SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c13195_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		proteasome_subunit_alpha_type-1_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0001530 F lipopolysaccharide binding
GO:0002376 P immune system process
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0002862 P negative regulation of inflammatory response to antigenic stimulus
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005839 C proteasome core complex
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0019773 C proteasome core complex, alpha-subunit complex
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:48.76 TPM:38.15
ORF EntryO_BomaASG1864_complete:A_BomaASG_c13195_g1_i1
Sequence
(Nucleotide)
CTGCATAGACTAAACTTAGTCTGCTTGTATGGTAAACTATATTTTTCTTTCGCCGCTACA
TTAATTTTATGAAATTAATTCATAGTAGAAATTGTACTTTTCTAAATTAAATAAAACTTA
AAATGTTCAGGAACCAGTACGATAGCGACGTCACAGTATGGAGTCCTCAAGGCCGTCTCC
ATCAAGTGGAGTATGCAATGGAAGCTGTGAAACTTGGTTCTGCAACCATTGGTCTGAAGA
ATAAGGACTATGCGGTGTTGATAGCGTTGAAACGCGCTGTGAGCGAATTGTCCGCATATC
AGAAGAAAATTATTCCTATTGATGAACATATTGGAATTTCTATATCAGGTCTTACTGCAG
ATGCTCGTATGCTGAGTCGCTACATGCGCACAGAGTGTCTCAATCACCGATATTCTCATG
ATGCTCCAATGCCAGTTGGACGTCTCATCTCGTCAGTTGGTAACAAAATGCAGATTTGTA
CCCAGAGATATGACAAGCGACCCTTGGGTGTAGGCTTGTTGGTTGCTGGTTATGATGACC
AAGGACCTCATATTTACCAGACTTGTCCGTCAGCCAACTACTTTGATTGTCGTGCGATGG
CAATCGGAGCACGTTCGCAGTCAGCGCGTACCTATCTTGAGAAGCATCTCAATACATTCA
TGGATTGTGACCTTCAAGAGCTAGTAGCTCACGGTCTTAGAGCCCTACGGGATACGCTGC
CAAATGAAGTTGATCTAAACACAAAGAATGTTTCTATATGTATCGTCGGTCCCAAGACTC
CGTTGCGTATATGCGATGAGGAAGAGTTATCTCGTCTGTTAGCTCTGGTTGAGGGTGAAG
AGAGACGCGGCGGCACCGCGACCGGCGACGCGGGCGCTCCGGGAGGCGCCGCCCCGCGCG
ACCAGGGGGACGACCGGGACCCACAAGCGGCGGTGGCAATGGAAACGGAGTAACTTCAGA
GCGACTCCAGAGCTCCGCAGATGACGGTGTGAACACGGATACAATATATCCGGTAACATT
CAAAAATTATGCACGCCGGTTCACTGCGGACGTTCATCTACCTTCTTTTGTTTTTTCTCT
TAAAGGAATGCCTTGGCCAGTGCTCGGATTAATTGCAAATTTTTGACTTGAGGTATTATT
GTAACATAATTAGTAACATTGTGGTTTATTTTCATGAAATAAAATAAATAATAGTTAAAA
AAAACAATAAACGCGCTTTATATAAAATTCAACTAAA
(1237 bp)

- SilkBase 1999-2023 -