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Last updated: 2022/11/18
NameBGIBMGA003484-TA
JBrowseBomo_Chr5
chromosome_No.
Scaffold_id
Scaffold Length
chromo5
Bm_scaf9
8107424 bp
UniRef
UniRef50_P24928 (72%/1561)
Cluster: DNA-directed RNA polymerase II subunit RPB1; n=473; cellular organisms|Rep: DNA-directed RNA polymerase II subunit RPB1 - Homo sapiens (Human)
Ontology
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
Orthologue
Sequence
(Amino Acid)
MATANDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGIRFPETMEGGRPKLGGLMDPRQGV
IDRSSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKLLVSPTNP
KIKEVIMKSKGQPRKRLTYVYDLCKGKNICEGGEDMDIGKEGEEGKRGSGHGGCGHYQPS
IRRQGLELTAEWKHANEDTQEKKIFVSAERVWEILKHITDEDSFILGMDPNFARPDWMIV
TVLPVPPLCVRPAVVMFGSAKNQDDLTHKLADIIKANNDLEKNEQSGAAAHVLAENIRML
QFHVATFVDNDMPGMPKAMQKSGKPLKALKARLKGKEGRIRGNLMGKRVDFSARTVITPD
PNLRIDQVGVPRSIAQNMTFPELVTPFNLDRMQELVRRGNAQYPGAKYIVRENGERIDLR
FHPKSSDLHLLYGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTK
RDVFLTKEQVMNLLMFLPTWDGKIPQPCILKPQPLWTGKQIFTLIIPGPVNMIRTHSTHP
DEEDDGPYKWISPGDTKVVVEHGELLMGILCKKSLGASAGSLLHICMLELGHETAGRFYG
NIQTVINNWLLLEGHSIAIGDTIADPQTYQEIQRAIVKAKDDVIEVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVAGSKGSNINISQVIACVGQ
QNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDT
AVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLAGETVEFQNLPTVK
LSNKAFEKKFKFDSSNERYLKRIFSEDIVRELTESGSVIADLESEWEQLSKDRETLRQIF
PTGESKVVLPCNFKRMIWNAQKTFHINKRIPTDLSPIKVIKGVSDLLKKCVLVAGDDRLS
KQANENATLLFQCLVRSTLCTKFVSEEHRLSSVAFEWLIGEIEARFQQAQVNPGEMVGAL
AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAARD
AEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPAKISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKCIEANMLSDMTLQGIE
AIAKVYMHLPQTEAKKRITITEQGEFKAIAEWLLETDGTSLMKVLSERDVDPIRTFSNDI
CEIFQVLGIEAVRKSVEKEMNAVLQFYGLYVNYRHLALLCDVMTAKGYLMAITRHGINRQ
DTGALMRCSFEETVDVLLDAASHAEVDPMRGVSENIIMGQLPRMGTGCFDLLLDGEKCKE
AMGGLGGAEVGMYFGVGTPSMSPLMTPWSTQNTPGYGSSVWSPCQVGSSMTPGGPSFSPS
NASDASGLSPAYSNAWSPQPGSPGSPGPPLSPYSSPAGASPSYSPSNPVYAPASPSITPT
SPHYSPASPSYSPTSPNYSPTSPIYSPTSPSYSPTSPGYSPTSPLYSPASPRYSPSSPNY
SPASPAYSTTSNFPTTSPNYSPSSPSYSPTSLSYSPTSPGYSTSPGYSPSSPRYSPNSPV
YSPTSSNYSPSSPNYTSGSVYSPTSPTYSPTSRSYSPSSPSYSQSSPNYSPSSPNXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXILHHLTIIHVHLPGIPQDHQNIPRHRLLLLLLLPII
LRALLRILPLVDHLPILQLHQHIHLLHPIMMMVTTELKMFFFTIMYYNFYYTSIIY
(1856 a.a.)
