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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA003672-TA
JBrowseBomo_Chr5
chromosome_No.
Scaffold_id
Scaffold Length		chromo5
Bm_scaf9
8107424 bp
UniRef
UniRef50_A1Z8F4 (44%/451)
Cluster: CG7734-PD, isoform D; n=8; Fungi/Metazoa group|Rep: CG7734-PD, isoform D - Drosophila melanogaster (Fruit fly)
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001745 P compound eye morphogenesis
GO:0003676 F nucleic acid binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003702 F obsolete RNA polymerase II transcription factor activity
Orthologue
Sequence
(Amino Acid)
MPLNQEKRSNITVSNNNDHNYLHKKFKKMASTIPVLPSNQSRGQEIRQKEINVIQNASNA
PITNGSISAAHPEIEKIKEKQHRQHVDAGENNVQINYNDENSKLDNVNTVQLSGQTSLTD
EFLNKTENLENDFIRDAYNGTVGGRYICPYCKLSCAKPSVLQKHIRAHTNERPYPCIPCG
FAFKTKSNLYKHCRSRMHALRLQGTDIPMTLNDDEMSGGSESDTPTSISEAGSDVSNCRI
ETLDYKPEPERLTDITQLRYTNTSPSETSKSKTIYKPKFRAGVAFYRESDEKEKLKKSIS
PNADFLNEHISKIISDNEAIIDVIETPLQKKYGKIKQIAESKQLMNDINEIKSDSSPLNL
TKNNNETEVSFRKRSHSESFSQGHFQKHPLNPEGSIIKDLLLKTKMDGMVPITGELLEGP
LFLCPVCQIMYRSADNLEIHRLYYCKGNVNSNVVSDSKDLKVIRTDNIFVRSNSVNVRLP
ESSSSAIQKSGINSKSAPARLKPENLVITKAECNDVVAPLPSPGPLLGNTRLVDSRIPSE
FARKNDVIKSKPIASPKRKIDSHSDAYSPRLVENVSPRSTDLYSHPKLRCVETNSNNLRS
IEEISPNLRINSTSLQMFGGEVKIVDHSGSTTTLRIEPNKNQLSPIMIQTNLSPSKLISD
IEASSVVVRSGLHSGGTIVHNPPTPKENLSTPQPQTPRMTISTTGVPNSNLPNIHDITHF
QFPPLSAITAFNPLTLPPLSPSASVSPNGATKIMHGGKLIPHVPGIPGPNTPSRFIGNTN
TVPKNLGNNDKTISIHDDKHSNLGAIHPIKSPHVMAKYDTQQLRNTRSPNLRIPHMETEK
HVQTHEHSEVHYISSIPIINVNNAEDTKIYSSNTIKQLHRQDVGLKRNAEGVLRTPVLKE
NVNFPNNKNKNKAPGLLIKTLDIKNEKEIRNFNFENLITKTEIFNNQVPTSCDIQKNNTQ
VTTSCATPQNERSEPLYFQKNIMVKSANGERKPKFLRPSTLPLKPGTFTPKRHHGITPNA
NTMPLVSPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMY
SNWQLLSELTPDPLGLSASSAMSLYDSRHRPQNMSVAVIKHDLILTHSSQWNTFIKEKKQ
VLQSLDVKKIEENKSQIMSESENLMTPKKELTGGFESNEEYTYVRGRGRGRYVCSECGIR
CKKPSMLKKHIRTHTDVRPYTCVHCAFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGDC
DTNEMAQCSGETDDDTDSDGDEGNEGETESSDTEAYKSRLPEHEAAHCLLSLGGNRPSTS
ATPGLLTSARPTTYPYAPVGLECIEIYTEQVRDSSVDVRVDAENEPIDLSKNDVKTPNIP
EIPTARESSVLASLASNTAKLPQAPNQWTNGEPLLHTYLTERALLDTKISKVKLRVA
(1437 a.a.)
