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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA003365-TA
JBrowseBomo_Chr15
chromosome_No.
Scaffold_id
Scaffold Length		chromo15
Bm_scaf42
3822572 bp
UniRef
UniRef50_UPI0000D55FEB (56%/559)
Cluster: PREDICTED: similar to integrator complex subunit 4; n=1; Tribolium castaneum|Rep: PREDICTED: similar to integrator complex subunit 4 - Tribolium castaneum
Ontology
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
Orthologue
Sequence
(Amino Acid)
MAAVLKKRALAEYNKSFQDAPPSKKLHLAKKPLIGSSAAAFVGLLEKCKSSDEALQFLLR
ISDCLQFQESDVEEAIKKLSKHFQSEEESVVRVKILWLFCDIGLEVPCANLNNLIDETIH
LIKNETSHKVIGQGIATLTKLAKKLSDDKILMMRLVGVAKDNLKDTSHQVKCRCLQLISE
LYPIHPDSDRTSEMTAEAEAIVKLLGDYSNSEDARVRCEAFQALLTLHQRGQILGSNLYE
HVCVALSDDYEIVREVALKLIWVLGNKYPENVITLQDDETTIRMVDDAFVRICSAVNDLC
MQVRALACTLLGTTRAVSDRFLLQTLDKQLMSNMKKKRTAHERGAELVRSGAWASGRRWA
DDAPGALVPSAAVQLLPGGAAGAFVHGLEDELMEVRTAAVEALCQLSLENPVFATTSLDF
LVDMFNDEIEEVRLRAIDALTRISHHIVLREDLLETILGALEDYSMDVREGLHRLLGSCT
VASKTCLEMCIDKILENLKRYPQDKRSTFRCVQRLGSSHATLVLPLTTRLLAVHPFFDMP
EPDVEDPACIL
(551 a.a.)
Sequence
(Nucleotide)
ATGGCTGCAGTTTTAAAGAAGAGAGCCCTGGCAGAATACAATAAATCATTTCAGGATGCT
CCACCATCGAAGAAGCTGCATTTGGCAAAGAAGCCGTTAATAGGTAGTTCTGCTGCTGCC
TTTGTGGGTCTTCTAGAGAAATGCAAGTCCAGCGATGAAGCGTTGCAGTTTTTACTCAGA
ATATCCGACTGTCTTCAGTTCCAAGAGTCCGACGTAGAGGAAGCAATAAAGAAGTTGTCA
AAACATTTTCAGTCGGAAGAAGAGTCTGTAGTCAGAGTAAAAATACTATGGCTTTTTTGT
GACATAGGCTTGGAGGTTCCCTGTGCAAACTTGAATAACTTGATAGATGAAACCATACAT
TTAATAAAAAACGAAACGTCACACAAGGTTATCGGTCAAGGAATAGCAACACTGACAAAA
CTTGCCAAGAAATTGAGTGACGATAAAATTTTAATGATGAGGCTAGTTGGTGTTGCTAAA
GACAATTTGAAAGATACTAGCCATCAGGTGAAATGTAGGTGTCTACAGCTCATCAGTGAG
TTGTACCCTATACATCCGGACTCTGATAGAACATCTGAGATGACAGCAGAGGCTGAAGCT
ATTGTAAAACTTCTTGGAGATTATTCTAATTCTGAGGATGCCAGAGTGCGTTGTGAAGCA
TTTCAAGCACTGTTAACACTTCATCAAAGAGGACAGATCTTAGGATCTAATTTGTACGAA
CATGTTTGTGTTGCTCTGTCCGATGACTATGAAATAGTAAGAGAAGTTGCCCTAAAGTTG
ATTTGGGTACTTGGAAATAAATACCCAGAAAATGTAATAACGTTACAAGATGACGAGACC
ACGATACGAATGGTCGATGACGCTTTTGTTCGCATATGTTCGGCCGTGAACGATCTATGC
ATGCAAGTGCGAGCGCTCGCCTGCACGCTGCTCGGCACCACGCGCGCCGTTTCCGATCGC
TTCCTGTTGCAGACCCTCGATAAACAACTAATGAGTAACATGAAGAAAAAGCGCACAGCA
CACGAGCGCGGCGCGGAGCTGGTCCGCAGCGGCGCGTGGGCGAGCGGGCGGCGCTGGGCG
GACGACGCGCCCGGCGCGCTGGTGCCGTCCGCCGCCGTGCAGCTGCTGCCGGGCGGGGCG
GCCGGCGCCTTTGTGCACGGACTCGAGGACGAACTCATGGAGGTGCGCACGGCAGCCGTC
GAAGCATTGTGTCAACTCTCACTAGAAAACCCGGTGTTCGCGACCACCTCCCTCGACTTT
TTGGTGGACATGTTCAATGACGAGATCGAGGAAGTGCGGCTGCGAGCCATCGACGCCCTC
ACGAGGATCTCGCATCATATCGTACTTAGAGAAGACCTACTGGAGACCATACTAGGAGCC
TTGGAGGATTATTCAATGGACGTCAGGGAAGGTCTACACAGACTGCTGGGCTCGTGTACA
GTCGCGTCCAAAACATGCCTGGAGATGTGCATTGATAAAATTCTGGAGAATCTCAAAAGA
TATCCACAGGATAAGCGTTCGACATTCCGTTGCGTGCAGCGGCTGGGCAGCTCGCACGCG
ACCCTGGTGCTGCCGCTGACCACGAGGCTGCTGGCCGTGCACCCTTTCTTCGACATGCCT
GAGCCAGATGTTGAGGATCCAGCTTGTATCCTTTGA
(1656 bp)

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