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Last updated: 2022/11/18
 
NameKWMTBOMO02751
chromosome
/Scaffold_id
Bomo_Chr5 (Genome browser)
vs nrPREDICTED:_LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0006351 P transcription, DNA-templated
GO:0005665 C RNA polymerase II, core complex
GO:0006366 P transcription by RNA polymerase II
Protein Structure
Expand view
Expression Level
InterproscanInterproscan result page
Sequence
(Amino Acid)
MATANDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGIRFPETMEGGRPKLGGLMDPRQGV
IDRSSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKLLVSPTNP
KIKEVIMKSKGQPRKRLTYVYDLCKGKNICEGGEDMDIGKEGEEGKRGSGHGGCGHYQPS
IRRQGLELTAEWKHANEDTQEKKIFVSAERVWEILKHITDEDSFILGMDPNFARPDWMIV
TVLPVPPLCVRPAVVMFGSAKNQDDLTHKLADIIKANNDLEKNEQSGAAAHVLAENIRML
QFHVATFVDNDMPGMPKAMQKSGKPLKALKARLKGKEGRIRGNLMGKRVDFSARTVITPD
PNLRIDQVGVPRSIAQNMTFPELVTPFNLDRMQELVRRGNAQYPGAKYIVRENGERIDLR
FHPKSSDLHLLYGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTK
RDVFLTKEQVMNLLMFLPTWDGKIPQPCILKPQPLWTGKQIFTLIIPGPVNMIRTHSTHP
DEEDDGPYKWISPGDTKVVVEHGELLMGILCKKSLGASAGSLLHICMLELGHETAGRFYG
NIQTVINNWLLLEGHSIGIGDTIADPQTYQEIQRAIVKAKDDVIEVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVAGSKGSNINISQVIACVGQ
QNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDT
AVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLAGETVEFQNLPTVK
LSNKAFEKKFKFDSSNERYLKRIFSEDIVRELTESGSVIADLESEWEQLSKDRETLRQIF
PTGESKVVLPCNFKRMIWNAQKTFHINKRIPTDLSPIKVIKGVSDLLKKCVIVAGDDRLS
KQANENATLLFQCLVRSTLCTKFVSEEHRLSSVAFEWLIGEIEARFQQAQVNPGEMVGAL
AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAARD
AEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPAKISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNNEESKFQ
DHDEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIAKVYMHLPQTEAKKRITITEQGEFK
AIAEWLLETDGTSLMKVLSERDVDPIRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQFY
GLYVNYRHLALLCDVMTAKGYLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAEVD
PMRGVSENIIMGQLPRMGTGCFDLLLDGEKCKEAMGGLGGAEVGMYFGVGTPSMSPLMTP
WSTQNTPGYGSSVWSPCQVGSSMTPGGPSFSPSNASDASGLSPAYSNAWSPQPGSPGSPG
PPLSPYSSPAGASPSYSPSNPVYAPASPSITPTSPHYSPASPSYSPTSPNYSPTSPIYSP
TSPSYSPTSPGYSPTSPLYSPASPRYSPSSPNYSPASPAYSTTSNFPTTSPNYSPSSPSY
SPTSLSYSPTSPGYSTSPGYSPSSPRYSPNSPVYSPTSSNYSPSSPNYTSGSVYSPTSPT
YSPTSRSYSPSSPSYSQSSPNYSPSSPNYSPTSPSVAGGSPTYSPTSQQYSPTSPQYSPT
SPGYSSTSQHPSSTRIIKIFPDIAYFYSYFSQLFSELSCVFFHWWTIYLFSNFTNIFIYF
TQL
(1863 a.a.)