Sequence
(Nucleotide)
ATGCCGCTCAATCAAGAAAAACGTTCGAACATAACTGTTTCTAATAACAATGACCACAAC
TACCTTCACAAGAAATTTAAAAAAATGGCATCTACTATACCCGTTCTACCATCAAATCAG
TCAAGAGGTCAGGAAATTAGACAAAAAGAAATAAACGTGATACAGAATGCATCTAATGCT
CCGATAACAAATGGAAGCATTTCTGCAGCACATCCTGAAATTGAAAAAATTAAAGAAAAA
CAACACAGGCAGCACGTAGATGCGGGTGAAAATAATGTACAAATTAATTATAATGATGAA
AATAGTAAGTTAGATAATGTAAATACTGTTCAACTATCTGGTCAAACCAGTTTGACAGAT
GAATTTTTAAACAAGACTGAGAACCTTGAAAATGATTTTATCAGGGATGCCTATAATGGC
ACAGTAGGCGGGCGATATATATGCCCATATTGTAAATTATCTTGTGCCAAGCCTTCAGTT
CTTCAAAAACATATCAGAGCACATACTAACGAGAGACCCTATCCATGTATACCTTGTGGA
TTTGCCTTTAAGACAAAATCAAATTTATACAAACATTGCCGATCACGTATGCATGCGTTA
AGGTTACAAGGAACAGATATACCTATGACTCTAAATGACGACGAAATGTCAGGGGGGTCC
GAGAGTGACACTCCTACCTCTATCTCTGAAGCAGGGTCAGACGTTTCGAATTGTCGAATA
GAAACGTTGGACTATAAGCCTGAACCCGAACGGCTTACGGATATAACACAACTCCGCTAC
ACAAATACATCTCCAAGTGAGACCAGTAAATCGAAGACAATTTATAAACCTAAATTTAGA
GCTGGAGTTGCGTTTTACCGTGAAAGCGATGAGAAAGAAAAATTAAAGAAATCAATATCA
CCAAATGCAGATTTTCTCAACGAACATATCTCTAAAATTATATCAGACAACGAAGCTATA
ATTGATGTTATAGAAACACCATTACAAAAAAAATATGGTAAAATCAAACAAATAGCAGAA
AGTAAACAACTTATGAATGACATTAACGAAATAAAGTCGGATTCGTCTCCCTTGAATCTG
ACAAAAAACAATAATGAAACAGAAGTTTCGTTCAGGAAAAGATCCCATTCTGAAAGTTTT
TCACAGGGTCATTTTCAAAAACACCCTTTGAATCCTGAGGGATCTATAATAAAAGATCTC
CTCTTAAAAACGAAAATGGACGGAATGGTGCCAATTACTGGAGAACTGCTCGAAGGTCCC
CTATTTCTTTGCCCTGTTTGTCAAATAATGTACAGAAGTGCAGATAATTTAGAAATTCAT
AGGCTGTATTATTGTAAAGGTAACGTTAACAGTAATGTAGTCAGTGACAGTAAAGATCTA
AAAGTTATAAGAACTGACAATATTTTTGTAAGAAGTAATTCTGTTAATGTGCGATTACCT
GAAAGTAGTTCAAGTGCTATTCAAAAATCAGGCATAAATTCAAAATCAGCACCAGCTCGA
TTAAAACCAGAGAACCTCGTTATCACGAAGGCAGAATGCAATGATGTGGTAGCTCCTTTG
CCATCACCAGGTCCTTTACTCGGCAACACCCGACTTGTGGACTCAAGAATACCATCTGAA
TTTGCTAGAAAAAACGACGTTATAAAATCAAAACCTATAGCAAGTCCAAAAAGGAAAATT
GATAGTCATTCTGATGCATACAGTCCAAGATTAGTAGAAAACGTATCACCAAGATCTACT
GACTTGTATTCTCACCCAAAATTGAGATGCGTAGAAACAAATTCGAATAATTTACGTTCG
ATCGAAGAAATTTCACCTAATTTAAGAATTAATTCAACATCCCTTCAAATGTTTGGTGGT
GAAGTGAAGATAGTAGACCATTCTGGGAGCACTACAACATTGCGTATTGAACCAAATAAA
AACCAATTGTCACCTATAATGATTCAGACAAACTTGTCGCCATCGAAGCTTATTAGTGAC
ATTGAAGCAAGTAGTGTTGTAGTTAGATCTGGTTTGCATTCAGGCGGGACAATCGTTCAT
AATCCTCCAACACCGAAGGAAAACTTGAGTACTCCACAGCCACAGACGCCTAGAATGACA
ATATCAACGACTGGTGTTCCAAATTCAAACTTGCCGAATATTCATGATATAACTCATTTT
