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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA002952-TA
JBrowseBomo_Chr4
chromosome_No.
Scaffold_id
Scaffold Length		chromo4
Bm_scaf13
6731059 bp
UniRef
UniRef50_O15943 (79%/1622)
Cluster: Neural-cadherin precursor; n=42; Arthropoda|Rep: Neural-cadherin precursor - Drosophila melanogaster (Fruit fly)
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
Orthologue
Sequence
(Amino Acid)
MTGAIYVAGALDYETRKRYELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQIT
EEDDRNLPKRVLQYELTLVASDGRNENSTHVVIRILDVNDLPPKFTRTVYVTQILEETGP
FPRSLIQVTATDGDKDRQQNIVYFLTGQGIDPDNPANSKFDINRTTGEIFVLKSLDRDQP
NGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGTAGMVVM
TMTAIDYDDPAESNNAKLWYSIEKNVIEEETGSPIFEIEPETGVIKTAVCCLDRERTPDY
SIQIVASDGGGLKGTGTASIRVKDINDMPPQFTKDEWFTEVDETDGTNLPEMPILTVTVH
DEDETNKFQYKVIENSGYGADKFTMVRNNDGTGSLKIVQPLDYEDQLQSNGFRFRIQVND
KGEDNDNDKYHVAYSWVVVKLRDINDNKPQFERANIEVSVYENAEVGKSLETFKATDPDQ
GGKSKVSYAIDRSSDRKRQFSINQEGTVSIQRSLDREDTPRHQVKILAIDDGVPPRTATA
TLTVIVQDINDNAPTFLKDYRPVLTEHITPKKVAEILATDDDDRSKSNGPPFQFRLDPGA
DDIIRASFKVEQDQKGANGDGMAIVSSLRSFDREQQKEYLIPIIIKDHGNPAMTGTSTLT
VVIGDVNDNKMQPGSKDILVYSYQGLSPDTEIGRVYVYDLDDWDLPDKKFFWENTENPNF
TLNEETGMITMKQKTREGRYHLKFKVYDRKHTQTDVPANVTVYVKEISHEAIINSGSIRI
SGISDEDFIRVWNYKTLSVSRSKLDIFKDKLADLLNTERENIDIFSVQLRKKHPPVTDIR
YAAHGAHYYKPVRLNGIVLMHREEIERAVGINITMVGIDECLYENQMCEGSCTNTLDISS
LPYMVNANKTALVGVRVDVIGQCTCGARNFTQAETCRNSPCYNGGRCIDGKYGLTCSCPP
GYTGPRCQQTSRSFRGTGWAWYPSLEMCDDSHLSFEFITRKSEGVLIYNGPIVPPESEEI
MVSDFISIELERGNPRLLIDFGSGTLELRVKAKKSLDDGEWHRIDIFWDTENVRMIVDYC
KSADIQEMEDGTPPEFDDSTCQATGTIPPFNEYLNVNAPLQVGGLYIEHFDPTHYHWQYM
PIGKGFDGCIRNLIHNSKLYDLAHPGLSRNSVAGCPQTEEVCNQADTTSRCWEHGTCVGS
FSEARCQCQPGWTGPSCNLPTTPTSFRPQSYVKFALSFEPDRFSTQIQLRFRTREPHGEL
FRVSDQHNREYGILEVKDARLHFRYNLNSLRTEERDVWLNSVAVDDGQWHIARVSRYGSA
ATLEIDGGEGRRYNETFTFEGHQWLLVDKQEGVYAGGKAEYTGVRTFEVYADFQKGCLDD
IRLEGKHLPLPPAMNGTQWGQATMARNLDRNCPSNSPCINVHCTEPFVCVDLWNEYECTC
GEGLTLTSDSKNCIDKNECLYFPCRNGGSCVNREPGYRCHCPEGFWGENCELVQEGRTLK
LSMGALAAILVCLLIIMILVLVFVVYNRRREAHIKYPGPDDDVRENIINYDDEGGGEDDM
TAFDITPLQIPIGGPLPDHAPAKLPYPLIGVGLGVGPIGVGVGVPPGVGMPMPGETNVGL
FIEEHKRRADSDPNAPPFDDLRNYAYEGGGSTAGSLSSLASGTDDEAHDYDYLGAWGPRF
DKLADLYGPDLDEQL
(1695 a.a.)
