SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
NameBGIBMGA004258-TA
JBrowseBomo_Chr20
chromosome_No.
Scaffold_id
Scaffold Length
unknown
Bm_scaf176
171249 bp
UniRef
UniRef50_UPI0000E47E96 (46%/208)
Cluster: PREDICTED: similar to ENSANGP00000028549; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to ENSANGP00000028549 - Strongylocentrotus purpuratus
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0003964 F RNA-directed DNA polymerase activity
Orthologue
Sequence
(Amino Acid)
MADQTPIITGDSSVDQDASQSKPGKGAKNKKYEKFRTKKNQEFQAQLTATLLKRLHVRDP
TQVSTIRLRSSTAPAAIPISFRALPRIIRALWLRMTSIGTRPFGVLATEANYGIFLKITL
MLAEAKVAFAQMKCTAAPNINMEFAFLYTEMELRIMSSLAKLLPYPIAIYLEAIGNFSID
RQMVVPFLHPPVAADNAHVVAARAIDDLPNVDWEEVQIPVREGDAVIQQPGFRATPASVA
FWNNRIPTHQERTVFRQIIAAMDSKKGFNILSSIDHGEGSVVQAVRFPEQFDAEEAETLY
YTNVLVPTFEEQLAVLVTEFEKAMKAYEEVKSLINQQHQKLLARAGNQVTNEQSKTSDDE
PRPENISVEAESSSPRLQVKTTGTNSKIDDLLRCQYANFKAFLRPTSNIHVEAITEKWEF
KDALKTLQSRWIAIDSLHWEIETELCGDNETYSMMFDRYEKQFYNLKKAINTGMWSVTHR
DNTTPQLDTPEPEKKEMATTSTSMTHADIPMDVEQVDKLKERNKEIEKLLKIVDIIIRLT
EANENEQAYQILRPLNEKLAIKRFTEGLRNSRLSTILTARDYTELKDTQVGEQSTSSGSI
FTGQQRRVKGSKQVGKMTSAERGELVTVCACINAAGGHIPPYMIFPRKNWQNRFLNHAPP
SSDATTHPSGWMTGDSFIKFLKHFVRHVQPNADRKHLIIMDNHESHCSVDALNYAKDNGI
VLLTIPPHTSHKLQPLDRTVFGPLKTFYSQAASNFMLRHPGRTITIYDVSELLGEAFPRA
MVPTNIISGFRAAGIWPINPNIFTESEFMTRLVTDRPPPSQLEEPTQRSVIASDCPLPSP
LEEPVQSSSVSERASPSLLGGSVPMHFSPQDIMPYPKAGPRSQSSRERKRRRTRILTDTP
EKAAIEEQSNKKLAKIAEIEMKRKIKENRPTKKTVRQIFSLKKIDDDTSSDSDECPPLPS
SSGGEEELCSDGEGHRAFEPIRKEVGEFVVAIYNGSIAYVHIPKQKRRKFDKKAIKGRLI
GYDEDCYRIWITDGKHSTLVRSRDVIFDEKPLPICNSEIPKTEVETREYPITITPNTNLE
REVTIPEQTHVHERDTTTETISNEHDHVLEGEESDQVLYENHDHEDEMTVPEEFYDAEPP
PTDYNLRDRSLIRRPERLRDYVCITETFPNNFADAMKRDDREAWQRAMDSELKSFEDLNV
WTPCALPKGRKALPCKWFLRIKGNPDGTIDKYKARFVVKGYRQRKGVDYAPKISPVARLT
TVRALLSVSAHENLHLVQFDVCTAFLNGKLEEEIYVQSPEGCNLTEGTSTVFKLNRSLYG
LKQAPKSDDDDEGKRNEAKKRRYQGDDGQSDSDCRYKPFLKPGYRRSYPDNSLNDEFPVY
IEGISREDKIGKKNPLLLSKNFKSVKGIK
(1409 a.a.)
