SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28296_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		lysine-specific_demethylase_3B_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007596 P blood coagulation
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0046872 F metal ion binding
GO:0046966 F thyroid hormone receptor binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:22.49 TPM:17.60
ORF EntryO_BomaASG10330_complete:A_BomaASG_c28296_g1_i2
Sequence
(Nucleotide)
GCGCTACGGAGGCTCTAGTACGTCTGCAAGGCACGACTAAAATTTTCAGTCGTGATAGTG
TAGCTTAACCGAGTGCTGACTGACTACGTTGTGTGTGTGAGTGCAGGTGAACGTATTTTA
CAATTTCCTGGCCGCATTCAAGGACACCTCAGGATAATATCAGGATTCATTAAAACTTCG
CCGTACAATATTTTTGTGAATATCTGTGATACTAACTTTCGTTTAGTTTAAAAGGAAGTT
TTAGTTTTAATTTAACGGAAGATTAATTTGTGTTCGTGTTATTGAAAAGAGTGAAGCTGT
ATAATATTTCAAAATTACTTGGATTCTGGAACTATTTTCCACACTGTCCTGAAAATTGTG
TCAGTGAAAGTGATGTCGTCAATGTTAGTGAGGAAACCAAGTGTGTAAAAAAACAAGAGG
AAGTGAGCAAATCGGAGGTGTGCGCTAAAAGTGACAGTGAAGTGAAGAGTGCAGTGAGTT
GTGGTGTGGGCGCGGATGGTGTTGCCAGCGCCGTGGCCTCCGAGGAGGACGACTGTGTGA
TAGTGTGCGCTCGCGATGCAGACGATCGGTCCGACTCAGGAGTGAGTGGTGTCCGGTCAG
GCGGCTCCGCCAGCTCCGTGGAGGAGCGGGAGTGGCGAGGTATGGCGCACGGGTACGGCG
GAGGACCGCCGCCGCCCTTGCTGCATCTACCCGCTCCGCCGCCCCCCTCGCTCTACGCGC
CTGAGCTGCTCTGGAAGCAGCGCTACCAAACCCCGTTACATCCGCCGCTTCATCATGCCA
TCACCGATGAGTACCTTGCGTATGACAGAGAGAGACATGAAAGACTGCTACGAGAACGAA
GGGAACAAGAGCAACAGATGCTGGAGAAACAGCAGAAAGAGAGAAAAGAGAGAGAAAGAA
TAGAACAGGAGAGAGAAAGAGAACGAGAGAGAGAGAAACAAGAAAGAGAAGATAAAGAAA
GAAGGGAACAAGAAAATGCTGCCTCTAAACTTGTTTCGAGGCATTTTGAAGAATCTCTGA
GACTAGCCAATCAAAAGAGGGGAGAGCGGAATAATTTAACATGGTCGATAATGCACAGCT
TGACACCAAACCGCGCTGCTCCAGCGCCAGAACACGATAGGTTACGGGTACCTACGTCGG
AACGCAATTATTATTCTCCTCCGGGACATCCACCTACGCATCCCACCCATCCTCAACATA
CATCCACACGGCCACCCGTTTCATCCCCAGGAGACTACTGCTCCCCACATGCTCGTCTTG
TATCTTCCAAGGCTCAAGATAAGAATTCGTCACATCCAGGCTTACCCAAAGGAGAGCCAA
ATTTCGCACCTTATAATTATCCTCCATACAGAGCCTACGAAAAAATAAAAGATCCACATT
TGCCGGCTCCACCGCCACTAGTTTCAGAGAAAAACACGGTTATAGTAAAACACGATGCAA
AACAAATTCATCTCGAGCAAAATCATCAGTATCCGAGTAAGCCTCGAAATGATCCTTCCC
CCCATTACCTTCCTTCTCGAACATATCGGACGGGGCCTTCGCCTCATGCACCTCCACACC
