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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28296_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		lysine-specific_demethylase_3B_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007596 P blood coagulation
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0046872 F metal ion binding
GO:0046966 F thyroid hormone receptor binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:4.16 TPM:3.25
ORF EntryO_BomaASG10333_complete:A_BomaASG_c28296_g1_i3
Sequence
(Nucleotide)
GTATGACGTGTAGTGTGTTGAACGTTAAGTTTTTAACGTTGTGTAGTTTTCAAAAGTGAA
TAATGTGATTGTGTACTTCGTTATGGCCTATAAATATCGTGAAGATCTAGTTGGCAAACG
ATTTCTCGCAGTGAGTGGTTTAACTAAAATTAATGTGAATAGAGTTTCCGAATGGGGTTG
GAAAGCTGGTGTTATCAGAGCAGCATCACTCAGAGATAACAAGAATAAGGAACTCCAGGT
TTTAGTGGAATACGATGGTGTAGAATGGCAACGACGCGAGTGGGTAGCTGTGTATTCGCG
ACGAACTTTTCGCGTGTTTTTAGTAGAAAGGACTTTAGTTTGGGCTCCCAGAACCGTCGA
GGGAAAAGAAGTGCAATGGCCAGCGTTGACATTCACACAACTTGCAGCTGACCTGACGAT
AGAGGCTGACGCCCAGCCAGTGGAATATTTGCATGACAAGCAGCTCCAATTTATGGACTA
CGCTAATCTACTCCCATATCAGAAATGGGACGCTCACCTCGCCGGTTCAGAGTCCGGTGT
TGAGTCCGTTACTCTGTCAGCTCTGTCTGCTGAAGCGTCAGAGTGGCGGACTTCCCAAGA
CGGCCAGAGAATATTAACCACAACGCCGTCGGTGCTGGGTGGATGTAGAGCTCAGGTATA
CCGCGCCGCAGGAGCCACTCAGTGGTATACGGCGGTCATCGTTGGAGTCAATGAGCATAC
GGGGGAGCTGACAGTTACCGATGACACTGTTTTAGAAGAACATAGCGAAGATCCGTCTCT
AGTTCAAATGAGGCTTCTCGGTGACGGTGTGATAGAATCGATAATGCGAGGAGAAGTTGT
GGGCGTTATGCCGCGGAGATCCCGTTCCAACCTTCAAAGGGTTGAGCGGGAAACAACGAA
AAGTCCAGCAACTACTGGAAACAGGAAGAAAACAGGAACCGTTAGGAGCAACGGCCAGAT
TGCTCAAGTTGAACCTACTCCCCCACCGCCTACAGGATCATCACCGGAACGCGACCCGGC
TGAAATTAGCCAAAAAGGTCCTGAAAATTGTGTCAGTGAAAGTGATGTCGTCAATGTTAG
TGAGGAAACCAAGTGTGTAAAAAAACAAGAGGAAGTGAGCAAATCGGAGGTGTGCGCTAA
AAGTGACAGTGAAGTGAAGAGTGCAGTGAGTTGTGGTGTGGGCGCGGATGGTGTTGCCAG
CGCCGTGGCCTCCGAGGAGGACGACTGTGTGATAGTGTGCGCTCGCGATGCAGACGATCG
GTCCGACTCAGGAGTGAGTGGTGTCCGGTCAGGCGGCTCCGCCAGCTCCGTGGAGGAGCG
GGAGTGGCGAGGTATGGCGCACGGGTACGGCGGAGGACCGCCGCCGCCCTTGCTGCATCT
ACCCGCTCCGCCGCCCCCCTCGCTCTACGCGCCTGAGCTGCTCTGGAAGCAGCGCTACCA
AACCCCGTTACATCCGCCGCTTCATCATGCCATCACCGATGAGTACCTTGCGTATGACAG
AGAGAGACATGAAAGACTGCTACGAGAACGAAGGGAACAAGAGCAACAGATGCTGGAGAA
ACAGCAGAAAGAGAGAAAAGAGAGAGAAAGAATAGAACAGGAGAGAGAAAGAGAACGAGA
GAGAGAGAAACAAGAAAGAGAAGATAAAGAAAGAAGGGAACAAGAAAATGCTGCCTCTAA
ACTTGTTTCGAGGCATTTTGAAGAATCTCTGAGACTAGCCAATCAAAAGAGGGGAGAGCG
GAATAATTTAACATGGTCGATAATGCACAGCTTGACACCAAACCGCGCTGCTCCAGCGCC
AGAACACGATAGGTTACGGGTACCTACGTCGGAACGCAATTATTATTCTCCTCCGGGACA
TCCACCTACGCATCCCACCCATCCTCAACATACATCCACACGGCCACCCGTTTCATCCCC