Sequence
(Nucleotide)
ATGGCAGATCAAACCCCCATAATTACCGGTGACTCAAGTGTCGATCAAGATGCATCGCAG
TCTAAGCCAGGAAAAGGAGCGAAGAACAAGAAGTATGAAAAGTTTCGTACCAAAAAGAAT
CAGGAGTTTCAAGCACAACTGACCGCTACTCTTCTAAAGCGCCTGCATGTTCGGGATCCC
ACGCAAGTTTCCACCATTCGATTGCGCTCAAGCACCGCGCCAGCCGCAATTCCAATTTCA
TTCAGAGCCCTACCTCGTATTATTCGAGCGTTATGGCTGAGGATGACCTCGATTGGAACG
CGACCTTTTGGCGTCTTAGCAACTGAGGCAAACTACGGGATTTTTCTTAAGATTACTCTT
ATGCTAGCCGAGGCAAAGGTTGCCTTTGCGCAGATGAAGTGTACCGCCGCCCCAAACATC
AACATGGAGTTCGCGTTTCTATACACTGAGATGGAGTTGAGGATTATGTCATCGTTGGCA
AAGCTTTTGCCCTATCCTATCGCCATATATCTCGAAGCAATTGGAAACTTCTCCATTGAT
AGACAGATGGTGGTCCCATTTCTACATCCGCCCGTGGCCGCGGACAACGCCCACGTTGTT
GCCGCTAGAGCAATCGATGATTTACCCAATGTTGATTGGGAGGAAGTCCAAATCCCTGTC
CGCGAAGGGGACGCTGTAATACAGCAGCCTGGCTTCAGGGCGACCCCCGCATCCGTCGCC
TTTTGGAACAATCGCATTCCAACCCATCAAGAGAGGACCGTTTTCAGGCAGATTATAGCT
GCTATGGATTCGAAGAAGGGCTTTAACATCTTGAGCTCCATCGATCATGGTGAAGGTTCA
GTCGTTCAAGCAGTTCGGTTCCCCGAACAGTTTGACGCCGAAGAGGCTGAAACGCTTTAC
TATACAAACGTCCTTGTACCGACATTTGAAGAGCAACTCGCGGTCCTCGTGACCGAGTTC
GAAAAAGCAATGAAGGCGTACGAAGAAGTGAAATCCCTAATCAACCAACAACATCAGAAG
TTGTTAGCTAGAGCAGGCAACCAGGTAACGAACGAACAATCAAAAACTTCCGATGATGAG
CCGAGACCCGAGAATATCAGCGTAGAAGCAGAATCTAGTAGTCCTAGACTGCAAGTGAAG
ACCACTGGTACAAATAGTAAAATAGACGATTTATTGAGGTGCCAATACGCGAATTTTAAG
GCGTTTTTGCGACCCACATCAAACATCCACGTGGAAGCTATTACGGAAAAATGGGAATTT
AAAGATGCATTAAAGACTTTGCAATCAAGATGGATAGCAATAGATTCTTTGCATTGGGAA
ATTGAGACCGAGTTGTGTGGAGATAATGAAACATACAGTATGATGTTTGACAGATATGAA
AAACAATTTTATAACTTAAAGAAAGCAATCAACACAGGTATGTGGTCTGTCACCCATAGA
GATAACACCACTCCTCAGCTTGACACTCCGGAACCAGAAAAGAAAGAAATGGCTACCACA
TCTACATCAATGACTCATGCTGACATTCCGATGGATGTGGAACAAGTAGATAAGTTAAAG
GAGAGGAATAAAGAAATTGAAAAATTACTGAAAATTGTTGATATAATAATAAGATTAACA
GAAGCCAATGAAAATGAACAAGCATATCAAATATTAAGACCATTAAATGAAAAATTAGCG
ATAAAACGCTTCACAGAGGGCCTGAGAAATAGTCGATTAAGCACAATTTTAACAGCTCGC
GACTATACAGAGTTAAAGGACACACAGGTAGGAGAACAGAGCACATCCTCTGGTTCTATA
TTTACAGGCCAACAGAGACGAGTTAAGGGTTCCAAACAAGTAGGAAAAATGACATCGGCC
GAACGAGGTGAGCTGGTTACCGTTTGTGCCTGTATCAACGCTGCCGGGGGCCACATCCCG
CCATACATGATATTCCCCCGAAAAAACTGGCAGAATAGGTTCCTCAATCATGCCCCTCCT
AGCAGCGATGCAACTACTCATCCTAGTGGATGGATGACGGGCGACAGTTTTATAAAATTC
CTCAAGCATTTTGTTCGTCATGTTCAACCCAACGCTGATAGGAAACACCTCATCATCATG