Sequence
(Nucleotide)
ATGGCGACGGCGAATGATTCTAAGGCGCCTTTGCGTCAAGTAAAAAGAGTACAGTTTGGA
ATACTATCCCCAGATGAAATTCGACGCATGTCAGTTACTGAGGGAGGGATTCGATTCCCG
GAGACCATGGAAGGTGGAAGACCGAAGCTTGGCGGTCTTATGGATCCTCGACAAGGGGTA
ATTGACAGAAGCTCACGGTGTCAAACGTGTGCTGGGAATATGACAGAATGTCCAGGACAC
TTTGGGCACATTGATTTAGCTAAACCAGTTTTCCATATTGGTTTCATAACAAAAACAATA
AAAATACTCAGATGTGTATGCTTTTATTGTTCAAAGCTGCTTGTCAGCCCTACAAATCCA
AAGATAAAAGAAGTTATAATGAAATCCAAGGGCCAACCCCGCAAACGGTTGACCTATGTT
TATGATCTGTGCAAAGGAAAAAATATATGTGAAGGTGGTGAAGACATGGATATTGGGAAA
GAAGGTGAAGAAGGTAAAAGAGGATCTGGTCATGGTGGTTGTGGGCATTATCAACCCTCT
ATTAGACGACAAGGTCTAGAGCTCACAGCTGAGTGGAAACATGCTAATGAAGATACACAA
GAAAAGAAAATTTTTGTCTCTGCAGAAAGAGTATGGGAAATTTTGAAACATATAACAGAT
GAAGATTCATTTATTTTGGGTATGGATCCAAATTTTGCAAGACCAGATTGGATGATTGTG
ACGGTTTTGCCTGTCCCTCCATTGTGTGTTCGTCCAGCTGTTGTTATGTTTGGCTCTGCC
AAAAATCAAGATGACTTAACCCACAAGCTAGCTGATATAATAAAAGCTAACAATGACTTG
GAAAAAAATGAGCAGTCTGGAGCTGCTGCTCATGTCCTTGCAGAGAATATAAGAATGTTA
CAATTTCATGTTGCTACTTTTGTTGACAATGACATGCCTGGTATGCCAAAAGCTATGCAG
AAATCTGGGAAGCCCTTAAAGGCTCTCAAAGCCAGATTGAAAGGAAAAGAAGGAAGAATT
CGAGGAAATCTAATGGGGAAACGTGTTGACTTCTCAGCTAGGACAGTAATCACACCTGAT
CCAAATTTACGTATAGATCAAGTTGGGGTTCCCAGATCAATTGCTCAAAATATGACATTC
CCAGAGTTGGTGACTCCATTTAATCTTGATAGAATGCAAGAACTTGTCCGAAGAGGAAAT
GCACAATACCCTGGGGCAAAGTACATTGTAAGAGAAAACGGAGAAAGAATTGATTTAAGA
TTCCATCCTAAATCTTCAGATTTACATTTACTCTATGGTTACAAAGTAGAAAGACATCTA
AGAGATGATGACCTTGTTATATTTAATCGTCAACCAACTCTTCACAAAATGAGTATGATG
GGTCACAGAGTTAAGGTACTTCCTTGGTCAACGTTTCGTATGAATTTGAGTTGCACATCA
CCTTACAATGCTGATTTTGATGGAGATGAAATGAATTTGCATGTTCCTCAATCAATGGAA
ACAAGGGCTGAAGTTGAAAATATTCATATAACACCTAGACAAATTATAACTCCACAGGCT
AATAAACCTGTAATGGGTATTGTGCAGGACACATTGACTGCCGTTAGAAAAATGACTAAG
AGAGATGTTTTTTTAACAAAAGAACAAGTAATGAATCTTCTTATGTTTTTACCTACATGG
GATGGTAAAATTCCTCAACCTTGCATTTTGAAACCACAGCCTTTATGGACAGGTAAACAA
ATATTCACTTTAATAATACCTGGTCCTGTTAATATGATTCGAACTCACTCTACTCATCCT
GATGAAGAAGATGATGGTCCTTACAAGTGGATTTCTCCAGGAGATACCAAAGTTGTTGTA
