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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28088_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		DNA_repair_protein_RAD51_homolog_4_isoform_X3_[Bombyx_mori]
Ontology
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000707 P meiotic DNA recombinase assembly
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0010212 P response to ionizing radiation
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0036297 P interstrand cross-link repair
GO:0042148 P strand invasion
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051726 P regulation of cell cycle
Transcript
Level		FPKM:1.75 TPM:1.37
ORF EntryO_BomaASG10050_3prime_partial:A_BomaASG_c28088_g1_i3
Sequence
(Nucleotide)
TCCGACTATATGTCACGTGTTCATAAGTATAATAAAGTTTTATGAAATGTTTGGAAACAG
TGCAATTTCAGAAGGAGAAAAAGGTCCTTAACTTAATAAGAATTTTTATACATTGAATAA
AATATCCTTACGACCTAATATAGACCAAATACTACAACAACATATAGTTTTATTTCATAG
TGAAGACGGTGTATCAAGATTTAAAATTAAATAGTTTAGATAATATGCTCAATAGAGGAA
TCCCAGCTAAGACGATTACAGAATTATGTGGAATAGCAGGCTCAGGTAAAACACAGTTAG
CCCTACAAATAGCTATTAATTGTGCAAAAGAGACTCACAAAACAGTGTTGTATATTGACA
CCAAAGGGGATTTCTCAGCTCTTAGAATTCAAAAGATATTAGAAAAATGTCAATACTCTT
TTAAGGAAATTGCAGCCATAATGAATAGAATTCACATAAGCTATATTTGGACAATGGAAG
AACTGGTGAACTTGTTTAAAAACCTGAAGAATGGAGAATTAGTAATAGATAATTTGGTGT
TGCTGGTCATAGACTCTTTACCTTCCCTGATGTTTCAATATCTTGGTGAAGATAATAAAC
TAGGTTTATCATTATTAAATTCATTTGTGAATTATAGTCGGTTTATATGCAAACAGCTGA
ATATAGGAATAATCTGTATAAACATGCAAACAAGATGGGTGGATCAGGATTTAACAGATG
TGGAAGATGAAGAAAATTCCACTGCGTACAAGGACTCTTTTACAGAAAAACGGTACCGTT
GCTTAGGAAGGTACTGGCAACACATACCTACATTAGTGCTTGAACTGGAAAAAATAAAAG
AAAATGATAATGAAAACAACTCGGGAGATCGGAAGAGCGTC
(881 bp)

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