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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA004963-TA
JBrowseBomo_Chr25
chromosome_No.
Scaffold_id
Scaffold Length		chromo25
Bm_scaf65
2150616 bp
UniRef
UniRef50_O60306 (67%/1074)
Cluster: Intron-binding protein aquarius; n=46; Eumetazoa|Rep: Intron-binding protein aquarius - Homo sapiens (Human)
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
Orthologue
Sequence
(Amino Acid)
MLKFYARFEISDQTGDPMTDRDMTLQHYSKITSLQKAAFSKFPDLRLFALANVASVDTRE
TLQKHFKNLSDKALRAIATYLNLVPPEGKEDETPWHRLDKDFLRELLISRHERRISQLEE
LNLMPLYPTEEIIWDENVVPTEIYSGENCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDIEDAVYRLAPWNSEDGSVYFGGWARMAHPIKSFAVVEVAKPNIGEKAPSRVRADVT
VTLSLRNEIKHEWENLRKHDVCFLVTVRPTQGIGTKYDYRKSMVDQAGIVYVRGCEVEGM
LDASGRVIEDGPEPRPELEGDSRTFRLLLDPNQYRLDLDRASKGNEDVYETFNIVMRRKP
KENNFKAVLETIRELMNTECVVPDWLHDIVLGYGDPGQAHYTRMPNEIATLDFNDTFLNM
DHLRNSFPGYEIKVQTNDPRKLVRPFKLTFENVVRKQQVGDAAMDEDEPRKAIIVEPHVQ
PKRGPYLYNEPKKNNILFTPTQVEAIRSGMQPGLTLVVGPPGTGKTDVAVQIISNIYHNF
PWQRTLVVTHSNQALNQLFEKVAELDVDERHLLRLGHGEEALQTDKDFSRYGRVNYVLAK
RLELLELVSRLQRTLDAGSDAGATCELAHHFHVYHVRPRWRAFLENCQQQTNSIEIVSKE
FPFHEFFDDAPKPLFLRKSHEEDMEIAKSCYRYIDHIFEELEEFRAFELLRSGLDRSKYL
LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR
LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNLY
RWRYRALGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNGVGETEPSPYFYQNLAEAEYV
VAVFMYMRLIGWPAERISILTTYNGQKHLIRDVIDKRCADNPLIGRPHKVTTVDKYQGQQ
NDIALVSLVRTKAVGHVRDLRRLIVAASRARLGLYIFARANLFRNCYELQPTFNQLVERP
LQLELVPGERYPAQRAAGVAVPPELLLSVRDMPHMARYVYDMYLHIVNDAPDARQESGWR
APGGREAARARGAGGHVPAHPGAAPDSDDESDAFTPTDILNEVDEPNAANS
(1131 a.a.)
Sequence
(Nucleotide)
ATGCTGAAGTTTTACGCAAGATTTGAGATTAGCGATCAGACCGGAGATCCTATGACCGAC
CGTGACATGACATTACAGCACTACTCAAAAATCACCTCACTACAGAAAGCCGCATTTTCC
AAGTTTCCTGATCTTCGTTTATTTGCCCTCGCGAATGTAGCGAGTGTCGACACCAGAGAA
ACGTTGCAGAAGCACTTCAAGAATTTGAGTGACAAAGCTTTAAGAGCAATCGCCACGTAC
CTGAACCTGGTTCCTCCTGAAGGAAAAGAAGACGAGACGCCTTGGCACCGACTCGACAAA
GATTTCCTCAGAGAGCTATTGATCTCGCGTCACGAGAGGCGAATTTCACAATTGGAAGAA
TTGAACTTAATGCCCCTGTATCCTACAGAAGAGATTATCTGGGACGAGAATGTAGTGCCC
ACAGAGATATACAGCGGAGAGAATTGCCTAGCCCTGCCTAAGCTGAATCTACAATTTTTA
ACATTACACGACTATCTGTTACGAAACTTCAATTTGTTCCGCTTGGAGAGCACATACGAG
ATAAGACAAGACATTGAAGACGCCGTATACAGATTGGCGCCGTGGAATTCAGAAGACGGA
AGCGTTTATTTTGGGGGCTGGGCGCGGATGGCGCATCCTATAAAGAGCTTCGCAGTTGTC
GAAGTGGCCAAACCGAACATCGGCGAGAAGGCCCCGTCGAGGGTCCGAGCCGATGTCACC
GTCACGTTGAGCCTCAGAAACGAGATAAAACACGAATGGGAAAACCTCAGGAAGCATGAC
GTTTGCTTCCTGGTAACCGTCAGACCTACACAAGGCATAGGTACAAAGTATGACTACAGA
AAGAGTATGGTGGATCAGGCGGGGATAGTGTACGTGAGGGGTTGCGAAGTTGAAGGTATG
