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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA004802-TA
JBrowseBomo_Chr25
chromosome_No.
Scaffold_id
Scaffold Length		chromo25
Bm_scaf46
3255295 bp
UniRef
UniRef50_Q8IJQ9 (33%/118)
Cluster: Putative uncharacterized protein; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein - Plasmodium falciparum (isolate 3D7)
Ontology
GO:0000027 P ribosomal large subunit assembly
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0005634 C nucleus
Orthologue
Sequence
(Amino Acid)
MDERYNGSPKEASTNAVWTRRDVWSNFNHNKNKERGLKQQNADSGKNQAKYETEREAINV
IATAEAKLDEDDQLRKNVWSDVDDELYIANLIKHRTTDVKRNKRGVSGSDISEQVVNSVS
LDNSAMWELEPTDLTECDCLGPPPEFLLPPPPRPPFLQSEYYCGDDPIPDLETCDTEPSQ
SRTSQTNESFISHNSKLEFVSCIVTIGNAYANV
(213 a.a.)
Sequence
(Nucleotide)
ATGGACGAGAGATACAACGGGAGTCCAAAGGAAGCGTCGACGAACGCTGTTTGGACACGA
CGCGATGTTTGGTCCAACTTTAATCACAATAAAAACAAAGAAAGAGGTTTAAAACAACAA
AATGCTGATAGCGGAAAAAATCAAGCAAAATATGAGACAGAACGAGAAGCTATCAATGTT
ATAGCGACTGCTGAAGCTAAGCTAGACGAAGATGACCAACTCAGGAAGAACGTGTGGAGT
GACGTCGATGACGAACTATACATAGCGAATTTGATAAAACACAGAACCACAGATGTTAAG
CGTAATAAACGTGGTGTAAGTGGTAGTGATATCAGTGAGCAGGTTGTGAATAGTGTTAGT
TTAGATAATAGCGCGATGTGGGAATTGGAACCCACCGATCTGACGGAGTGCGACTGTTTG
GGACCACCTCCAGAGTTTCTCCTGCCTCCGCCGCCGAGACCGCCGTTCCTTCAGTCAGAA
TATTACTGCGGCGACGATCCTATACCTGACCTAGAAACTTGCGATACGGAACCAAGCCAA
AGTCGAACAAGTCAAACAAACGAAAGTTTCATATCACACAATTCCAAGCTAGAATTCGTT
TCCTGCATTGTGACTATTGGGAACGCATATGCCAATGTCTGA
(642 bp)

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