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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28340_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		Small_nuclear_ribonucleoprotein_Sm_D3_[Danaus_plexippus_plexippus]
Ontology
GO:0000387 P spliceosomal snRNP assembly
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0005687 C U4 snRNP
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0034709 C methylosome
GO:0034715 C pICln-Sm protein complex
GO:0034719 C SMN-Sm protein complex
GO:0071208 F histone pre-mRNA DCP binding
Transcript
Level		FPKM:66.74 TPM:52.23
ORF EntryO_BomaASG10368_complete:A_BomaASG_c28340_g1_i2
Sequence
(Nucleotide)
GATGTCTATGGATTTGAAGCGTCTAATTTTTTTGAAATATTCTTTCCCATTTTTATCGTA
AATAATCTAAGAAATAATACTGAATTATTGTCCTTTAACGTACGTTTTTCTCAACTAAAA
CGTAAACATGTCTATCGGTGTGCCTATTAAAGTACTTCACGAGGCGGAAGGTCATGTAGT
GACTTGTGAAACAAATACCGGTGAAGTTTATAGAGGGAAATTAATTGAAGCTGAGGATAA
TATGAATTGCCAAATGACTCTCGTAACAGTCACATACAGAGATGGACGAGTTGCACAGCT
CGAGAATGTGTACATCCGTGGTTCCAAGATCAGATTTTTAATATTACCGGACATGTTGAA
GAACGCGCCAATGTTCAAAAGGCAAGGGAATAAACCTACTGCAGGACGAGGGAAGAGTGC
GATACTGCGAGCCCAAGCTGCTGGTCGAGGACGAGCAGGTGGAAGAGGTGGGGGCCATCG
TGGAGGCTGGCAAGGTGGGTCAGGACCATCTCGACGCTAGCGTTAAGATATTTTTTAGAT
AGCTTAAGTTGTACTTGTCTTATATTTCAATTGTCAAGGAATTATTTCATTATCATTCTT
ATATATTGATATATCTAAGTCAGAAAAATACAAATTTTGGAAATTGAACAACTGTTTGTT
CAAAGATTATTATTATGTTCTCAAATGTAACAATAAGGTCCCGTTCCAGATTTTCTGTTT
ATTGATTTTGGTCACTCTTCAATCTGCTTTACACACCTTAGGTCTCATGGACCATTTGAT
CAAATAGACACTACACACTGATGCTACCCTGTGGTGACTTATTGTGACTCCCAATCAATA
CAATGTTTAATCTCTATTTTCTATCCTTATATCAGTCCCAATAATCTAGAAATCTTGTCC
ATATTATGGGTAATAGTTCAATCTTGTTTTGGCTTGAGGAAATATCTTTGTGTGGTTTAT
GCGGAGGTGACTATTGTAATTAAATATAAAAAGTTATTATAAACTGCCTTGTACAAACCA
AACTTAACCAATGGCCCAGTTTTGACAATGTTTTATCCATATAATTTTAAATTTTTTTGC
ACTGTAACTGGAGCCTATAGACTTTAAGAAGGCCTGCATCTACCATGAGGTTTGAGATCA
AAGTCCCAGTTGTACTGTATGGATAAATACTGTCTTAATGGTCAAAAATAAATCCTGCAG
GCTCACACTATCCCTCCCTACCACCAACAATCATGCATGTTTGTTAAATGTGTGTAACTA
GGCATCTTATCCTTTAGGACACGACAACCTCTTATGCAAAATATTTTTAATTTGAATGTT
TTATGTTCGAATTTAGATTAGTTACAAACAGTGTAACAAGTTTACTGAGACTGTCAGCAG
ATATGTGATAGGATGTGTCGTTGTGGGTGTGAATATCAAAAGATTGAAAACAAATAAAAA
ACAATTTGGAAAATAAAAAAAAAAAA
(1466 bp)

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