Sequence
(Nucleotide)
ATGACAGGCGCGATTTACGTAGCCGGCGCCCTTGATTACGAGACTAGGAAACGGTACGAG
CTGAAGTTAGCGGCGTCCGACAACCTAAAGGAAAACTACACAACGGTGGTGATTCACGTG
AAAGACGTCAATGACAACCCTCCAGTTTTCGAGCGACCTACGTACCGCACACAGATCACC
GAGGAAGATGACCGCAATCTTCCAAAACGCGTTCTTCAGTACGAGTTGACGCTGGTGGCT
TCGGATGGGCGCAACGAGAACTCAACACACGTTGTCATACGGATACTGGATGTCAACGAC
CTGCCGCCCAAATTTACGCGCACTGTCTACGTCACGCAGATTCTCGAAGAGACAGGACCC
TTCCCACGTTCCCTAATACAGGTAACTGCAACCGACGGCGATAAAGATAGGCAGCAAAAC
ATTGTCTATTTTCTGACTGGTCAAGGCATCGACCCAGACAATCCTGCAAACAGTAAATTC
GACATTAATCGCACTACGGGAGAGATATTCGTATTAAAATCCTTGGATCGTGATCAACCA
AATGGGCGACCGCAGTGGAGATTCACTGTATTTGCACAAGACGAAGGCGGTGAAGGACTC
GTGGGCTACGCAGACGTTCAAGTTAATCTAAAAGATATTAATGATAATGCGCCTATTTTC
CCTCAAGGCGTATACTTTGGTAATGTTACGGAAAATGGTACAGCTGGGATGGTTGTTATG
ACGATGACGGCTATAGATTACGATGATCCAGCTGAAAGTAATAATGCGAAGCTTTGGTAC
TCTATAGAAAAAAATGTTATTGAAGAAGAGACAGGATCGCCTATATTTGAGATCGAGCCA
GAAACTGGTGTAATAAAAACTGCTGTCTGTTGTCTAGATCGAGAAAGAACCCCAGATTAT
TCAATTCAAATAGTAGCATCAGATGGAGGCGGTCTAAAAGGAACTGGTACAGCATCAATT
AGAGTTAAGGACATAAATGATATGCCGCCTCAGTTTACTAAAGATGAATGGTTTACAGAA
GTAGATGAAACAGACGGAACTAATTTACCAGAAATGCCCATCTTAACTGTGACCGTTCAC
GATGAAGATGAAACTAATAAATTTCAGTATAAAGTTATTGAAAATAGCGGTTATGGTGCT
GATAAGTTTACTATGGTTAGGAATAATGACGGGACAGGTTCATTAAAAATTGTACAGCCT
TTAGATTATGAAGACCAGTTACAGAGTAATGGTTTCAGGTTTAGAATACAAGTTAACGAT
AAAGGAGAAGATAATGACAATGATAAATATCATGTAGCTTATTCATGGGTTGTGGTTAAA
CTTAGAGATATAAACGACAATAAACCTCAATTTGAAAGAGCCAATATTGAAGTATCTGTG
TACGAAAATGCAGAGGTGGGTAAAAGCTTAGAAACCTTTAAAGCAACTGATCCTGATCAA
GGAGGAAAAAGCAAAGTATCTTACGCGATTGACAGATCGTCTGATAGGAAAAGACAATTT
TCAATCAACCAAGAAGGAACTGTCAGTATACAAAGATCATTAGATAGGGAAGATACACCT
CGACATCAAGTAAAAATTTTAGCTATAGACGATGGTGTTCCTCCACGAACAGCAACTGCT
ACTCTCACAGTTATTGTACAGGACATTAATGATAACGCACCGACATTTTTGAAAGATTAT
