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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA005232-TA
JBrowseBomo_Chr12
chromosome_No.
Scaffold_id
Scaffold Length		chromo12
Bm_scaf110
1013275 bp
UniRef
UniRef50_Q9Y6J9 (27%/174)
Cluster: TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L; n=19; Euteleostomi|Rep: TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L - Homo sapiens (Human)
Ontology
GO:0000118 C histone deacetylase complex
GO:0003677 F DNA binding
GO:0003702 F obsolete RNA polymerase II transcription factor activity
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
Orthologue
Sequence
(Amino Acid)
MAEQVACELNVEAATNLAEDVSYKLRQTISTIALHSEMMKKSRVDAWDVNTVFMLTDTSP
VAGACGSQYASFGDDNKYCCQIEHLLNVTEFALSTQTYVYCSPPTISVEWIMDDKSLSSS
SNISVQLHNYYTKVARAILNLRKKPKEVAVEDLLTNTRIGPIFPNLFNLAVLVLNDDNLN
ALNVPAKKPLQSNVLDMVDALCSNPCSLDTNIQQQGILYDYLSQGTRDRLTAPMIKCVTA
LGRTALAQCLEDYLDYLDECMQGPRPPPHHGMYMLREAILDASTCLLRSEPTTYLEDYVT
TDYTMYEMLGESILPRRLVFPVSAAVKNDNSPAEKTEEDSVCIPRRPVPRRPKFRLIPST
RTNRSVHRDAVFEPTKFRCDARISINVRACXXXXLPIQTEQES
(403 a.a.)
Sequence
(Nucleotide)
ATGGCAGAACAAGTTGCATGTGAGCTCAACGTTGAGGCCGCTACGAATCTTGCTGAGGAT
GTCAGCTACAAATTACGACAGACCATAAGTACCATAGCCCTACATAGTGAGATGATGAAA
AAGTCACGTGTCGATGCATGGGATGTCAATACTGTGTTTATGTTAACCGACACTAGTCCT
GTGGCAGGAGCATGTGGATCTCAGTATGCTTCCTTTGGAGATGACAACAAATATTGCTGT
CAAATTGAACATCTTCTAAATGTAACGGAATTCGCCCTATCCACGCAGACCTACGTGTAT
TGCTCGCCTCCCACGATATCCGTCGAATGGATAATGGACGACAAAAGTTTAAGCAGTAGT
AGTAATATAAGTGTCCAACTTCATAATTACTACACTAAAGTAGCCAGAGCCATATTGAAC
CTAAGGAAGAAACCAAAGGAAGTAGCCGTCGAAGATCTGCTGACGAACACAAGGATAGGT
CCGATATTCCCGAACCTCTTCAATCTGGCCGTACTGGTGCTGAACGACGACAACCTGAAT
GCTCTCAACGTTCCCGCCAAGAAACCACTGCAGTCCAACGTTTTGGACATGGTGGACGCG
CTCTGCTCTAACCCCTGCAGTCTGGATACAAATATACAACAGCAAGGCATCCTGTACGAT
TATTTGTCGCAAGGCACCCGTGACCGTCTGACGGCGCCCATGATCAAGTGCGTGACGGCG
CTCGGCCGGACGGCGCTGGCCCAGTGCTTGGAGGATTACCTGGACTACTTGGACGAGTGC
ATGCAGGGCCCGCGACCCCCGCCACACCACGGAATGTATATGCTCAGGGAGGCTATACTG
GATGCTTCTACGTGTCTCCTCAGATCTGAACCCACGACGTATTTGGAAGACTACGTCACC
ACCGACTACACCATGTACGAGATGCTGGGGGAGTCTATACTGCCCAGGCGGCTTGTGTTC
CCCGTCTCAGCAGCAGTCAAAAACGATAACTCTCCTGCCGAGAAGACCGAAGAGGATTCG
GTGTGCATTCCCCGACGTCCCGTGCCGAGGAGACCGAAGTTCAGATTGATACCTTCGACG
AGGACCAACCGGAGTGTCCACAGGGACGCCGTGTTCGAACCCACCAAGTTCCGGTGCGAC
GCGCGCATCAGCATTAACGTGCGAGCGTGCNNNNNNNNNNCGCTTCCGATACAGACTGAA
CAAGAATCGTGA
(1212 bp)

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