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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA004848-TA
JBrowseBomo_Chr25
chromosome_No.
Scaffold_id
Scaffold Length		chromo25
Bm_scaf46
3255295 bp
UniRef
UniRef50_UPI0000D569A8 (32%/661)
Cluster: PREDICTED: similar to CG14749-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG14749-PA - Tribolium castaneum
Ontology
GO:0005643 C nuclear pore
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
Orthologue
Sequence
(Amino Acid)
MNSTKNSSYDSYNDRLGEILNRSITSKMRDSSIDETLAGFGKLRISALTKAVELSPLVKE
ATIGPNSPAKKELIYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQLHQLSVEF
FRKSFEQMICKRAEIMNKCFQKYSEQRERRDMKYHKRKLQLQKDFHENDNLNVLKIAKLD
EQNNSAMINRQTIDNMNRILEEQNKATARFAAITDSHTKICICYNEITNVIASEPLSQQV
CDKYIPTIKTVISNISAIMELCKNASVTDKEVKQAEILSLNLENVLKKILNEINEIKEKE
RILKDNERELLKLKEIEEKKARELAEKEAQETKVPEVTKTVKIVRPDKTKVKPMFYSSKN
YNYFKELSNFMISYEAQYSDLLENVNMKKFRFDCQKAVNTPVNALSSVSSTHMKDKYEKL
YELLKGESVQVLDIYFTVTQHPHGVAYCTALLAKKIVRQGELLVSSHPEAAFPLAAVVIA
LWASFPDFGKLLLANFHKQCPYLVPMFMPQKEGQTDKEFYLSRGYTYNDEGVVEKQDKFL
KRMSGIFRLICAIWIMSTPKFINIPNPHGLQYGWQWLASFINLKPEPDISATLLYDFFTV
CGSKFLLHYKIQFIKLIKLISTDYXXXXLIKLISTDYLEVLQNIDEGGPKTRLEVLLQNI
LKTGHIDPPSGLLQSDIW
(678 a.a.)
Sequence
(Nucleotide)
ATGAATAGTACAAAGAATTCATCTTACGACAGCTACAATGATAGACTTGGAGAAATTCTC
AATAGAAGCATTACTTCGAAAATGAGAGATTCTAGTATTGACGAAACTTTAGCGGGGTTT
GGCAAATTAAGAATATCAGCCCTTACTAAAGCCGTTGAATTAAGTCCTTTAGTAAAAGAA
GCGACCATAGGACCTAACAGTCCTGCAAAGAAAGAATTAATTTATGAAGAAAAACAAATC
CCCGCCAAAATTGAACCGTTGCCAGAGGACCTTGTTGAAGATAAGCTCCGAGGGGATCTC
GGTTATAATCTCATAATGAAAGAATGTGAAGCACAGTTGCATCAATTATCAGTGGAATTT
TTCAGAAAATCTTTTGAACAGATGATTTGTAAAAGGGCGGAAATAATGAACAAATGCTTT
CAGAAGTATAGCGAACAACGTGAGCGCAGAGACATGAAATACCATAAACGGAAACTACAG
CTACAGAAGGATTTTCATGAAAATGACAATTTAAATGTATTAAAAATAGCCAAATTAGAT
GAACAGAACAACAGTGCAATGATCAACAGGCAGACAATTGACAATATGAATAGAATCTTA
GAAGAACAAAATAAAGCCACAGCTCGATTTGCGGCAATAACTGACAGTCATACTAAAATA
TGCATCTGTTATAATGAAATCACAAACGTAATAGCTTCGGAGCCTCTGTCCCAACAGGTT
TGTGACAAATACATACCGACTATCAAAACAGTCATTTCTAATATTAGTGCTATCATGGAA
CTTTGTAAAAATGCATCTGTTACCGACAAAGAGGTAAAACAAGCAGAAATATTATCTTTG
AACTTAGAAAATGTACTAAAAAAGATTTTAAATGAAATTAATGAAATTAAAGAAAAGGAA
AGGATTTTGAAAGATAATGAAAGGGAATTATTGAAATTGAAAGAAATAGAAGAAAAGAAA
GCTAGAGAGTTGGCTGAAAAGGAAGCGCAAGAAACAAAGGTTCCTGAGGTGACAAAAACT
GTTAAAATAGTTCGTCCTGATAAAACAAAGGTCAAACCCATGTTCTACTCCAGTAAAAAC
TACAACTATTTTAAAGAGTTAAGCAACTTTATGATAAGTTATGAAGCACAATACAGTGAT
TTATTAGAGAATGTAAACATGAAAAAGTTTAGATTTGACTGCCAAAAAGCTGTGAACACT
CCAGTGAATGCATTGTCTTCAGTTAGTAGTACACACATGAAGGACAAATATGAAAAGCTG
TACGAACTACTCAAAGGAGAGAGTGTTCAAGTGTTAGACATATATTTTACTGTAACTCAG
CATCCACATGGAGTGGCATACTGTACAGCACTCTTAGCCAAGAAAATAGTGAGGCAAGGG
GAGTTATTGGTTTCAAGTCATCCTGAAGCTGCATTCCCATTAGCAGCTGTAGTTATAGCA
CTTTGGGCTTCTTTCCCAGATTTTGGAAAATTATTGCTAGCCAATTTTCACAAGCAGTGC
CCTTATTTAGTTCCCATGTTTATGCCCCAAAAAGAAGGTCAAACAGATAAGGAATTCTAC
TTGTCTAGAGGGTATACATATAATGATGAAGGTGTAGTTGAAAAACAAGATAAATTCTTG
AAAAGAATGTCAGGTATCTTTAGACTCATCTGTGCTATTTGGATAATGAGCACCCCCAAA
TTTATAAACATACCTAACCCCCATGGATTACAATATGGATGGCAGTGGCTTGCATCTTTC
ATCAACTTGAAACCAGAACCTGATATATCTGCCACTCTTCTTTATGATTTCTTTACAGTG
TGTGGGTCTAAATTTCTCTTACATTATAAGATACAGTTTATTAAGTTAATAAAATTAATT
AGCACAGATTATTNNNNNNNNNNGTTAATAAAATTAATTAGCACAGATTATTTGGAAGTT
TTACAAAACATTGATGAAGGAGGGCCGAAAACAAGACTGGAAGTACTCTTACAAAACATA
CTGAAGACCGGACACATTGATCCTCCCAGTGGTTTGTTACAATCAGATATATGGTGA
(2037 bp)

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