AGACCTGTTTTAACGGAACATATTACACCAAAAAAAGTAGCCGAGATTTTAGCTACAGAT
GACGATGACAGATCTAAAAGCAACGGTCCACCATTTCAATTTCGTCTAGATCCCGGTGCT
GACGACATAATAAGAGCTTCTTTTAAAGTTGAACAAGATCAAAAAGGAGCAAATGGAGAT
GGCATGGCGATTGTTTCTTCACTACGTTCTTTTGATCGAGAGCAACAGAAGGAATATTTA
ATTCCCATAATCATCAAAGATCATGGGAATCCTGCTATGACTGGAACTAGTACTTTAACT
GTAGTTATTGGAGATGTAAATGATAACAAGATGCAACCAGGTTCCAAAGACATCTTAGTG
TATAGTTATCAAGGTCTGTCACCTGATACTGAAATTGGGCGTGTCTATGTATACGATTTA
GATGATTGGGATTTGCCAGATAAAAAATTCTTCTGGGAAAATACTGAAAATCCGAATTTC
ACTTTAAACGAAGAAACTGGTATGATTACAATGAAACAAAAAACAAGAGAAGGAAGATAC
CATTTGAAATTCAAAGTATATGATAGAAAGCACACACAAACAGATGTGCCTGCAAACGTA
ACTGTTTACGTTAAGGAAATATCACATGAAGCCATAATAAACTCAGGTTCTATTAGAATA
TCTGGAATATCTGATGAAGATTTTATAAGAGTGTGGAATTATAAAACTCTCAGCGTTTCA
AGAAGTAAATTAGACATATTCAAAGATAAATTAGCGGATCTTTTGAATACGGAAAGAGAA
AATATAGATATATTTAGTGTTCAACTCAGGAAAAAACATCCACCCGTAACTGATATTCGA
TACGCTGCCCACGGAGCACATTATTATAAACCAGTAAGATTAAATGGTATTGTATTGATG
CACAGAGAAGAGATTGAAAGGGCGGTCGGAATAAATATAACCATGGTCGGAATCGATGAA
TGTCTCTATGAAAATCAAATGTGCGAAGGTTCATGCACTAATACATTGGACATAAGCAGC
TTACCCTACATGGTAAATGCAAATAAGACCGCTCTTGTTGGTGTGCGCGTTGATGTCATA
GGACAGTGTACATGCGGTGCACGTAATTTTACTCAAGCTGAAACATGTCGCAATTCACCA
TGCTATAACGGCGGTAGGTGTATTGACGGAAAATATGGACTAACTTGTTCATGTCCACCT
GGTTATACTGGGCCGCGATGTCAGCAAACGTCAAGGAGTTTCAGAGGAACGGGGTGGGCT
TGGTACCCATCTCTAGAAATGTGTGATGATTCACATCTAAGTTTTGAATTTATAACAAGA
AAGTCCGAAGGTGTTTTAATCTACAACGGACCCATTGTTCCACCTGAGTCCGAAGAAATC
ATGGTATCCGATTTCATATCTATAGAATTAGAAAGAGGCAATCCAAGATTGTTGATTGAT
TTCGGATCGGGTACCTTAGAATTAAGAGTGAAAGCAAAGAAATCTTTGGATGATGGAGAA
TGGCATCGAATCGATATATTTTGGGACACTGAAAACGTAAGAATGATTGTAGACTATTGT
AAATCAGCTGATATCCAAGAAATGGAAGATGGCACTCCACCCGAATTCGACGATTCTACA
TGTCAAGCAACTGGGACGATTCCTCCATTCAATGAATATTTAAATGTAAATGCTCCACTT
CAAGTCGGTGGTTTATATATAGAACACTTTGACCCTACACATTATCACTGGCAGTATATG
