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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA004284-TA
JBrowseBomo_Chr20
chromosome_No.
Scaffold_id
Scaffold Length		chromo20
Bm_scaf79
1594848 bp
UniRef
UniRef50_UPI0000DB6C23 (38%/131)
Cluster: PREDICTED: similar to DNA-directed RNA polymerase II largest subunit; n=1; Apis mellifera|Rep: PREDICTED: similar to DNA-directed RNA polymerase II largest subunit - Apis mellifera
Ontology
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
Orthologue
Sequence
(Amino Acid)
MILDDSEDQDSADSSSQQAEGPKVASNVAELLKRLQSTGALIKKPKQEHRCHTCEEDFSD
WDELEKHLIQHVSLPSVVIDKLPSDDEYSPPSGDENWSDEEEEPPAPFKATPQKLPSNIS
QILKNTGIIIKKTDTNTSSHSALNKLSGLGFTIKKNSTPIKQEPGSNVAPKSDDLQKINN
RGQIKLKLKFGNNGDSVRVVNGLKDFKTSDDEDEGSANEDSRGDNDEGQEGKPGEQEGSA
AENDSGDEQPDNAKGQDSDDSDGLVEKAIAKAKISTALKRLQQNATAKAETVPAAPIKTV
PMQIKPSGRPVIKQTPKRGDNLPMLAKIAPQQSIETSAPVTVASVRTPTPEKRPSQEQTM
ENVKVKQEVESGDHQPQPSLPLFSGQIKTERSVTPSLDRNNCSTPLIAIVKDDPDGSSNQ
PSQPIFSDSKTAPTSATVPLLPVTKIEDTGPTIIEINGDSNDEDDDCCVVSTTPAPDIKP
IVPKIENAPLVSCPSISQSFQSSQPSYNNSGHLSPRITTAPSLEKQHNFNWNAPDSKPHL
NSMNILDNTADEIFQSLIANSAKKENLSLSEASEYVSLDTLGPQHTCDVCNTRFTDISLL
DNHKRLTGHTRSLITPSSSTLMPYAQNSNILSSLLPVKHLADQVGKLSSIGGSGPGFTHQ
QNVMINIQAYPGGNGVMGQAPPLYNYSSGQTMGSPFSQTSSNMYSAPGPQQMPGQYPGQN
TYMGQQGYGQFPTSMPNSTYPGTKTENSYSAASSQYSTASPLQSMQQAVYGQSSGLMNTQ
GQMGPPGSIPYIPSSSPSGSMKPPQNTAIKIQNVQTFPANQMMGMSGQAGSTEMPPPQQP
QHQMQQQQQPTPGHAINQMPPPGQIRMAPGAQLVNMRPRMPTVRGQRPSIRPGIQVHGQV
RGVKPGTRMPLKRPGNMGPAPTMKKRPNMLLPDKHDNEDCQVMAMQKQREGLPMIHSVQG
AKDKIGSQISITKKTVNKEANAMANVLASRGISIKQKQKSRSPTPERPIPHIPNLGAGVS
IKHTSKTSSFSIPEAKVGGGMLSCKICKKMFMNHNSLAVHMTNAHPQCKLPIFKCDECPS
SYPKLLQLQHHKRVFHNVTGPNREVGIPVVDLSQEDNLKRLGNLGIYSFIPLANREQDNG
CFGIPVVSVHNMQNGLTSSLQALGADGLLSLGPLKPLPNA
(1180 a.a.)
Sequence
(Nucleotide)
ATGATCTTGGATGATAGTGAAGATCAAGATTCGGCCGATTCCAGTTCTCAACAGGCTGAA
GGTCCAAAGGTGGCCAGTAATGTCGCAGAGCTACTGAAAAGACTCCAGTCTACTGGTGCT
CTTATAAAGAAACCTAAACAAGAGCATAGGTGTCACACTTGCGAGGAAGATTTTTCCGAT
TGGGACGAGCTAGAGAAGCACCTAATCCAACACGTTTCCCTGCCGTCTGTCGTGATTGAC
AAGCTGCCTTCCGACGACGAGTATAGCCCGCCCTCTGGGGACGAAAACTGGTCCGATGAA
GAAGAGGAACCCCCAGCACCATTTAAAGCTACCCCTCAAAAGCTACCATCGAATATTTCT
CAAATACTCAAGAATACGGGTATTATTATCAAGAAAACTGACACAAATACTAGTTCACAT
TCAGCGTTGAACAAACTGAGTGGACTAGGTTTTACAATAAAGAAGAATAGCACGCCAATA
AAGCAAGAGCCCGGTTCCAATGTTGCCCCGAAGAGCGATGACCTGCAAAAAATTAACAAC
CGCGGTCAAATCAAACTAAAATTGAAATTTGGAAACAACGGTGATTCTGTTAGAGTCGTG
AACGGTTTAAAGGACTTCAAGACTTCAGATGACGAAGACGAGGGAAGTGCAAATGAAGAC
AGCAGAGGTGATAACGACGAAGGACAAGAAGGCAAGCCAGGTGAGCAGGAAGGCTCGGCC
GCGGAGAATGATTCCGGCGACGAACAACCCGACAACGCTAAGGGCCAAGACAGCGACGAT
TCGGATGGTCTAGTTGAAAAAGCAATTGCTAAGGCTAAGATTTCAACTGCGTTAAAAAGA
CTACAGCAGAACGCTACAGCAAAAGCTGAAACAGTACCGGCCGCCCCAATAAAAACAGTT
CCTATGCAAATAAAACCATCAGGTCGACCAGTAATAAAACAAACGCCTAAAAGAGGCGAT