Sequence
(Nucleotide)
ATGGCGACGGCGAATGATTCTAAGGCGCCTTTGCGTCAAGTAAAAAGAGTACAGTTTGGA
ATACTATCCCCAGATGAAATTCGACGCATGTCAGTTACTGAGGGAGGGATTCGATTCCCG
GAGACCATGGAAGGTGGAAGACCGAAGCTTGGCGGTCTTATGGATCCTCGACAAGGGGTA
ATTGACAGAAGCTCACGGTGTCAAACGTGTGCTGGGAATATGACAGAATGTCCAGGACAC
TTTGGGCACATTGATTTAGCTAAACCAGTTTTCCATATTGGTTTCATAACAAAAACAATA
AAAATACTCAGATGTGTATGCTTTTATTGTTCAAAGCTGCTTGTCAGCCCTACAAATCCA
AAGATAAAAGAAGTTATAATGAAATCCAAGGGCCAACCCCGCAAACGGTTGACCTATGTT
TATGATCTGTGCAAAGGAAAAAATATATGTGAAGGTGGTGAAGACATGGATATTGGGAAA
GAAGGTGAAGAAGGTAAAAGAGGATCTGGTCATGGTGGTTGTGGGCATTATCAACCCTCT
ATTAGACGACAAGGTCTAGAGCTCACAGCTGAGTGGAAACATGCTAATGAAGATACACAA
GAAAAGAAAATTTTTGTCTCTGCAGAAAGAGTATGGGAAATTTTGAAACATATAACAGAT
GAAGATTCATTTATTTTGGGTATGGATCCAAATTTTGCAAGACCAGATTGGATGATTGTG
ACGGTTTTGCCTGTCCCTCCATTGTGTGTTCGTCCAGCTGTTGTTATGTTTGGCTCTGCC
AAAAATCAAGATGACTTAACCCACAAGCTAGCTGATATAATAAAAGCTAACAATGACTTG
GAAAAAAATGAGCAGTCTGGAGCTGCTGCTCATGTCCTTGCAGAGAATATAAGAATGTTA
CAATTTCATGTTGCTACTTTTGTTGACAATGACATGCCTGGTATGCCAAAAGCTATGCAG
AAATCTGGGAAGCCCTTAAAGGCTCTCAAAGCCAGATTGAAAGGAAAAGAAGGAAGAATT
CGAGGAAATCTAATGGGGAAACGTGTTGACTTCTCAGCTAGGACAGTAATCACACCTGAT
CCAAATTTACGTATAGATCAAGTTGGGGTTCCCAGATCAATTGCTCAAAATATGACATTC
CCAGAGTTGGTGACTCCATTTAATCTTGATAGAATGCAAGAACTTGTCCGAAGAGGAAAT
GCACAATACCCTGGGGCAAAGTACATTGTAAGAGAAAACGGAGAAAGAATTGATTTAAGA
TTCCATCCTAAATCTTCAGATTTACATTTACTCTATGGTTACAAAGTAGAAAGACATCTA
AGAGATGATGACCTTGTTATATTTAATCGTCAACCAACTCTTCACAAAATGAGTATGATG
GGTCACAGAGTTAAGGTACTTCCTTGGTCAACGTTTCGTATGAATTTGAGTTGCACATCA
CCTTACAATGCTGATTTTGATGGAGATGAAATGAATTTGCATGTTCCTCAATCAATGGAA
ACAAGGGCTGAAGTTGAAAATATTCATATAACACCTAGACAAATTATAACTCCACAGGCT
AATAAACCTGTAATGGGTATTGTGCAGGACACATTGACTGCCGTTAGAAAAATGACTAAG
AGAGATGTTTTTTTAACAAAAGAACAAGTAATGAATCTTCTTATGTTTTTACCTACATGG
GATGGTAAAATTCCTCAACCTTGCATTTTGAAACCACAGCCTTTATGGACAGGTAAACAA
ATATTCACTTTAATAATACCTGGTCCTGTTAATATGATTCGAACTCACTCTACTCATCCT
GATGAAGAAGATGATGGTCCTTACAAGTGGATTTCTCCAGGAGATACCAAAGTTGTTGTA