CCAATCGGCAAAGGATTTGACGGATGTATTCGTAATTTGATCCATAACAGTAAACTGTAT
GATTTAGCTCATCCGGGTCTTTCTCGAAATTCAGTAGCAGGATGCCCACAGACAGAGGAA
GTGTGTAATCAAGCTGATACAACATCTAGATGCTGGGAGCACGGAACTTGTGTTGGGAGT
TTTTCGGAAGCGAGATGTCAATGTCAGCCAGGTTGGACTGGTCCTTCGTGCAATTTACCA
ACAACGCCCACCAGTTTCAGACCCCAAAGCTATGTAAAATTTGCTTTAAGTTTCGAACCG
GACCGATTTAGTACACAGATTCAGTTGCGTTTTAGAACACGGGAGCCTCACGGTGAATTA
TTCAGAGTGAGCGATCAACACAACCGCGAATATGGAATATTGGAAGTAAAAGACGCTCGT
CTACATTTCCGATATAACCTTAATTCCTTGAGAACCGAAGAACGTGATGTGTGGTTAAAT
TCTGTCGCTGTCGATGATGGCCAATGGCACATTGCTCGGGTCAGTAGATATGGAAGTGCT
GCGACACTAGAGATAGATGGCGGTGAGGGACGACGGTACAACGAAACATTTACATTTGAA
GGTCATCAGTGGCTTCTTGTAGATAAACAAGAAGGTGTTTACGCTGGCGGAAAAGCCGAA
TACACTGGAGTGAGAACCTTTGAAGTATATGCCGATTTCCAAAAAGGTTGCTTGGATGAT
ATAAGATTGGAAGGAAAACATTTACCTTTGCCGCCGGCTATGAATGGAACGCAGTGGGGT
CAAGCAACAATGGCCCGTAATCTCGACCGCAATTGTCCTTCAAACAGTCCTTGCATTAAC
GTGCACTGTACGGAACCCTTTGTATGCGTCGATCTGTGGAACGAATACGAATGCACTTGC
GGTGAGGGTTTGACTTTAACATCAGACTCAAAGAATTGCATTGACAAGAACGAGTGTCTC
TACTTCCCTTGTCGCAACGGAGGCTCTTGCGTCAATCGCGAGCCGGGCTACCGTTGTCAC
TGCCCGGAAGGGTTCTGGGGCGAGAACTGCGAGCTCGTACAAGAAGGTCGCACTTTGAAA
CTCAGCATGGGAGCGCTGGCAGCCATCCTCGTCTGCCTTCTCATTATAATGATATTGGTG
TTGGTATTCGTGGTGTATAATCGACGTCGCGAGGCACATATCAAGTACCCCGGTCCTGAT
GATGACGTTCGCGAGAACATCATTAACTACGATGACGAAGGTGGCGGTGAAGACGATATG
ACCGCTTTCGATATCACCCCTCTGCAGATACCGATTGGAGGACCTCTGCCCGATCACGCA
CCCGCTAAACTACCATATCCATTGATAGGCGTTGGCTTAGGCGTTGGTCCAATTGGCGTT
GGAGTGGGGGTGCCTCCCGGTGTTGGGATGCCGATGCCCGGCGAAACCAACGTTGGTCTG
TTCATCGAGGAACACAAACGGCGCGCTGACAGTGACCCTAACGCACCGCCCTTCGACGAT
CTGCGTAACTACGCTTACGAAGGCGGCGGCAGCACTGCTGGATCATTATCCTCGCTCGCT
TCTGGCACCGACGACGAGGCCCACGACTACGACTACCTGGGGGCCTGGGGTCCGAGGTTC
GACAAACTCGCCGATCTGTACGGGCCCGACCTCGACGAGCAACTGTAA
(5088 bp)

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