GAACATGGAGAACTACTAATGGGTATTTTGTGTAAAAAGTCGCTTGGTGCATCTGCTGGC
TCTCTGTTGCATATTTGCATGTTGGAATTAGGCCATGAAACTGCTGGACGATTCTACGGT
AACATTCAGACTGTCATTAATAACTGGCTTCTGTTGGAAGGTCACTCAATTGCTATTGGT
GACACTATTGCTGATCCACAGACATATCAAGAAATTCAGCGTGCAATCGTAAAAGCTAAA
GATGACGTAATAGAAGTCATTCAGAAAGCCCACAATATGGAATTGGAACCCACACCTGGT
AATACACTAAGGCAGACCTTTGAAAATCAAGTGAACCGTATCCTCAATGATGCTCGTGAT
AAAACAGGTGGATCTGCTAAGAAATCATTAACAGAATACAATAATCTCAAAGCTATGGTA
GTTGCTGGCTCGAAAGGTTCAAACATTAATATTTCACAAGTCATTGCTTGTGTAGGCCAA
CAGAATGTTGAAGGAAAACGAATCCCATTTGGATTTAGAAAACGCACCTTACCCCACTTT
ATTAAAGATGATTATGGTCCTGAATCCAGAGGTTTTGTTGAAAACTCTTATCTAGCTGGT
CTGACTCCTTCAGAATTCTATTTTCACGCCATGGGTGGACGTGAAGGTTTAATTGATACT
GCTGTAAAAACTGCTGAAACTGGATACATTCAACGGCGTCTCATTAAAGCCATGGAGTCT
GTAATGGTCCACTATGATGGTACAGTTAGAAACTCTGTTGGACAACTTATTCAATTGAGG
TATGGTGAGGACGGTCTCGCAGGAGAGACAGTAGAATTCCAGAACCTGCCGACTGTTAAA
TTGTCAAATAAAGCATTTGAAAAGAAATTCAAATTTGACTCTTCCAATGAGAGATATCTG
AAGAGAATTTTCAGTGAAGACATAGTCAGAGAGCTAACAGAATCTGGAAGTGTCATAGCT
GACCTTGAAAGTGAGTGGGAACAACTTTCTAAAGACAGAGAAACATTACGTCAGATTTTC
CCAACGGGAGAATCTAAGGTTGTATTGCCATGTAATTTCAAGAGAATGATTTGGAATGCT
CAGAAAACATTCCACATAAACAAGAGAATACCAACAGACTTAAGCCCTATCAAAGTTATA
AAAGGTGTATCAGACCTTCTAAAGAAGTGTGTCCTTGTAGCTGGTGATGATCGTTTGTCT
AAGCAAGCCAATGAGAATGCTACATTACTTTTCCAATGCTTAGTGAGATCAACACTTTGT
ACAAAATTTGTATCTGAAGAACATAGATTATCTAGTGTAGCATTTGAATGGCTTATCGGG
GAAATAGAGGCAAGATTCCAGCAAGCACAAGTAAATCCAGGTGAAATGGTAGGCGCTTTA
GCTGCTCAATCACTTGGTGAGCCAGCTACTCAGATGACATTGAATACCTTCCATTTTGCT
GGTGTATCATCCAAAAATGTAACACTTGGTGTGCCTCGTCTGAAGGAAATCATCAACATT
TCTAAGAAACCAAAGGCTCCTTCTCTAACTGTATTTTTGACCGGTGGAGCAGCCAGAGAT
GCCGAAAAAGCCAAAAACGTTCTCTGTAGATTAGAACATACAACTTTACGTAAAGTTACT
GCTAACACGGCTATTTATTATGACCCTGATCCTCAGAATACTGTTATTGCAGAGGACCAA
GAATTTGTCAATGTTTACTACGAAATGCCTGACTTTGATCCTGCGAAAATTTCGCCTTGG
TTATTGCGTATTGAACTGGACCGTAAGAGAATGACCGACAAGAAATTAACAATGGAACAG
ATTGCTGAGAAAATTAATGCTGGTTTTGGTGATGATCTCAATTGTATCTTCAATGATGAC
