SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA005055-TA
JBrowseBomo_Chr25
chromosome_No.
Scaffold_id
Scaffold Length		chromo25
Bm_scaf32
4385969 bp
UniRef
UniRef50_Q8GYD9 (37%/203)
Cluster: Probable RNA helicase SDE3; n=5; Magnoliophyta|Rep: Probable RNA helicase SDE3 - Arabidopsis thaliana (Mouse-ear cress)
Ontology
GO:0000166 F nucleotide binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0016787 F hydrolase activity
Orthologue
Sequence
(Amino Acid)
MNCQLCSESNVPSDHHTTERHMKNKTLFDYSVYKKQNVGNKKGIIVSCDVRSSSSTHSQC
YESKINVSVKPNEQVEFTFTILNDTKKDKFSINCAQIMHSKLNFTINDHGIDAGSPPHII
KPKSKLNKKITVMFRSASVGEYVMPIVFCFIMNSTNENIVIVRDMVVYVEKQKKLHDKMY
SPFVLQSIVAEKTYRCVREGKIFSTGITKMNYVQFFHHLLWYEETVLKNNLKNYNMTGVN
LKLGSIPSSYTLVVPGLAEKRPSLLVGDYLFVKPQNEKIMFEANVTLITENDVTIQGMHS
TFFKNYSKTKKYDIRFTMSRVTLERMHQAVHFAEQQMPRLFPTHYTNKKKVEPITEFFNV
NIRDNLEQRSAVEHIVSGSSGRAPYLVHGPPGTGKTVTIVEAILQASPY
(409 a.a.)
Sequence
(Nucleotide)
ATGAATTGCCAGTTGTGTTCTGAAAGCAATGTACCTTCTGATCATCACACTACTGAGAGA
CATATGAAAAATAAGACTTTGTTTGATTACTCTGTATACAAAAAACAGAATGTTGGAAAT
AAGAAGGGTATCATTGTATCATGTGATGTTAGATCTTCAAGCTCCACACATTCTCAGTGT
TATGAGTCAAAAATAAATGTTTCTGTTAAGCCAAATGAACAAGTAGAGTTCACTTTCACA
ATCTTAAATGACACCAAGAAGGACAAATTTTCAATCAATTGTGCTCAAATAATGCATTCC
AAATTAAACTTTACTATCAATGATCACGGAATTGATGCAGGCTCTCCACCACACATCATC
AAGCCCAAATCGAAGCTCAACAAGAAAATTACAGTGATGTTCAGATCAGCGAGCGTTGGA
GAATATGTGATGCCAATAGTATTCTGTTTTATTATGAACAGTACAAATGAAAACATTGTT
ATCGTTAGGGACATGGTCGTTTACGTTGAAAAACAGAAAAAGCTTCACGACAAAATGTAC
AGTCCTTTTGTACTTCAAAGTATTGTGGCAGAAAAGACATACAGATGCGTCCGTGAGGGG
AAAATTTTCAGTACTGGCATCACCAAAATGAACTATGTTCAGTTTTTTCATCATCTGCTC
TGGTACGAAGAAACTGTCCTCAAGAATAATCTAAAGAATTACAACATGACAGGCGTGAAT
CTAAAGCTCGGTAGCATTCCATCGTCGTACACGTTGGTCGTGCCCGGCTTAGCGGAGAAA
AGACCGTCGTTGTTGGTTGGTGATTATTTGTTCGTTAAACCGCAAAATGAGAAGATAATG
TTCGAAGCGAACGTCACTCTAATAACCGAGAATGACGTCACTATACAAGGCATGCATTCA
ACCTTTTTTAAGAACTACTCTAAAACTAAGAAGTACGACATACGGTTCACGATGTCCCGC
GTGACCTTGGAACGGATGCACCAGGCGGTACACTTCGCCGAACAACAGATGCCCAGATTG
TTCCCTACGCACTATACAAATAAGAAGAAAGTAGAACCAATAACGGAATTTTTTAACGTG
AACATCCGAGACAACTTGGAGCAGCGCTCAGCCGTGGAGCACATCGTGTCGGGCAGCAGC
GGGCGCGCGCCCTACCTCGTGCACGGGCCGCCCGGCACCGGCAAGACCGTCACCATCGTC
GAAGCCATCCTGCAGGCGAGCCCATACTAA
(1230 bp)

- SilkBase 1999-2023 -