SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA003618-TA
JBrowseBomo_Chr5
chromosome_No.
Scaffold_id
Scaffold Length		chromo5
Bm_scaf9
8107424 bp
UniRef
UniRef50_Q28811 (60%/463)
Cluster: Deoxyribodipyrimidine photo-lyase; n=26; root|Rep: Deoxyribodipyrimidine photo-lyase - Potorous tridactylus (Potoroo)
Ontology
GO:0003677 F DNA binding
GO:0003904 F deoxyribodipyrimidine photo-lyase activity
GO:0003913 F DNA photolyase activity
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
Orthologue
Sequence
(Amino Acid)
MASASKKRKTSIPMALGKSNESTSTIEEFLKKLQKKREETAESILNFDFNKKRIRIISQE
QIIPDDCDGVVYWMSRDSRVQDNWAFLFAQKLALKNEVPLHVCFCLISKYLDASLRQFHF
LVKGLEKVAAECKKLNIQFHLLEGSGAEVLPQWVVDHNIGAVVCDFNPLRVPMGWLDGVK
GKLRKDVPLIQVDTHNVVPCWVASDKQEYSARTIRNKINSKLDEFLTEFPPVIKHPYSSK
FEAEPIDWHEAIETREADKSVGPVDWAKPGYDEAVKMMKSFLDKRLNIYASKRNDPTQDA
LSNLSPWFHFGQISVQRVALCVQEYKSKFTESVNAFLEEAIVRRELADNFCFYCEHYDSV
KGASAWAQKTLDDHRKDKRTHIYTLEKLSKGETHDDLWNSAQLQLVKEGKMHGFLRMYWC
KKILEWTPTPEDALKYGIYLNDHYSIDGRDPSGFVGCMWSICGIHDQGWAERAVFGKIRY
MNYDGCKRKFDIKAFIARYGGKVHKYVPKK
(510 a.a.)
Sequence
(Nucleotide)
ATGGCATCGGCTTCAAAGAAACGCAAAACTTCCATTCCTATGGCATTAGGTAAAAGCAAT
GAAAGTACAAGCACCATTGAAGAGTTTCTGAAAAAACTACAAAAAAAGCGCGAAGAAACG
GCTGAGTCTATTTTGAACTTTGATTTCAACAAAAAACGCATTCGAATAATATCTCAAGAA
CAAATTATACCTGACGATTGCGATGGTGTTGTATACTGGATGTCTAGAGACAGCCGTGTT
CAGGATAATTGGGCTTTCCTTTTTGCACAAAAACTGGCCTTGAAAAACGAAGTACCGCTT
CATGTATGTTTTTGTTTAATTTCGAAGTATCTGGATGCGTCCTTGCGACAATTTCATTTC
CTTGTAAAAGGACTAGAAAAAGTAGCTGCAGAGTGTAAGAAACTAAACATACAATTCCAT
TTATTAGAAGGTAGTGGTGCGGAAGTGTTACCTCAATGGGTAGTAGATCATAATATTGGT
GCGGTTGTGTGTGATTTCAATCCACTTAGGGTCCCTATGGGCTGGTTGGATGGAGTAAAG
GGAAAACTTAGGAAAGATGTGCCTTTAATTCAGGTAGACACTCACAATGTAGTTCCATGT
TGGGTGGCATCAGACAAACAGGAGTATTCTGCAAGGACAATCAGGAATAAAATTAATTCA
AAACTTGATGAGTTTCTCACAGAATTCCCCCCAGTTATAAAACATCCATATTCCAGCAAA
TTTGAAGCAGAGCCCATTGACTGGCATGAAGCCATTGAGACGAGAGAAGCAGATAAATCA
GTTGGTCCTGTTGATTGGGCTAAGCCTGGTTATGATGAAGCTGTGAAAATGATGAAAAGT
TTTCTTGACAAGAGATTAAACATATATGCCAGTAAAAGGAATGACCCAACTCAGGATGCC
CTGAGCAATCTCTCACCTTGGTTCCACTTTGGTCAAATATCAGTACAAAGGGTAGCCCTA
TGTGTACAAGAATACAAATCGAAATTTACTGAAAGTGTGAATGCATTTCTAGAAGAAGCT
ATAGTAAGGCGAGAACTAGCTGACAACTTTTGTTTCTATTGTGAACATTACGACAGTGTA
AAGGGTGCTAGTGCGTGGGCCCAAAAAACTTTGGATGATCACAGAAAAGACAAGAGAACT
CACATTTATACTCTAGAAAAACTTTCTAAAGGTGAAACTCATGATGACTTGTGGAATTCG
GCTCAGCTACAACTTGTTAAAGAGGGCAAAATGCATGGCTTTTTAAGAATGTATTGGTGT
AAGAAAATATTGGAATGGACTCCTACTCCGGAGGATGCTCTTAAATATGGAATATATTTG
AACGACCACTATAGTATCGATGGGAGAGATCCAAGTGGATTTGTAGGCTGCATGTGGTCG
ATATGCGGCATCCACGACCAAGGCTGGGCAGAGCGCGCCGTCTTCGGTAAAATTAGATAC
ATGAATTACGACGGGTGTAAGCGTAAGTTCGACATCAAAGCCTTCATTGCCAGGTACGGA
GGGAAGGTACACAAATATGTACCTAAAAAGTAG
(1533 bp)

- SilkBase 1999-2023 -