AATGCTGAAAAATGTATTGAAGCAAACATGCTGTCTGATATGACTTTGCAAGGCATTGAG
GCTATTGCAAAAGTGTATATGCATTTACCACAGACAGAAGCTAAGAAACGTATAACTATA
ACTGAACAGGGAGAGTTCAAAGCTATAGCAGAATGGTTATTGGAAACAGACGGCACATCT
CTTATGAAAGTGCTCTCAGAGCGTGATGTGGATCCAATCAGAACTTTTAGTAACGACATT
TGTGAGATATTCCAAGTGCTTGGAATTGAAGCTGTACGAAAATCCGTCGAAAAAGAAATG
AATGCGGTTTTGCAGTTCTACGGTCTATACGTGAATTATCGACACTTGGCATTGCTTTGT
GACGTCATGACAGCAAAAGGTTATCTTATGGCCATCACACGTCACGGCATTAACCGACAG
GACACTGGTGCTCTTATGAGATGTTCATTTGAGGAAACCGTCGATGTTTTATTGGACGCT
GCCAGTCATGCTGAAGTGGATCCTATGAGAGGAGTATCAGAAAATATTATAATGGGACAG
TTGCCGAGAATGGGTACTGGTTGCTTCGATTTATTACTTGATGGCGAGAAGTGCAAGGAA
GCAATGGGCGGTCTTGGAGGCGCAGAAGTGGGAATGTATTTCGGTGTCGGAACGCCATCT
ATGTCACCACTTATGACTCCCTGGTCTACACAGAATACACCAGGATATGGAAGCAGCGTG
TGGTCTCCATGTCAAGTTGGCAGCAGTATGACTCCTGGAGGACCATCATTCTCGCCATCT
AACGCATCTGACGCATCAGGACTCTCACCGGCATACAGTAATGCTTGGTCACCACAACCT
GGTTCACCAGGATCTCCCGGACCTCCGCTTTCACCTTACTCGTCGCCCGCAGGAGCGTCA
CCATCTTACTCCCCATCGAATCCTGTTTACGCTCCCGCGTCCCCGAGTATTACTCCAACA
TCACCACATTATTCACCTGCCAGTCCTTCTTACTCTCCAACTTCACCCAATTATTCCCCG
ACTTCACCAATATACTCGCCAACATCACCCAGCTACTCGCCAACATCGCCTGGTTATTCG
CCCACATCCCCATTATACTCCCCAGCTTCTCCTAGATACTCTCCGTCATCTCCCAACTAT
TCACCAGCAAGTCCGGCTTATTCAACAACTTCTAATTTCCCGACAACTTCACCTAACTAT
TCTCCATCAAGTCCTTCGTATTCTCCCACGAGTCTATCGTATTCTCCAACGAGCCCAGGT
TATTCCACATCCCCTGGCTATTCGCCCTCGTCACCTAGATATTCACCAAATAGTCCTGTC
TACAGTCCTACTTCATCAAATTATTCGCCTTCGTCTCCAAATTACACTTCTGGATCTGTT
TATTCACCTACGAGTCCTACATATTCACCTACTTCTCGCTCATATTCTCCATCATCACCG
AGCTATTCGCAGTCTTCTCCAAATTATTCACCCTCGTCACCGAATTANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTATTCTCCATCATCTCACAATTATTCACGTTCATCTCCCCGGAATTCCC
CAGGATCATCAAAATATTCCCCGACATCGCCTACTTTTACTCCTACTTCTCCCAATTATT
CTCCGAGCTCTCCTGCGTATTCTTCCACTGGTGGACCATCTACCTATTCTCCAACTTCAC
CAACATATTCATCTACTTCACCCAATTATGATGATGGTGACGACTGAATTGAAAATGTTT
TTTTTTACTATAATGTACTATAATTTCTACTATACCTCCATAATATACTAA
(5571 bp)

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