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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28173_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		U11/U12_small_nuclear_ribonucleoprotein_35_kDa_protein_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000243 C commitment complex
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005689 C U12-type spliceosomal complex
GO:0017069 F snRNA binding
GO:0071011 C precatalytic spliceosome
Transcript
Level		FPKM:11.24 TPM:8.79
ORF EntryO_BomaASG10173_5prime_partial:A_BomaASG_c28173_g1_i1
Sequence
(Nucleotide)
CTAATTAAAAATACGTACCTACCTAGGTACCTATGGCATGTGTGAAACTAAGTAAATAAG
TATATAACTAAGTTTTAAAATTAATTAAATTGTAATATGTTATTAAATAGCTGCTATAAC
TATGACTAGGTGACTCCACTGACTACAACTAAACAAGAGTCAATAATTTTTTTAATCAGT
TTCACTTCAGAAATATATGTTTTTCATTTTACTTTGATATAAAAGTAGAAAATGACCAAG
GACGGCGAAACAGATTTTAAAAAATATGCCACAGAATACGATCCAATAAAAATTGGTTCT
ATTGATGGTACAGACGTAGAGCCTCATGATCGAGCAATATTACGTGCTATTTACTCTGAA
TACATCCCCAATAAACGGGTAAAAGGAAACCCAAATCATACCATCTTTATAGGGAGACTT
AACCCTAGGACACCACAGGAAACTATCGAATCGGAATTTTCAAAATTCGGTAAAATCATT
CACTGTCGTCTCGTAAGGGATCTTGTCACAGGAAAATCGAAGCAGTATGCTTTTGTAGAA
TATGAAAAGTACAGTTGTATGGAAAAGGCACTAAGAGAGATGCACTTAGAATACATAGAT
GGTTCAGAGATAATTGTAGAGCGGGAAGCTGAACGACGACTTCCTGGATGGAAGCCTCGA
CGCTTAGGCGGTGGGTTTGGTGGCCGCAAAGAATCAGGACAGTTAAGGTTCGGCTGTAGA
GATAGACCTTTCCGGAAACCATACAATGTAGGAAACAAAATTGAGTCTGATTCAAAAGCT
GAGTGGTAAAATGAATAATTATAAACCAATGTAGGAAACAAAATTAAGTCTGATTTAAAA
GCTAAGTGG
(849 bp)

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