GAACATGGAGAACTACTAATGGGTATTTTGTGTAAAAAGTCGCTTGGTGCATCTGCTGGC
TCTCTGTTGCATATTTGCATGTTGGAATTAGGCCATGAAACTGCTGGACGATTCTACGGT
AACATTCAGACTGTCATTAATAACTGGCTTCTGTTGGAAGGTCACTCAATTGGTATTGGT
GACACTATTGCTGATCCACAGACATATCAAGAAATTCAGCGTGCAATCGTAAAAGCTAAA
GATGACGTAATAGAAGTCATTCAGAAAGCCCACAATATGGAATTGGAACCCACACCTGGT
AATACACTAAGGCAGACCTTTGAAAATCAAGTGAACCGTATCCTCAATGATGCTCGTGAT
AAAACAGGTGGATCTGCTAAGAAATCATTAACAGAATACAATAATCTCAAAGCTATGGTA
GTTGCTGGCTCGAAAGGTTCAAACATTAATATTTCACAAGTCATTGCTTGTGTAGGCCAA
CAGAATGTTGAAGGAAAACGAATCCCATTTGGATTTAGAAAACGCACCTTACCCCACTTT
ATTAAAGATGATTATGGTCCTGAATCCAGAGGTTTTGTTGAAAACTCTTATCTAGCTGGT
CTGACTCCTTCAGAATTCTATTTTCACGCCATGGGTGGACGTGAAGGTTTAATTGATACT
GCTGTAAAAACTGCTGAAACTGGATACATTCAACGGCGTCTCATTAAAGCCATGGAGTCT
GTAATGGTCCACTATGATGGTACAGTTAGAAACTCTGTTGGACAACTTATTCAATTGAGG
TATGGTGAGGACGGTCTCGCAGGAGAGACAGTAGAATTCCAGAACCTGCCGACTGTTAAA
TTGTCAAATAAAGCATTTGAAAAGAAATTCAAATTTGACTCTTCCAATGAGAGATATCTG
AAGAGAATTTTCAGTGAAGACATAGTCAGAGAGCTAACAGAATCTGGAAGTGTCATAGCT
GACCTTGAAAGTGAGTGGGAACAACTTTCTAAAGACAGAGAAACATTACGTCAGATTTTC
CCAACGGGAGAATCTAAGGTTGTATTGCCATGTAATTTCAAGAGAATGATTTGGAATGCT
CAGAAAACATTCCACATAAACAAGAGAATACCAACAGACTTAAGCCCTATCAAAGTTATA
AAAGGTGTATCAGACCTTCTAAAGAAGTGTGTCATTGTAGCTGGTGATGATCGTTTGTCT
AAGCAAGCCAATGAGAATGCTACATTACTTTTCCAATGCTTAGTGAGATCAACACTTTGT
ACAAAATTTGTATCTGAAGAACATAGATTATCTAGTGTAGCATTTGAATGGCTTATCGGG
GAAATAGAGGCAAGATTCCAGCAAGCACAAGTAAATCCAGGTGAAATGGTAGGCGCTTTA
GCTGCTCAATCACTTGGTGAGCCAGCTACTCAGATGACATTGAATACCTTCCATTTTGCT
GGTGTATCATCCAAAAATGTAACACTTGGTGTGCCTCGTCTGAAGGAAATCATCAACATT
TCTAAGAAACCAAAGGCTCCTTCTCTAACTGTATTTTTGACCGGTGGAGCAGCCAGAGAT
GCCGAAAAAGCCAAAAACGTTCTCTGTAGATTAGAACATACAACTTTACGTAAAGTTACT
GCTAACACGGCTATTTATTATGACCCTGATCCTCAGAATACTGTTATTGCAGAGGACCAA
GAATTTGTCAATGTTTACTACGAAATGCCTGACTTTGATCCTGCGAAAATTTCGCCTTGG
TTATTGCGTATTGAACTGGACCGTAAGAGAATGACCGACAAGAAATTAACAATGGAACAG
ATTGCTGAGAAAATTAATGCTGGTTTTGGTGATGATCTCAATTGTATCTTCAATGATGAC
AATGCTGAAAAGTTAGTTTTGCGAATTAGAATCATGAATAATGAAGAAAGTAAATTCCAA
