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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28189_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		probable_nucleoporin_Nup58_isoform_X1_[Bombyx_mori]
Ontology
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0006405 P RNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0015031 P protein transport
GO:0017056 F structural constituent of nuclear pore
GO:0034398 P telomere tethering at nuclear periphery
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
Transcript
Level		FPKM:10.79 TPM:8.44
ORF EntryO_BomaASG10196_3prime_partial:A_BomaASG_c28189_g1_i1
Sequence
(Nucleotide)
GCTCAAGCAACGACTTGTCTTGATCACTCTGTGTTATTATTAACAGGCCTTACTGGCTTT
AGTTCAAATTTAAATCACTTGAAGAATGATATGTGAATAACTGAAAAGTGCTGAAATTAG
CAAAGATGTCTTTCTCGTTCGGCACACCTTCAAGTGCTCCTGCTACCACAGGACTCGCAG
GAGGTTTTAGTTTCGGTACCAACAAACCTGCAACCCCAGGATTTGGCATGACTGCAACAT
CTCAGCCATCAACAGGCCTTTTTGGGAGTACATCTGCTACTCCAGCGCCCGCATTTGGTA
GTGCAGGTTTTGGTTCGACAACACCGGCATTTGGTTCGACTACTACACCTGCTTTCGGTG
CATCAACCACTCCGGCCTTTGGTACAACAACTAATCCAGGTTTTGGTTCAACACCTGCTT
TTGGAGCTAATTCTGCAGCTCCAGTATTTGGAACCACTACACCGGCCTTCGGCTCAACAG
CTCCTACTTTTGGCACAGGCACTTCAGCATTTGGGACGACTACAACACCGGCTTTTGGTA
CAGGCACTGCTGGGTCAAATTTTAGCCTTGGATCAAATACTTTAGGTGGTTTTGGGACAC
AGCCAGCTACTACATCAACTACTGGGTTGGGTCTGAGTTTTGGTCTTGGTACAGCAACTA
CTCAAACAGGGTTTGGACTATTGGGAGCCACTGGCACGGCCACTACATCTAGTAGTTTAT
TTGGACCTAAGCTTGGTACAACCAGTCTAACTGGTACTCAGCCATCGACATTAGGGACAT
CAAGCTTCGGCCTTGGAGGAGTTGCACCGGCTACAAGTGGTATTGGTGTGACGAATACTA
CAGATGCTAAAACTGAGCCACCAAAGCAAACCAAGCTGCCAAATGAGATTTCAACAACAG
TGGATTCATTCAAAGAATTTGTCAAGAAACAAAAGTCTCTGAGTTCTGAAGTTATGCGAG
TGTCTATCAAGCCACTGCATAAGGTGGCGGGCGAGGCGG
(999 bp)

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