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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA003488-TA
JBrowseBomo_Chr5
chromosome_No.
Scaffold_id
Scaffold Length		chromo5
Bm_scaf9
8107424 bp
UniRef
UniRef50_Q9NB04 (51%/433)
Cluster: Patj homolog; n=4; Diptera|Rep: Patj homolog - Drosophila melanogaster (Fruit fly)
Ontology
GO:0001736 P establishment of planar polarity
GO:0002009 P morphogenesis of an epithelium
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
Orthologue
Sequence
(Amino Acid)
MHLGVNVSNALQQLESVKAAVDQSNDPKLKAATSDDLNMLISLLESPILRSITTLHDSVG
MLATQVAHHPSILPGDFDITPAGDLALQTRNLYGNQEGEEEQRVPQVSPPHSMEFGSDNE
HILGLDSGSVDSNMSPKQSRGLLDLSRNDDSLASTNHNVVAGDWAQVEIINLVNDGTGLG
FGIIGARTSGVIVKTILAGGVADRDGRLKSGDHILQIGDVSLMEMGSEQVAGVLRASGSR
VRLVVARAVDPAALHASPAPVVPARLLSDPESLDRYLMEAGFEQVFHTQPVPVSSTSTRF
VFDNPITPPPDSDAESPEVDRFTVQLKKDENGLGITIAGYVCEKEELSGIFVKSVTPGSA
AALSGMVRVNDRIVAVDGVSLAGKSNQRAVDALKQSRNVVTLELERYLRGPKYEQLQQAI
AAGEAAAPPPPPNPFLHMHRPDAPSPEIEIQLSNLQITDNGTDDAVPLTRSSPPATALRP
APAFEMPRTPEQKEAIRRKWQAILGEDVEIVVGVVVRGGGGLGISLEGTVDVEGGREVRP
HHYVRSVLPEGPVGRAAVHRPGDELLEVNGHRLLGMNHLEVVSILKELSSEVCMVCARPR
PAPPLDLAPPATTLVKVKFVL
(621 a.a.)
Sequence
(Nucleotide)
ATGCATTTGGGCGTGAACGTCTCAAATGCATTACAGCAATTGGAAAGTGTGAAAGCTGCT
GTGGACCAGAGCAATGATCCCAAGCTTAAAGCTGCAACCAGTGATGATTTGAACATGCTA
ATAAGTTTATTAGAGAGTCCCATATTACGAAGTATTACTACACTTCATGACTCTGTGGGC
ATGCTTGCAACTCAGGTTGCACATCACCCATCAATTTTACCTGGAGATTTTGATATTACT
CCTGCTGGTGACTTGGCATTACAAACAAGAAATTTGTATGGAAATCAAGAGGGTGAAGAG
GAGCAAAGGGTGCCACAGGTCTCACCTCCACATAGTATGGAGTTTGGATCTGATAATGAA
CATATTCTTGGACTTGATAGTGGCTCTGTTGACTCTAACATGTCTCCTAAACAAAGTCGT
GGCTTATTAGATTTGTCTCGTAATGATGATTCTTTAGCATCTACCAATCACAACGTAGTA
GCAGGGGACTGGGCACAAGTTGAAATTATAAATCTTGTAAATGATGGAACTGGCCTTGGA
TTTGGTATTATAGGTGCTAGAACAAGTGGTGTCATTGTAAAGACGATACTAGCAGGTGGT
GTAGCTGATCGCGATGGCCGACTAAAATCTGGAGATCACATTCTACAGATTGGAGATGTA
AGCCTTATGGAGATGGGTTCCGAGCAAGTAGCTGGTGTGCTACGTGCGTCCGGTAGTCGT
GTGAGGCTCGTCGTGGCGCGAGCAGTGGATCCGGCGGCCTTGCATGCGTCACCCGCTCCC
GTCGTGCCTGCCAGGCTTTTGTCAGACCCCGAATCGCTGGATCGCTATCTCATGGAAGCT
GGTTTTGAGCAAGTGTTCCATACGCAGCCTGTGCCTGTCAGCTCCACTTCGACGAGATTT
GTATTTGACAATCCCATAACACCCCCTCCAGATTCAGATGCTGAATCACCAGAAGTTGAT
AGATTCACAGTTCAACTGAAGAAAGACGAGAACGGCTTAGGGATTACTATTGCAGGTTAT
GTTTGCGAAAAGGAGGAGCTGTCAGGTATATTTGTGAAGTCGGTGACTCCGGGGAGCGCT
GCAGCGTTGAGCGGAATGGTGAGGGTCAATGACCGCATCGTTGCCGTCGATGGCGTCTCC
CTCGCAGGGAAATCCAACCAGCGCGCTGTGGACGCCCTGAAACAGAGTCGCAACGTTGTC
ACGCTAGAACTAGAAAGATACCTGCGTGGTCCGAAATATGAGCAACTGCAGCAAGCGATA
GCGGCGGGCGAGGCGGCCGCCCCCCCTCCCCCGCCCAACCCGTTCCTGCACATGCACCGT
CCCGACGCACCTTCTCCTGAAATAGAAATACAGCTCTCCAACCTCCAAATAACGGATAAC
GGCACAGATGACGCTGTGCCTCTAACTCGCAGCAGTCCTCCGGCGACTGCACTGCGTCCG
GCACCAGCGTTCGAGATGCCACGGACTCCTGAACAAAAAGAAGCGATAAGAAGGAAATGG
CAGGCTATATTAGGCGAGGACGTGGAGATAGTGGTGGGCGTGGTGGTGCGCGGTGGGGGT
GGTCTGGGCATTTCGCTAGAAGGCACCGTGGACGTGGAGGGGGGGCGCGAGGTGAGGCCG
CATCACTACGTGCGCTCCGTGCTGCCCGAGGGGCCCGTGGGCCGCGCCGCCGTGCATCGC
CCCGGCGACGAGCTGCTCGAAGTGAACGGTCATCGGCTCCTGGGCATGAACCACTTAGAA
GTGGTGTCAATTCTGAAGGAATTATCGAGTGAAGTCTGCATGGTGTGTGCGAGACCTCGA
CCTGCGCCCCCTCTCGACCTAGCGCCGCCTGCCACAACATTAGTGAAGGTTAAATTTGTT
TTATAA
(1866 bp)

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