SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28216_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		peptidoglycan-recognition_protein_SC2_isoform_X1_[Bombyx_mori]
Ontology
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0008270 F zinc ion binding
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0016787 F hydrolase activity
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0045824 P negative regulation of innate immune response
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.10 TPM:1.65
ORF EntryO_BomaASG10232_complete:A_BomaASG_c28216_g1_i2
Sequence
(Nucleotide)
GCCTTAGAGACGTATTAAGGCAATTTAGTGAGTACTTGATTCGAAAAATTTAAAGTGCTA
GCCATGAAGAGTGATGGTGATGAAAATCCTAAACACGAGACGAAAAGCCCGCCTCCTATC
AGCTCTGACGTAGCTGTAGTGGACGACAGAATAATGGCAGTTGCAACACAAGCTGCGAGT
TCGACGCCTATATCACAACTCAATGTAACAAAGTCGTCACGGATCCATATCGGACCCAAG
TTCATATCAGTAACTCAAACCGTCAGGAATACAGAAGAAATCAAAGGCCAAATACTCGGT
CAGGAGCTGATATCATCTAAGAGCACACGCAAACTCCGCTGTAGTATCGCCGTGTTTGTT
TGCTGGACGCTCATTGTCACATTAGGACTGGGCTTCTACATATCACACTACGCGCTATCC
AAGCTCACACGTCTCGATCTAGATATACACGAGCCTTGGTATCTTCGTCGAAGTGACTGG
CAAGCGATGTCGCCATACTCAGTGGACTTCCTCGATTTACCCCTATCCTTCGTCATAGTT
GGTCACAGCGCTACCAACTACTGTACTGAAAAGTACGAATGTATTAAGGAAATGTTGGAT
GTGCAGAAAAGCCATTTGCATCGCGGATGGCAAGATATCGGTCCCAATTTCCTCGTGTCT
GGTAACGGGATCGTATTTGAAGGCAGAGGCGCTAATGTGTTCGGTGCAATGGCGATAGCT
TGGAACCGCAGAAGCATACTGATCATGTTCCTCGGGGATTATACAAAGGATAAGACGACA
CCTGTACAGTTTGAACACTTAAATATCGTCTTAGATCAACTTGTAAAACAGGGAGTCTTG
CGATCTGATTACACTTTGTATGGCCAATGCCAGGTAGCGTCGCTCACTATAAGTCCTGGA
CCTAACGTTATACGTGAGCTACATAATTTGAAGCACTGGAGCTCTGAAAATAGCAGTCTT
TGTCTCCGGGGTTAAGGCTGGCTAATAATGGCGTTTAGAATTAACTCGTGTGACAGTATC
TTATCAGTAACCAGCAGAAAAACTTTCTGCGCATACGGGAATGTAAG
(1067 bp)

- SilkBase 1999-2023 -