AGGAGACTACTGCTCCCCACATGCTCGTCTTGTATCTTCCAAGGCTCAAGATAAGAATTC
GTCACATCCAGGCTTACCCAAAGGAGAGCCAAATTTCGCACCTTATAATTATCCTCCATA
CAGAGCCTACGAAAAAATAAAAGATCCACATTTGCCGGCTCCACCGCCACTAGTTTCAGA
GAAAAACACGGTTATAGTAAAACACGATGCAAAACAAATTCATCTCGAGCAAAATCATCA
GTATCCGAGTAAGCCTCGAAATGATCCTTCCCCCCATTACCTTCCTTCTCGAACATATCG
GACGGGGCCTTCGCCTCATGCACCTCCACACCAAACCTTACAGCCGGCTCCGCATACTGC
TGCTTTACCTGCACAGGATAAAAGTGGTCGACGGCTGTATCAGCCGCAACCGAAGCCCCA
GCTGCAACGGTCACCGGCCTACTACGCAGCTGCTCCTCCAGTAAAACCGAAGGTTTCGAG
TCCTGCACCTCCACATATTTACGGAAAACCTAGTAATTCTCAAGTATCCACGCATTATGC
CGTCGCCGTTGAACCACCACCTCCACCGATTGCAAAAGCGGAACCTCCGCCTGTACCATA
TCCGCCACCATCTACGTTCTCGCCGGTGCCTAGAACGTGGCCTCCTCCACCGGCACATTC
GCGAACGCCTGAACCTCGTCCACGGCATGTCGTTGATTCAACCTCGACGTCACCGTGCCA
AACGCAACCTTTAGATTTGGGTGTGCCTAGAGATGATTCCGACCGATTATCCCCTAGAAG
AAGAGCAGCACTCGGTTCGCCATCGCCGTCGGAATCTGATGCGAAACGACGCCGTCTTGA
AGAATCAACAGCACCTCAACCCCTTATAGCTGCAGCAGCAAGTGTAGCACGCGCTTCCGC
TGGGTCTGAACCAGCACCGCTGGCGCCAGGACCACCATGCGACGTGCGTGTACCATCTGC
AGATGGAAGTATCGAAACACCAGAACGCGCAGCGGGTGCTTCACCGGCCCCAAGACATGC
GCTCGCCGCGAGTCCGGCGCCAGCGACACCTGTATCTCCCCTAGTCGCGTCTCCTCTACA
GGCTGCGGCACCGCCACCTGCACCGACTCCTCCTGCACCACCGGCGACACCTCCAGTCTC
TGTAAGTGGCGACGCTGATACACCTGCGAAAGCTGCGTCATCTCCACGTGATGGCTCAGC
TCCAGTGCGGCATCTTGGAAAAAAAGCATGGCTTCAGAGACACGAAACCGCACCAATAGG
AGAGGGAGATTGTTCGGGAGGAGGAGGTACTTGTATAACACTTCCAATGACGATCACGCG
AAATTCAGAGCAGGATGATTCTGGGTCGAACGTTACCGTCCCAGTCGCGGCGAAATCCAT
CCAACGGTCCGTCCGAAAAACTTCCAAACCACGAAAAACAAAGGAGCCCAACGGTCGAGT
AGATGATGTAGAAGAGGACAGTTCCAGCTCTGATCGCGAATCCTCGGCCCCCCCTAAACG
CAAACCTCCAAAGGCAAAACGGAAAAAGAGCAGTGTCGCCCGCAAGATCGGGGATGAACC
GAAACGAAAGAAGGCCGCTGCCGAAAGTGGAAGCGAAAGTGACAAAGAGAGCGATGATAA
AGATTCAGATTCGGGTGGCAGCGGAAGTGGCAGCGGGAGCACGTCGAGTAGACGCGGTGC
TGGTCGAGCGCGTGGTCGCAGGTCCCGGGGCGGCGGCCGGGGCGGACGGCGCCGTGAGGA
ACCGCCTCGCCGCAACGTTGGCAACACGTCCGTCAAACCCCCACAGGACTCTTTTCTGCA
GAGCGGACCGTGTTTCGAGGTTGCTCCGCGTCTCGCCAAGTGTCGCGAGTGTCGCTGGTC
ACCCGCACAGCGAGATAAAGATATGCCGAATATCTTCTGCCGTTTCTACGCTTTCCGAAG
ACTGAAATACGCTAAAAACAGACAGTTGGCTATAGCCGGCTTCTCAGATCCTTACAAGGA
CGCCGAAGAGGAAGATAAGAAGTTATGGTTGTCGTCATCAGCCGGTGCCGCCGAATTAGA
CATTGAGATGAGTTGCTTCCTTTTGAGGGAGATTGGAGACCAGTTCTGTGAACTGCTACA
ACAAGAGAAAGAAGCGGAATCGCACCATTTGAATACTGATAAGACAGTAGCATGGAAACG
TGTTGTACAAGGAGTTCGTGAGATGTGTGATGTTTGTGAGACCACACTTTTTAACTTTCA
CTGGACTTGCGGGAAGTGCGGCTTTGTTGTCTGCCTAGACTGCTATAAGACAAGAACCAC
AACTGAAGCTACCACAAATTCGAGTAGTGAGACAAGTAGTACAAGCAATGTTACCACTAA
CGGAGAAAGAGATTCCTTTGGCTGGTTGACGTGTACAATGGGCGGCCCGCAC
(4312 bp)

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