCATGGGAACTGAAATATCTGAAGACGACATTATGAACATAC
AGAATCTGTGTGATGAGATTATTTCCATCACAGACTACAGGACTCATTTAACAGACTACT
TGAAGGCGCGTATGATGGCAATGGCACCAAACCTCACTGTACTCATTGGTGAACACATTG
GAGCACGACTTATTGCTCATGCAGGCTCACTAATGAATTTGGCAAAACATCCTGCTTCTA
CAATACAGATTTTTGGTGCGGAAAAAGCTCTTTTCCGTGCCTTAAAAACGAAGAAAGACA
CACCAAAGTATGGATTGATATATCATGCTCAGTTAGTGGGCCAGTGCAGTACAAAAAACA
AAGGTAAAATGTCAAGAATGTTGGCTGCTAAGGCAGCACTTGCGACTAGAGTTGATGCAT
TTGGAGAAGATGTGTCTTTTGAGCTCGGAGCTGAACATAAAGTGAAATTAGAGAACCGCC
TGCGACTACTGGAAGAAGGAAACCTGCGTAGGATTAGTGGAACAGGGAAAGCAAAAATCA
AATTTGAGAAATATCACAGTAAAAGTGAAGTCTATCAATATCCTGATGCAAGTGATAACA
CAATTGACAAGAAGCCGATCAAGAGAGAACACTCTCCAGATGAAGACCAAGTGTCAGCTA
AAAAGATAAAACTAGAGAATGATGTGTCACTTAAAAATATAAAAACTGAAAACGAAGAAC
CGGCAGAAGACGCGCTCCCTGAACCCAGCTCTGAAAAGAAGAAAAAGAAGAAACGGAAAT
CAGAAGTAAAAACCGAACCAGAACCAGAACCCGAGGCCTCGCTTGAAGAATCCAAGAGTG
AAAAAAAGAAGAAAAAGAAGCGGCAGTCTCAGGCCGATGAGTAGTCCCAGCCCAGTGCGA
GTCGGCGCCGCCCTGCAACAACTTATCTGTCTCCCTTCATACCTCAATACTAATTACATA
TTGTACAAAAGTAATGCCAACACATTTATCGAGTCCGACCCACTGCACAGCTGTGAACTT
GTGAAGTGCTGAAGTGAAGTCATCGTAGTAGATCGGA
(1897 bp)

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