CTGGACGCATCCGGCAGAGTCATTGAGGACGGGCCGGAACCGCGGCCGGAGTTAGAGGGA
GATTCCAGGACCTTCAGGCTCTTACTCGATCCTAACCAATACAGACTTGACTTGGACAGA
GCTAGTAAAGGGAATGAGGACGTGTACGAGACTTTCAATATAGTTATGCGTCGTAAACCG
AAAGAGAACAACTTCAAGGCCGTATTGGAAACGATACGAGAATTAATGAACACCGAATGC
GTTGTACCGGACTGGCTTCACGATATAGTCTTGGGCTACGGAGATCCCGGTCAAGCTCAT
TACACGAGGATGCCGAACGAGATAGCTACTCTGGACTTCAACGATACATTCCTGAACATG
GATCATCTGCGGAACAGCTTCCCGGGGTACGAAATCAAGGTGCAGACCAACGACCCAAGG
AAGCTCGTCAGGCCGTTCAAGTTGACTTTCGAAAACGTCGTACGGAAGCAGCAGGTCGGG
GACGCAGCTATGGACGAAGACGAACCCCGCAAAGCGATCATTGTCGAACCCCACGTACAA
CCGAAGAGGGGACCGTATTTGTACAACGAACCAAAGAAGAATAATATACTATTCACTCCG
ACACAAGTGGAAGCTATACGTTCTGGAATGCAACCTGGACTCACATTGGTCGTCGGTCCA
CCTGGAACTGGTAAAACGGACGTGGCAGTTCAAATAATTTCGAACATATACCACAACTTC
CCGTGGCAACGTACCCTGGTCGTAACGCACAGCAACCAGGCCCTGAATCAGCTATTCGAG
AAGGTCGCCGAGCTGGATGTAGACGAAAGGCATCTACTGCGTCTCGGTCACGGCGAGGAA
GCTCTTCAGACAGACAAAGACTTCTCCAGATACGGCCGCGTGAACTATGTGTTGGCAAAG
CGTCTGGAGCTGCTCGAGCTGGTGTCGCGGCTGCAGCGAACGTTGGACGCGGGCTCGGAC
GCCGGCGCTACGTGCGAGCTGGCGCACCACTTCCACGTCTACCACGTGCGGCCGCGCTGG
CGAGCCTTCCTCGAGAACTGCCAGCAACAGACAAACTCGATTGAGATAGTCAGCAAGGAG
TTTCCGTTCCACGAATTCTTCGATGATGCCCCGAAACCCTTGTTCCTGAGGAAGTCTCAC
GAAGAGGACATGGAAATAGCCAAAAGCTGTTACAGGTATATTGATCACATATTCGAGGAA
TTGGAAGAGTTCCGAGCCTTCGAACTACTGAGGTCCGGACTGGATCGGTCCAAGTACCTG
TTGGTCAAAGAAGCGAAAATAATCGCGATGACGTGCACGCACGCCGCCCTCAAACGTTCC
GAATTAGTGCAAATGGGTTTCAAATACGACAACATACTGATGGAGGAATCAGCTCAAATC
CTCGAGATCGAGACGTTCATACCGCTGCTCCTGCAGAACCCGCAGGACGGCAGGTCCCGG
CTGAAGCGTTGGATCATGATCGGCGACCACCACCAGCTGCCCCCGGTCGTCAAGAACATG
GCGTTCCAGAAGTACTGCAACATGGAACAGAGCCTGTTCACCAGAATGGTCAGACTGGGT
GTTCCGTACGTGGAACTGGACGCACAAGGTCGAGCTAGACCCAGCATCTGCAACCTGTAC
CGCTGGCGCTACCGGGCGCTGGGCGACCTGTGCCACGTGACGCAGCTCCCGGAGTACCGC
GCCGCCAACGCGGGCCTGCGACACGACTTCCAGCTCGTCAACGTGGACGACTTCAACGGC
GTCGGCGAGACCGAGCCCAGCCCTTACTTCTATCAGAATTTAGCGGAAGCAGAATACGTT
GTAGCGGTTTTCATGTACATGCGCCTGATCGGATGGCCTGCAGAGCGCATCTCCATACTG
ACCACATATAACGGGCAGAAACATCTCATCAGGGACGTCATAGATAAGCGATGTGCCGAT
AATCCACTCATCGGTCGACCTCACAAGGTGACGACGGTAGACAAGTACCAGGGCCAGCAG
AACGACATAGCTCTAGTGTCGCTGGTCCGTACGAAGGCGGTGGGTCACGTGCGCGACCTG
CGGAGACTCATCGTCGCCGCCTCAAGAGCCCGTCTCGGCCTATACATATTCGCGAGGGCC
AACCTCTTCAGGAACTGCTACGAGCTACAGCCTACATTCAATCAGCTCGTGGAGCGTCCA
CTGCAGCTTGAACTAGTCCCGGGCGAGCGGTACCCGGCGCAGCGCGCGGCGGGCGTGGCC
GTGCCGCCGGAGCTGCTGCTGTCCGTCCGGGACATGCCGCACATGGCGCGCTACGTCTAC
GACATGTACCTGCACATTGTCAACGACGCACCCGACGCTCGACAGGAAAGTGGCTGGCGG
GCGCCAGGCGGGCGGGAGGCGGCGCGTGCGCGGGGCGCGGGGGGGCACGTTCCCGCGCAC
CCCGGCGCCGCGCCCGACAGCGACGACGAGTCGGACGCCTTCACCCCCACCGACATACTC
AACGAAGTCGATGAACCGAACGCCGCGAACTCATAA
(3396 bp)

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