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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA003305-TA
JBrowseBomo_Chr15
chromosome_No.
Scaffold_id
Scaffold Length		chromo15
Bm_scaf42
3822572 bp
UniRef
UniRef50_Q05913 (49%/282)
Cluster: Transcription initiation factor IIF subunit alpha; n=5; Endopterygota|Rep: Transcription initiation factor IIF subunit alpha - Drosophila melanogaster (Fruit fly)
Ontology
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003702 F obsolete RNA polymerase II transcription factor activity
GO:0003824 F catalytic activity
Orthologue
Sequence
(Amino Acid)
MERENNSKEFKGAEEEMPKFGAGSEYGRDMREEARRKKFGIISRKYKPEDQPWILKVGGK
TGKKFKGIREGGVSENAAYYVFTHAADGAIDAYPLQEWYNFQPIQRYKALSAEEAEQEFG
RRNKVMNFFSLMLRKRLRGVDDADEEDPDEKKAKGKAKKGTQFPVFKARGKRFIDLKISE
MDEWIDSDDASSDSGAGEKEKEEDSDSGAKKKKKGKGPPPKKKRKVNDEAFEESDDGDEE
GREKDYVESDHETKTNKELKGVAEEDALRKLLTSDEDSEEEQEQKQESEHEDEPTKEGEE
RASKLTKKKKKTDETKKDSSSDFSSDSDTEPEAGNTKKPKKSKNADKNAGAGASGAAGGG
GAGAAGGEAAAPSAAAAAVAAAAAASAQQPPSKRPKLDASYTECGVTEEAVRRYLARKPM
TTTELLTKFKSKRTGVSSERLVETMTQILKRINPLKQNINGKMYLSIK
(468 a.a.)
Sequence
(Nucleotide)
ATGGAGCGAGAGAACAACAGCAAAGAATTCAAAGGAGCTGAAGAGGAAATGCCCAAATTT
GGTGCAGGCTCGGAATACGGACGGGACATGCGTGAGGAAGCACGTCGCAAGAAATTCGGT
ATAATATCAAGAAAGTACAAACCGGAAGACCAGCCGTGGATCCTGAAAGTCGGTGGAAAG
ACCGGCAAGAAATTCAAAGGTATTCGTGAAGGTGGAGTATCAGAGAATGCTGCATATTAT
GTGTTCACTCACGCAGCGGATGGCGCAATAGACGCCTATCCACTCCAGGAATGGTACAAT
TTCCAACCGATTCAGAGATACAAAGCGCTGTCAGCTGAAGAAGCCGAACAGGAATTTGGC
AGGCGTAACAAGGTTATGAATTTCTTCTCGTTGATGTTACGGAAACGGCTCCGCGGAGTC
GACGATGCAGACGAAGAGGACCCAGACGAAAAGAAAGCTAAAGGGAAAGCTAAAAAAGGT
ACTCAGTTTCCGGTATTCAAAGCCAGAGGAAAACGTTTCATAGACCTCAAGATATCCGAG
ATGGACGAATGGATAGACTCCGACGACGCTTCCTCGGACTCCGGTGCTGGTGAAAAAGAA
AAGGAAGAGGACAGTGACTCCGGGGCCAAAAAGAAGAAAAAGGGTAAAGGTCCGCCCCCC
AAGAAGAAGCGAAAAGTAAATGACGAAGCGTTCGAAGAGAGCGACGACGGGGACGAGGAG
GGTCGGGAGAAGGACTACGTTGAATCGGATCACGAAACTAAAACTAATAAGGAACTCAAA
GGAGTGGCAGAAGAAGACGCGCTCAGGAAACTGCTGACTTCCGACGAAGACTCCGAAGAG
GAGCAGGAGCAGAAACAGGAGTCGGAACACGAGGACGAGCCCACGAAGGAAGGCGAAGAG
AGAGCCAGCAAGCTCACCAAGAAAAAGAAGAAAACTGACGAAACTAAAAAAGATTCGAGC
AGCGACTTCAGTTCGGACTCTGACACGGAGCCCGAGGCTGGCAACACAAAGAAGCCGAAG
AAGAGTAAGAACGCCGACAAGAACGCGGGCGCCGGTGCCTCGGGAGCAGCGGGCGGCGGC
GGGGCGGGGGCTGCGGGCGGGGAGGCGGCGGCTCCCAGCGCGGCGGCGGCGGCGGTGGCG
GCGGCGGCGGCGGCGAGCGCGCAGCAACCGCCCAGCAAGAGACCCAAGCTCGACGCCTCG
TACACCGAATGCGGGGTGACGGAAGAGGCGGTGAGAAGGTACTTGGCGAGGAAGCCGATG
ACCACGACTGAGCTGCTCACCAAGTTCAAATCGAAACGCACCGGAGTCAGCAGCGAGCGC
TTGGTCGAAACCATGACGCAGATACTGAAGAGGATCAACCCTTTGAAGCAGAACATCAAC
GGGAAGATGTACCTCAGCATTAAATGA
(1407 bp)

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