AAACCTTACAGCCGGCTCCGCATACTGCTGCTTTACCTGCACAGGATAAAAGTGGTCGAC
GGCTGTATCAGCCGCAACCGAAGCCCCAGCTGCAACGGTCACCGGCCTACTACGCAGCTG
CTCCTCCAGTAAAACCGAAGGTTTCGAGTCCTGCACCTCCACATATTTACGGAAAACCTA
GTAATTCTCAAGTATCCACGCATTATGCCGTCGCCGTTGAACCACCACCTCCACCGATTG
CAAAAGCGGAACCTCCGCCTGTACCATATCCGCCACCATCTACGTTCTCGCCGGTGCCTA
GAACGTGGCCTCCTCCACCGGCACATTCGCGAACGCCTGAACCTCGTCCACGGCATGTCG
TTGATTCAACCTCGACGTCACCGTGCCAAACGCAACCTTTAGATTTGGGTGTGCCTAGAG
ATGATTCCGACCGATTATCCCCTAGAAGAAGAGCAGCACTCGGTTCGCCATCGCCGTCGG
AATCTGATGCGAAACGACGCCGTCTTGAAGAATCAACAGCACCTCAACCCCTTATAGCTG
CAGCAGCAAGTGTAGCACGCGCTTCCGCTGGGTCTGAACCAGCACCGCTGGCGCCAGGAC
CACCATGCGACGTGCGTGTACCATCTGCAGATGGAAGTATCGAAACACCAGAACGCGCAG
CGGGTGCTTCACCGGCCCCAAGACATGCGCTCGCCGCGAGTCCGGCGCCAGCGACACCTG
TATCTCCCCTAGTCGCGTCTCCTCTACAGGCTGCGGCACCGCCACCTGCACCGACTCCTC
CTGCACCACCGGCGACACCTCCAGTCTCTGTAAGTGGCGACGCTGATACACCTGCGAAAG
CTGCGTCATCTCCACGTGATGGCTCAGCTCCAGTGCGGCATCTTGGAAAAAAAGCATGGC
TTCAGAGACACGAAACCGCACCAATAGGAGAGGGAGATTGTTCGGGAGGAGGAGGTACTT
GTATAACACTTCCAATGACGATCACGCGAAATTCAGAGCAGGATGATTCTGGGTCGAACG
TTACCGTCCCAGTCGCGGCGAAATCCATCCAACGGTCCGTCCGAAAAACTTCCAAACCAC
GAAAAACAAAGGAGCCCAACGGTCGAGTAGATGATGTAGAAGAGGACAGTTCCAGCTCTG
ATCGCGAATCCTCGGCCCCCCCTAAACGCAAACCTCCAAAGGCAAAACGGAAAAAGAGCA
GTGTCGCCCGCAAGATCGGGGATGAACCGAAACGAAAGAAGGCCGCTGCCGAAAGTGGAA
GCGAAAGTGACAAAGAGAGCGATGATAAAGATTCAGATTCGGGTGGCAGCGGAAGTGGCA
GCGGGAGCACGTCGAGTAGACGCGGTGCTGGTCGAGCGCGTGGTCGCAGGTCCCGGGGCG
GCGGCCGGGGCGGACGGCGCCGTGAGGAACCGCCTCGCCGCAACGTTGGCAACACGTCCG
TCAAACCCCCACAGGACTCTTTTCTGCAGAGCGGACCGTGTTTCGAGGTTGCTCCGCGTC
TCGCCAAGTGTCGCGAGTGTCGCTGGTCACCCGCACAGCGAGATAAAGATATGCCGAATA
TCTTCTGCCGTTTCTACGCTTTCCGAAGACTGAAATACGCTAAAAACAGACAGTTGGCTA
TAGCCGGCTTCTCAGATCCTTACAAGGACGCCGAAGAGGAAGATAAGAAGTTATGGTTGT
CGTCATCAGCCGGTGCCGCCGAATTAGACATTGAGATGAGTTGCTTCCTTTTGAGGGAGA
TTGGAGACCAGTTCTGTGAACTGCTACAACAAGAGAAAGAAGCGGAATCGCACCATTTGA
ATACTGATAAGACAGTAGCATGGAAACGTGTTGTACAAGGAGTTCGTGAGATGTGTGATG
TTTGTGAGACCACACTTTTTAACTTTCACTGGACTTGCGGGAAGTGCGGCTTTGTTGTCT
GCCTAGACTGCTATAAGACAAGAACCACAACTGAAGCTACCACAAATTCGAGTAGTGAGA
CAAGTAGTACAAGCAATGTTACCACTAACGGAGAAAGAGATTCCTTTGGCTGGTTGACGT
GTACAATGGGCGGCCCGCAC
(3620 bp)

- SilkBase 1999-2023 -