CAATTTCCGCCACTCAGTGCAATTACGGCTTTTAATCCGTTAACACTGCCTCCATTGAGT
CCTTCAGCATCTGTATCACCCAACGGAGCTACGAAAATTATGCATGGAGGGAAATTGATC
CCACACGTTCCAGGTATACCAGGACCAAATACTCCAAGTAGGTTTATAGGAAATACAAAT
ACAGTTCCAAAAAATCTAGGGAATAACGATAAAACAATTTCTATACATGATGATAAACAC
TCAAACTTAGGAGCCATACACCCTATAAAAAGTCCTCACGTAATGGCGAAGTATGATACT
CAGCAATTGCGCAATACACGAAGTCCTAATTTGAGGATACCTCACATGGAAACCGAAAAA
CATGTTCAGACACATGAACATAGTGAAGTACATTATATTTCTTCCATTCCTATTATCAAT
GTAAATAATGCTGAAGACACAAAAATATACTCCTCCAACACCATAAAACAACTCCATAGA
CAAGATGTCGGGCTGAAAAGAAACGCTGAGGGAGTTTTAAGGACACCTGTCTTGAAAGAA
AACGTTAACTTCCCAAACAATAAAAATAAAAATAAAGCACCTGGATTGTTGATCAAAACA
TTAGATATTAAAAATGAAAAAGAAATACGTAATTTTAATTTTGAGAATTTGATAACGAAA
ACTGAAATTTTCAATAACCAAGTTCCAACTTCATGCGATATTCAGAAGAATAACACACAA
GTTACAACATCGTGTGCAACTCCGCAAAATGAAAGGTCGGAGCCTTTATATTTTCAAAAG
AACATAATGGTAAAGTCTGCTAACGGTGAAAGAAAACCAAAATTTTTGAGGCCGTCTACG
TTGCCTTTAAAGCCTGGGACGTTTACACCAAAAAGACATCACGGTATTACACCAAATGCA
AATACTATGCCCTTGGTATCACCCGAAACTCCCAGACCAGCCAAGGCCTATGGGCAGTTG
TACCTTAACGGAAATGCGTATACGTACTTGGGCCTGAAATGTTCAACTAAGGTTTTTTAT
TGCACCATCAACAGACCTCAACCAACTTACGTTCCAAATCAACATTTTCTTTCCATGTAC
AGTAATTGGCAGTTATTATCAGAATTGACACCAGATCCATTAGGGTTGTCGGCGTCTTCA
GCTATGTCTTTATACGATTCTCGACATCGACCACAAAATATGTCAGTAGCAGTAATTAAG
CACGATCTTATTTTAACACACTCATCACAATGGAATACATTTATAAAAGAAAAGAAACAG
GTGCTCCAGTCACTAGATGTAAAAAAGATAGAGGAAAATAAGTCTCAAATTATGTCAGAG
TCTGAAAACTTGATGACTCCCAAAAAAGAGTTGACTGGTGGCTTTGAAAGTAATGAAGAG
TACACATATGTTCGGGGGCGTGGGAGAGGACGTTACGTCTGCTCCGAATGCGGTATTAGA
TGCAAGAAACCATCCATGTTAAAGAAGCATATTCGCACTCACACCGACGTGAGGCCTTAC
ACATGCGTGCATTGCGCTTTCAGCTTTAAAACTAAGGGTAATTTAACTAAACATATGAAA
AGCAAAGCTCATTACAAAAAGTGTTGTGAGTTGGGTATAAATCCAAATGAAGGTGATTGT
GACACTAATGAAATGGCCCAATGCTCTGGTGAAACAGATGACGACACTGATTCAGATGGA
GATGAAGGAAATGAGGGTGAAACTGAATCCAGTGATACGGAAGCATATAAATCTCGTTTA
CCGGAACATGAAGCTGCACATTGCTTGTTGTCTTTAGGTGGTAACAGACCTTCTACGTCA
GCTACTCCAGGTTTATTAACAAGTGCTAGACCAACAACGTATCCTTACGCACCCGTGGGA
TTGGAATGTATCGAAATATACACAGAACAGGTTAGGGATTCATCTGTTGATGTGAGAGTT
GATGCAGAAAATGAACCTATTGATCTCAGTAAAAATGATGTGAAAACACCTAACATTCCT
GAAATTCCAACTGCAAGAGAATCAAGTGTTTTAGCTTCTTTGGCTTCAAATACCGCTAAG
CTCCCTCAAGCTCCGAATCAATGGACAAATGGGGAACCTTTGCTACACACATATTTGACC
GAAAGAGCTTTATTAGATACAAAAATAAGCAAAGTCAAGTTACGAGTTGCCTAA
(4314 bp)

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