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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA004821-TA
JBrowseBomo_Chr25
chromosome_No.
Scaffold_id
Scaffold Length		chromo25
Bm_scaf46
3255295 bp
UniRef
UniRef50_UPI0000D569F5 (60%/666)
Cluster: PREDICTED: similar to CG2244-PB, isoform B; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG2244-PB, isoform B - Tribolium castaneum
Ontology
GO:0000118 C histone deacetylase complex
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
Orthologue
Sequence
(Amino Acid)
MEEESTELPGTDGLAPKQRHQAKHRELFLSRHVETLPATHIRGKCTVTLLNETESLLSYL
NKDDAFFYCLVFDPSQKTLLADKGEIRVGSRYQTEVTNLLKEGEEDPRISEELETLVWTP
EHGLTDRQIDQFLVVSRSVGTFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLHKS
GYSIESALSSLVPASGPVLCRDEMEEWSASEANLFEEALDKYGKDFADIRQDFLPWKTLK
NLVEYYYMWKTTDRYVQQKRVKAVEAESKLKQVYIPNYNKPNPALITNNSSGSKSGVLNG
GTNGTPAPQLCASCQVTSSNQWYSWGPQHLQYRLCGTCWQYWKKYGGLKTAGVFSESEAE
TTKSVREPDETALSAPHRPHRCAVLNCAKEFKLRAHLARHVATAHGGEGARPVMKTRAAF
YLRASTYTRLARRLSRTLRRPKHYARSPFSPINLTLLKNDCTAGAEAGSASGAAGAARVR
GPVGAVAARLAAARGVPLSRSATHEWLLLTPKDRMPVPDHVAFPKPPKAPDHLLYERVLS
RGELEARRAEPAPPLKRSAYDDINGLDRVGERSRETLAPPAKRPNKHPAPMQRPSREQYA
AMCARAQATGQPLPPHVFAHVNGKPTNITGRGGRRHVISWMDAPDDLYFRATDAAK
(656 a.a.)
Sequence
(Nucleotide)
ATGGAGGAGGAATCTACCGAATTGCCAGGTACAGACGGCCTGGCGCCGAAGCAGCGGCAC
CAAGCGAAACACCGCGAGCTGTTCCTGTCCAGGCACGTGGAAACGTTGCCGGCGACGCAC
ATTCGCGGCAAGTGCACCGTCACGCTACTCAACGAGACGGAGTCGCTGCTCAGCTATCTC
AATAAGGATGACGCATTTTTTTATTGTTTAGTATTTGATCCTTCACAAAAGACTTTATTA
GCAGATAAGGGAGAAATCAGAGTTGGAAGTAGATATCAGACTGAAGTAACTAATTTATTA
AAAGAAGGCGAAGAGGACCCACGGATCAGTGAAGAATTAGAAACGTTGGTTTGGACACCG
GAGCACGGGCTCACGGACCGACAGATAGATCAGTTCTTAGTTGTGTCGCGGTCCGTGGGC
ACGTTCGCACGAGCCCTCGACTGCTCCTCCAGCGTCAAGCAGCCCTCGCTGCACATGTCC
GCCGCCGCCGCGAGCAGGGACATCACACTGTTCCACGCGATGGACACCCTCCACAAGTCT
GGCTACAGCATAGAGTCGGCGCTGTCGTCGCTGGTGCCGGCGTCGGGCCCCGTGCTGTGC
CGCGATGAGATGGAGGAGTGGTCCGCCTCCGAGGCCAACCTGTTCGAGGAGGCACTCGAC
AAATACGGAAAGGACTTCGCTGATATACGACAGGACTTTTTACCATGGAAAACGTTAAAG
AATTTAGTGGAGTACTACTACATGTGGAAGACGACGGATCGCTACGTACAACAGAAACGC
GTGAAAGCGGTCGAAGCTGAGTCAAAACTGAAACAAGTGTACATTCCCAACTATAACAAA
CCGAATCCGGCGTTAATTACGAACAACAGCAGTGGTAGCAAAAGCGGTGTCCTAAACGGA
GGCACAAACGGCACGCCCGCGCCGCAACTCTGTGCATCATGTCAAGTTACAAGTTCAAAC
CAGTGGTATTCATGGGGACCACAGCATTTACAGTACAGATTGTGTGGTACATGTTGGCAG
TACTGGAAAAAATATGGCGGTCTAAAGACGGCGGGTGTGTTCAGTGAGAGCGAGGCGGAG
ACGACCAAGAGTGTGAGGGAACCTGACGAGACCGCGCTCTCCGCGCCGCACCGGCCCCAC
CGCTGCGCCGTGCTCAACTGCGCCAAGGAGTTCAAGTTACGCGCCCACCTGGCGCGGCAC
GTGGCCACCGCGCACGGCGGCGAGGGCGCGCGCCCCGTCATGAAGACGCGCGCTGCCTTC
TACCTGCGCGCGTCGACCTACACGCGCCTCGCGCGCCGCCTGTCCCGCACGCTGCGCCGC
CCCAAGCACTACGCGCGCTCGCCCTTCTCGCCCATCAACCTGACGCTGCTCAAGAACGAC
TGCACCGCGGGGGCGGAAGCGGGCAGCGCGAGCGGGGCGGCAGGTGCGGCGCGCGTGCGC
GGGCCAGTGGGCGCGGTGGCGGCGCGTCTGGCGGCCGCGCGTGGGGTGCCGCTGTCCCGC
TCCGCCACGCACGAGTGGCTGCTGCTCACGCCCAAGGACCGCATGCCCGTGCCCGACCAC
GTCGCCTTCCCCAAACCGCCCAAGGCACCAGATCACCTGCTGTACGAGCGCGTGCTGTCC
CGCGGCGAGCTGGAGGCGCGCCGGGCCGAGCCCGCGCCGCCGCTCAAGCGCAGCGCCTAC
GACGACATCAACGGACTCGACAGAGTGGGCGAGCGGTCGCGCGAGACGCTGGCGCCGCCC
GCCAAGCGCCCCAACAAGCACCCGGCGCCCATGCAGCGGCCCTCGCGCGAGCAGTACGCC
GCCATGTGCGCGCGCGCGCAGGCCACCGGACAGCCGCTGCCGCCGCACGTCTTCGCGCAC
GTAAATGGCAAACCGACAAACATCACAGGACGCGGCGGCCGCCGACACGTGATCTCGTGG
ATGGACGCTCCCGACGACCTATACTTCAGAGCCACCGATGCGGCCAAGTGA
(1971 bp)

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