GACAATCACGAGAGTCATTGTTCTGTCGATGCCCTCAACTACGCAAAAGACAACGGAATC
GTTCTTCTCACAATTCCACCACACACATCCCACAAGCTGCAGCCATTAGACAGGACTGTT
TTTGGCCCCTTAAAAACCTTTTATTCTCAGGCAGCATCAAATTTTATGCTGAGACACCCC
GGGAGAACAATCACAATCTACGACGTTTCGGAACTGTTAGGGGAAGCTTTCCCAAGGGCT
ATGGTACCTACCAATATAATTAGTGGCTTCAGGGCGGCTGGAATATGGCCCATAAATCCC
AACATTTTCACGGAGAGTGAGTTCATGACCAGGTTAGTTACGGACCGCCCTCCCCCTTCT
CAACTTGAAGAACCAACACAGAGAAGTGTGATAGCGTCGGACTGCCCTCTCCCTTCTCCA
CTTGAGGAGCCCGTACAAAGCAGCAGTGTGAGTGAACGCGCTTCCCCATCCTTACTTGGA
GGATCAGTGCCGATGCACTTTTCACCACAGGACATCATGCCCTACCCCAAGGCAGGTCCA
CGCTCGCAGTCGTCGCGCGAGAGAAAGCGAAGACGTACTCGCATCCTAACCGATACTCCG
GAAAAAGCAGCCATCGAAGAACAATCAAATAAAAAGTTGGCGAAGATAGCGGAGATAGAA
ATGAAAAGGAAGATTAAAGAAAATAGGCCTACCAAGAAAACAGTGAGACAAATCTTTTCA
CTAAAAAAAATTGACGATGACACCTCATCTGATTCTGATGAATGTCCTCCACTTCCATCA
TCGTCAGGGGGGGAAGAAGAGTTATGCAGTGATGGCGAGGGTCATAGAGCTTTTGAGCCC
ATCAGAAAAGAAGTAGGGGAATTTGTAGTTGCAATTTACAATGGCTCAATCGCATACGTC
CATATTCCAAAGCAGAAGCGTAGAAAATTCGACAAAAAGGCGATAAAAGGTCGACTTATC
GGGTACGACGAAGATTGCTACCGTATCTGGATCACAGACGGAAAACACTCGACGCTCGTC
CGCTCTCGTGACGTAATCTTCGATGAGAAACCTCTTCCTATCTGTAATAGTGAAATTCCT
AAAACAGAAGTTGAGACAAGAGAATACCCGATTACCATAACGCCAAATACGAACTTAGAA
AGAGAAGTTACAATTCCAGAGCAAACACACGTTCACGAGAGAGATACAACTACCGAAACA
ATCTCCAACGAGCATGATCATGTTCTCGAGGGAGAAGAGTCGGATCAAGTCCTCTACGAA
AACCATGACCATGAAGACGAAATGACAGTTCCAGAAGAATTTTATGACGCTGAACCACCG
CCAACCGACTATAATCTTAGAGATCGCTCACTGATTCGACGTCCTGAGAGACTAAGAGAT
TACGTCTGTATCACTGAAACATTCCCAAATAATTTCGCAGACGCTATGAAAAGGGACGAT
CGCGAAGCATGGCAAAGAGCAATGGATAGCGAATTGAAATCCTTCGAAGACCTGAACGTT
TGGACGCCGTGTGCATTGCCAAAAGGACGAAAAGCACTTCCCTGCAAATGGTTTTTACGG
ATCAAAGGAAATCCAGATGGCACGATCGACAAATACAAAGCTCGATTTGTCGTAAAAGGG
TACAGACAAAGGAAAGGAGTAGACTATGCCCCGAAAATCAGTCCTGTGGCACGCCTGACT
ACTGTACGAGCACTACTCAGTGTTAGTGCGCATGAAAACTTACATCTGGTCCAATTCGAC
GTCTGCACAGCCTTTCTGAACGGAAAGCTCGAGGAAGAAATATACGTTCAATCGCCAGAA
GGGTGCAACCTCACGGAAGGAACGTCTACCGTTTTCAAGCTTAACCGTAGCCTGTACGGA
CTTAAACAAGCACCAAAAAGTGACGACGATGATGAGGGAAAAAGAAACGAGGCGAAAAAA
CGCAGATATCAAGGGGACGACGGACAATCAGATTCGGACTGCAGATATAAACCCTTTCTC
AAACCCGGGTACCGTCGTAGTTATCCTGATAACTCTCTTAACGACGAGTTTCCTGTCTAC
ATCGAAGGTATCAGCAGAGAAGATAAAATTGGTAAGAAAAACCCTTTGCTTTTATCAAAA
AATTTCAAGTCGGTGAAGGGCATCAAATAG
(4230 bp)

- SilkBase 1999-2023 -