SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28090_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		cullin-4A_[Bombyx_mori]
Ontology
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0031175 P neuron projection development
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031465 C Cul4B-RING E3 ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0035518 P histone H2A monoubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045732 P positive regulation of protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0070062 C extracellular exosome
GO:0070914 P UV-damage excision repair
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
Transcript
Level		FPKM:27.38 TPM:21.42
ORF EntryO_BomaASG10052_complete:A_BomaASG_c28090_g1_i1
Sequence
(Nucleotide)
TGGTGGTGAACCCGTAAACTATTGACTGAGCGGAATTATTTTTATTTGTTTTCTAGATAA
TCTAGTTTAGAATTTCATTGTTTAAGTGTAGTGGCTGCGGCCATATCATGCTTGCTTATG
TCGGGATTAGCTGAAACTCCTATTTCTGCCAAAGAAGGCGGTAATCTGTATAAAAAACGA
TCACTGCCTGTCAGCGAATCGTGTAGCAAAAGAGTGAAAATCAACGAAATGAGCGCAGAG
GAGAAAATATCAAATTTTTCGCTAGTGAATCCAAATTCTAACGGGATAAAGATGTCGTCA
ACATCAATGAACAAGCCTGGCGTTACTGCAAAAAAGCTGATAATTAAGAATTTCAAAAGT
AAACCGAACCTTCCAGACAATTATCAGGAAACGACATGGAGCAAGCTGCGGGAAGCTGTT
GTCGCCATTCAGACCTCAAAATCGATAGCCTATTCCTTAGAAGAATTATATCAAGCCGTC
GAAAACATGTGTAGTCATAAGATGGCTTCACAACTTTATGTTAACTTAACAAACTTGGTA
GAAGCTCATGTGAAAGCCAACATTGAGCAGTTCTTGTCCGAGAGCATGGACAGACAGGTC
TTTCTAAAGAGGATGGACGACTGCTGGCGAGCTCACTGCCGACAAATGATTATGATTAGA
AGCATTTTTTTATATTTAGACCGAACCTATGTCCTTCAAAACCCTAGTATACATTCAATT
TGGGATATGGGCCTAGACCTGTTTCGTCACCATATAGCAATGAATACACTTGTCCAGACT
CGTACAGTAGATGGCCTCTTATTACTTATTGAACGAGAGCGAGGAGGCGATTCAGTAGAT
ATATCTTTGCTGAAGAGTCTTCTACGTATGCTTTCTGATCTACAAATATATCAGGAAGCA
TTTGAGCATAAATTCCTTCAAGCAACTGAAAGGCTGTACGCTGCAGAAGGACAACGTTTG
ATGAGGGAACTGGCAGTTCCTGAATACCTTGCCCATGTAGAGAAAAGACTTAAAGAGGAG
AATGATCGCCTTTTACATTATTTAGACCCATCAACCAAGTGGCAACTGGTGGTGGTAGTA
GAGAGACAGTTGCTGGGTGAACATGTGGCTGGGATACTCGGTAAGGGCCTGGCTGCATTG
TTGGACGCACCACGATTACATGACCTGGCCACACTCTACACGCTGTTCTCCAGGGTTAAG
GATGGCCTGGCTGAACTGTGTCATCATTTCAATGGTTACATCAAGAAAAAGGGAAGAACG
ATAGTAATAGAGCCAGAGCGAGACAAGACGATGGTAACCGAGCTACTCGACTTCAAAGAA
CAACTGGACCATGTAGTCAACACATGCTTCCAGAGAAATGACAAATTCATATACTCTATG
AGAGAAGCCTTTGAATTCTTTATTAATCAGAGGCAGAACAAACCTGCTGAATTAATTGCC
AAATTTGTGGATCTAAAATTGAGGGCCGGAAATAAAGAGGCAACTGAAGAAGAATTAGAA
CGTCTGCTAGACAAGATAATGGTTTTGTTCCGTTTCATACATGGCAAGGACGTTTTTGAA
GCTTTCTATAAAAAGGATCTAGCAAAGAGATTGCTAGTAGGTAAATCTGCATCGGTGGAC
GCTGAGAAGTCGATGCTTAGTAAACTGAAGCAAGAGTGCGGAGGTGGCTTCACCTGTAAA
CTAGAAGGAATGTTCAAAGATATGGAGCTATCTAAAGATATCAATATTACATATAAGCAG
CACCTATCAGCTAGTACGGAGACGAGCGGTCCTGGCGGCGTAGAGCTGTCCGTTCACATC
CTGACGATGGGCTTCTGGCCGACGTACCGCGCCTGCGAGGTGCGCCTGCCCACCGAGCTG
ACGCGGCAGCAGGAACACTTCACCAAGTTCTACCTCGCGAAGCACTCGGGTCGGAAACTG
CACTGGCAACCCACGCTCGGACACTGCGTGCTCAGAGCTAACTTCGCACAGGGTAACAAA
GAGCTACAGGTTTCGTTATTCCAAGCTCTGGTCCTGTTATTGTTCAACGATGGAGACAAT
CTCTCTTTTGAAGACATTAAGGTTTCCACCAATATAGAGGAGGGAGAGCTCCGCCGCACG
CTGCAGTCCCTGGCGTGCGGCAAGGCGCGCGTGCTGAGCAAAGCGCCCCGCGGTCGGGAC
GTGCAGGACCTCGACCACTTCTCCTTCAATGCGGACTTCACCAACAAGTTGTTCCGGATC
AAAATCAACCAGATACAGATGAAGGAGACGAGCGAGGAGCAGAAGGCGACGGAAGAGCGC
GTGTTCCAAGACAGGCAGTACCAAATCGACGCGGCCATCGTCCGGGTCATGAAGATGAGG
AAAGCGCTCTCGCACAACCTCCTCATATCCGAACTGTACAACCAGCTCAAGTTTCCGGTT
AAGCCCTCCGATCTAAAGAAGCGCATAGAGTCCCTGATCGACCGCGACTACATGGAGCGC
GACAAGGACAACCCGAACCAATACAACTACGTGGCGTAACAGCAGTCCAGCGACGTCGCT
TTAACGAAAATATTATTTATTTAAAACGGTTATTGTGTCTGCGGGCACCTTCCCCCAACC
CCCCCCCCCATGCACGCCACCCGCAGCGCGCACTCGCCGCGAGTGGTTAGCCAGGCCATA
CACAGCTCCAGTCAACAACTTCTGCACTAATCTTTAAGAAAAAAATTATATGTATATACA
TATTATATAAATAAATATAAAAAATAACGTATTTTACGCACGACGGAATAACTATAATTC
ATTTTCTCCTAAAGTCACAAACCGTACAGTTATTTGTCCTGTGTGCCCCGCTTCTGACGA
TCCCTTTATGGCCTTTAGTGATTGTGGTTAAAACTTTGAAGTGCAGAAGTTGTCCGCTGT
CAGCTGTAAATGTCCCTCTATCTTTGTTTGTGAATAATTTGATATTTCTGTCCGCTGAAC
ACATATAACGGTTGAAACAGTTTCGAGTCGTGTTGTCCGTAACTCCTACTTCCAACGTCT
TGTTTTTCAGCAAACCCCGAAAAAGTGGTGAAAAGTGTGCAGCAAAAATGTTAAAAATAC
ATTAATAATAAAACTTTTTTTTACCAAAAAAAAAAGATCGG
(3101 bp)

- SilkBase 1999-2023 -