AATCTACCGATGTTGGCTAAAATAGCCCCTCAACAATCAATAGAAACATCTGCACCGGTA
ACCGTGGCATCGGTTCGAACGCCCACTCCCGAGAAGCGTCCGTCACAAGAACAAACCATG
GAGAACGTGAAGGTGAAACAAGAGGTCGAAAGCGGCGACCATCAACCACAACCGAGTCTT
CCTTTATTCTCTGGTCAGATAAAGACAGAGAGAAGCGTCACTCCTTCTCTTGACAGGAAC
AATTGTTCCACACCATTAATAGCAATTGTCAAAGACGATCCCGACGGATCCTCAAACCAG
CCCTCTCAACCGATATTTTCGGACAGTAAAACAGCTCCCACAAGTGCGACGGTGCCACTA
CTTCCCGTCACGAAAATAGAAGACACTGGACCAACGATTATAGAGATCAATGGCGATTCT
AATGACGAGGACGACGATTGTTGTGTCGTTTCAACGACGCCGGCGCCCGATATTAAACCG
ATCGTACCTAAAATCGAAAACGCACCGCTCGTGTCCTGTCCCTCGATCTCGCAATCGTTT
CAAAGCTCTCAGCCCAGTTACAATAACTCTGGGCATTTATCGCCGAGAATAACAACGGCT
CCGTCTTTAGAGAAACAACACAATTTCAACTGGAACGCGCCGGATTCGAAACCGCACCTG
AACTCCATGAACATCTTGGATAATACGGCAGATGAAATATTTCAAAGCTTAATAGCTAAT
TCTGCGAAGAAGGAAAACCTCTCTTTGTCGGAGGCCAGTGAATACGTTTCGCTGGACACA
CTTGGACCCCAACACACTTGCGATGTCTGCAACACCAGGTTCACGGATATATCGCTGCTT
GACAACCACAAAAGATTGACAGGACACACGAGAAGCCTTATCACTCCCTCTTCGTCGACA
TTGATGCCGTATGCTCAAAATTCCAATATATTATCTAGTTTACTACCTGTGAAACATTTG
GCCGATCAAGTCGGAAAACTGTCAAGTATAGGAGGCAGCGGTCCCGGGTTCACGCATCAG
CAAAACGTTATGATTAATATACAAGCCTATCCTGGAGGAAATGGTGTAATGGGACAAGCG
CCTCCGCTATATAATTATTCAAGTGGACAAACTATGGGGTCGCCGTTTTCGCAGACTTCT
AGTAACATGTACAGCGCGCCCGGGCCGCAGCAGATGCCCGGCCAATACCCTGGTCAGAAC
ACTTACATGGGTCAGCAGGGCTACGGACAATTCCCCACTTCGATGCCGAATTCGACGTAT
CCGGGTACAAAGACAGAAAATTCATATTCTGCTGCATCTTCCCAATATTCTACGGCCTCG
CCACTTCAAAGCATGCAACAGGCTGTTTACGGTCAATCGTCTGGTTTAATGAATACACAA
GGTCAAATGGGTCCTCCAGGATCCATTCCATACATCCCGTCGTCAAGTCCGAGCGGTTCG
ATGAAACCGCCTCAAAATACCGCCATTAAGATACAAAATGTACAGACGTTCCCTGCTAAT
CAGATGATGGGTATGTCTGGTCAGGCAGGGTCAACAGAAATGCCACCGCCACAGCAACCG
CAGCATCAGATGCAACAGCAGCAGCAACCCACGCCCGGGCATGCGATAAACCAAATGCCA
CCGCCAGGTCAAATAAGGATGGCTCCGGGCGCCCAATTAGTAAATATGCGACCACGAATG
CCCACCGTTCGTGGTCAGAGACCTTCTATTCGACCAGGAATACAAGTTCACGGACAAGTA
CGAGGCGTAAAGCCTGGCACACGGATGCCGTTGAAAAGACCTGGAAACATGGGTCCCGCG
CCTACCATGAAAAAGCGGCCTAACATGCTACTACCTGACAAACATGACAATGAGGACTGC
CAAGTAATGGCGATGCAGAAACAGCGCGAAGGCCTACCCATGATCCACAGCGTACAGGGC
GCGAAAGATAAAATCGGCAGCCAAATTTCTATAACCAAGAAAACTGTGAACAAAGAGGCT
AATGCAATGGCGAACGTGCTGGCATCTCGCGGTATTAGCATAAAACAGAAACAGAAGAGT
AGATCGCCGACACCCGAGCGACCTATACCGCATATTCCGAACTTAGGGGCCGGGGTCAGC
ATCAAGCATACCTCTAAAACGAGCAGCTTTTCCATTCCCGAAGCGAAAGTCGGAGGCGGA
ATGCTCTCGTGTAAGATCTGCAAGAAAATGTTCATGAACCACAACTCTTTAGCGGTGCAC
ATGACGAACGCGCATCCCCAATGTAAATTGCCGATATTCAAGTGTGACGAGTGTCCGTCG
TCGTATCCAAAACTCTTGCAATTGCAGCATCACAAACGGGTGTTCCACAACGTGACAGGC
CCGAACCGGGAGGTCGGGATACCGGTCGTGGATCTGTCACAGGAGGACAATCTGAAGCGC
TTGGGCAACTTAGGGATATACAGTTTCATACCGTTAGCTAATAGGGAACAGGACAATGGT
TGTTTCGGTATACCTGTTGTGTCCGTGCACAATATGCAAAACGGTTTGACGAGTAGCCTT
CAGGCGTTAGGTGCGGATGGTCTTTTGAGTCTAGGCCCGCTGAAGCCGTTGCCCAACGCG
TAG
(3543 bp)

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