GATCATGATGAAGAGACAGTAGACAAAATGGAAGATGACATGTTCTTAAGATGTATTGAA
GCAAACATGCTGTCTGATATGACTTTGCAAGGCATTGAGGCTATTGCAAAAGTGTATATG
CATTTACCACAGACAGAAGCTAAGAAACGTATAACTATAACTGAACAGGGAGAGTTCAAA
GCTATAGCAGAATGGTTATTGGAAACAGACGGCACATCTCTTATGAAAGTGCTCTCAGAG
CGTGATGTGGATCCAATCAGAACTTTTAGTAACGACATTTGTGAGATATTCCAAGTGCTT
GGAATTGAAGCTGTACGAAAATCCGTCGAAAAAGAAATGAATGCGGTTTTGCAGTTCTAC
GGTCTATACGTGAATTATCGACACTTGGCATTGCTTTGTGACGTCATGACAGCAAAAGGT
TATCTTATGGCCATCACACGTCACGGCATTAACCGACAGGACACTGGTGCTCTTATGAGA
TGTTCATTTGAGGAAACCGTCGATGTTTTATTGGACGCTGCCAGTCATGCTGAAGTGGAT
CCTATGAGAGGAGTATCAGAAAATATTATAATGGGACAGTTGCCGAGAATGGGTACTGGT
TGCTTCGATTTATTACTTGATGGCGAGAAGTGCAAGGAAGCAATGGGCGGTCTTGGAGGC
GCAGAAGTGGGAATGTATTTCGGTGTCGGAACGCCATCTATGTCACCACTTATGACTCCC
TGGTCTACACAGAATACACCAGGATATGGAAGCAGCGTGTGGTCTCCATGTCAAGTTGGC
AGCAGTATGACTCCTGGAGGACCATCATTCTCGCCATCTAACGCATCTGACGCATCAGGA
CTCTCACCGGCATACAGTAATGCTTGGTCACCACAACCTGGTTCACCAGGATCTCCCGGA
CCTCCGCTTTCACCTTACTCGTCGCCCGCAGGAGCGTCACCATCTTACTCCCCATCGAAT
CCTGTTTACGCTCCCGCGTCCCCGAGTATTACTCCAACATCACCACATTATTCACCTGCC
AGTCCTTCTTACTCTCCAACTTCACCCAATTATTCCCCGACTTCACCAATATACTCGCCA
ACATCACCCAGCTACTCGCCAACATCGCCTGGTTATTCGCCCACATCCCCATTATACTCC
CCAGCTTCTCCTAGATACTCTCCGTCATCTCCCAACTATTCACCAGCAAGTCCGGCTTAT
TCAACAACTTCTAATTTCCCGACAACTTCACCTAACTATTCTCCATCAAGTCCTTCGTAT
TCTCCCACGAGTCTATCGTATTCTCCAACGAGCCCAGGTTATTCCACATCCCCTGGCTAT
TCGCCCTCGTCACCTAGATATTCACCAAATAGTCCTGTCTACAGTCCTACTTCATCAAAT
TATTCGCCTTCGTCTCCAAATTACACTTCTGGATCTGTTTATTCACCTACGAGTCCTACA
TATTCACCTACTTCTCGCTCATATTCTCCATCATCACCGAGCTATTCGCAGTCTTCTCCA
AATTATTCACCCTCGTCACCGAATTATTCTCCTACTTCGCCCTCTGTGGCTGGAGGTAGT
CCTACATATTCACCAACAAGTCAGCAATATTCTCCAACCAGTCCACAGTATTCTCCGACT
AGTCCAGGCTATTCTTCTACATCACAACATCCTAGTAGCACTAGGATCATCAAAATATTC
CCCGACATCGCCTACTTTTACTCCTACTTCTCCCAATTATTCTCCGAGCTCTCCTGCGTA
TTCTTCCACTGGTGGACCATCTACCTATTCTCCAACTTCACCAACATATTCATCTACTTC
ACCCAATTATGA
(5592 bp)

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