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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA002950-TA
JBrowseBomo_Chr4
chromosome_No.
Scaffold_id
Scaffold Length		chromo4
Bm_scaf13
6731059 bp
UniRef
UniRef50_O15943 (90%/786)
Cluster: Neural-cadherin precursor; n=42; Arthropoda|Rep: Neural-cadherin precursor - Drosophila melanogaster (Fruit fly)
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
Orthologue
Sequence
(Amino Acid)
MQTVVQLNAAPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQ
LDMEYVLYVKAEDQNGRVDERRFQSTPEERLSIVGGKRAPQFYLPSYEAEIAENQKKDSD
IISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLVVTA
TEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILKVKAMDADSGKN
AEIEYLVSDDHFSVDSNGIITNNKLLDADNNNAYYEFVVTAKDKGEPAKTGTATVRVYTK
NKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVRFGFVGGGTSSGQFVIEEI
TGVIRLHNKAISLDRDKYELNVTAMDDGACCVNGDATIHTSTAVVVVFITDVNDNKPIFK
DCPTYFPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGEVS
TNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQ
DASIGTNILRVSASDEDADNNGAIVYTLSSPYNLADIEYFEIQPESGWIVLKKPLDRETY
KLEAMAQDKGFPPLSRTVEVQIDVVDRANNPPVWDHVVYGPIYIRENLPVGAKVVSVKAS
SGIENNPTVFYRLMPGSTAQTNKFHTFYLQQRADNGNTWADIKVNHPLDYESIKEYNLTI
RVENNGAQQLASEATVYIMLEDVNDEIPLFTEREQETVLEGEPIGTKVTQVNAIDKDGTF
PNNQVHRLTLPEHRLRTTGF
(800 a.a.)
Sequence
(Nucleotide)
ATGCAGACTGTAGTGCAGCTGAATGCTGCTCCAAACACACCAGTCTTCACGCTTCAAGCC
AGGGACCCTGACTCCGACCATAATATCCATTACTTCATCGTTCGAGACAGAACCGGTGGA
AGATTCGAAGTCGACGAGAGATCCGGAGTCGTCCGTACCAGAGGGACCGACCCGTTTCAA
CTTGACATGGAGTACGTGCTTTACGTCAAAGCGGAGGATCAGAATGGTCGTGTCGACGAA
AGGAGGTTTCAGTCAACTCCCGAAGAACGTCTCAGCATCGTCGGCGGAAAGCGAGCTCCG
CAGTTCTATTTGCCGAGTTACGAAGCTGAAATCGCAGAGAACCAGAAAAAAGATTCCGAT
ATAATATCAGTGAAAGCCAAGTCGTTTGCTGATCGCGAAATCCGGTACACGCTCAAGGCA
CAAGGTCAAGGCGCCGGAACGTTCAACATTGGCCCAACATCGGGTATTGTCAAGTTGGCC
AAGGAGCTGGATTTTGAAGATCTACGGCAACCGCATGTTTATTCTCTCGTCGTCACCGCT
ACGGAAGATTCAGGCGGTTTCTCTACTTCTGTTGAGCTAACAATTAGAGTAACCGACGTA
AATGACAACGCTCCGAAGTTTGAGTTGCCAGATTATCAAGCCCACAATGTTGATGAAGAT
ATACCTCTTGGCACCAGCATTCTCAAGGTCAAGGCTATGGATGCTGATTCCGGAAAAAAC
GCTGAGATCGAATATCTGGTTTCAGATGACCACTTCAGCGTCGATTCGAACGGCATAATC
ACCAATAACAAACTACTGGATGCTGACAACAATAACGCTTATTACGAATTTGTAGTCACA
GCGAAAGATAAGGGCGAACCCGCTAAAACTGGAACGGCTACCGTCCGAGTTTATACGAAG
AATAAGAACGACGAGGAACCAAAATTCTCTCAACAAGTTTACACTCCGAATGTAGACGAA
AACGCAGGACCGAACACCTTAGTCACGACCGTAGTCGCTTCGGATAAAGACGGCGACAAC
GTGAGGTTTGGTTTTGTTGGAGGCGGTACAAGTTCAGGTCAATTTGTCATAGAAGAAATA
ACTGGTGTTATCCGACTGCACAATAAAGCTATCTCATTAGACCGTGACAAATACGAACTG
AACGTGACCGCTATGGACGACGGCGCTTGTTGTGTTAACGGTGACGCCACTATACACACC
TCCACGGCTGTAGTGGTCGTATTTATAACAGACGTGAACGACAATAAACCTATATTCAAA
GATTGTCCAACTTACTTTCCGAAAGTAGAAGAGGGCGCGCCTAATGGGAGTCCCGTTATA
AAGGTGCACGCCACCGACGAGGACAAAGGTGTTAACGGTCAAGTAAAATATTCTATAGTG
CAACAGCCCAATCAGAAAGGAACAAAGTTCACGGTGGACGAAGAAACAGGTGAAGTGTCG
ACGAACAAAGTTTTCGATCGCGAAGGCGACGACGGTAAATTCGTATCGGTAACGGTAAAG
GCAACCGATCAGGGCGAACCTTCTTTAGAAGGCGTGTGTTCATTCACTGTTGAGATTACC
GATGTCAACGACAACCCTCCGCTCTTTGACCGTCAAAAATATGTGGAGAATGTCAAACAA
GATGCCAGTATTGGCACAAACATATTAAGAGTTTCGGCATCTGACGAGGACGCTGATAAT
AACGGCGCTATTGTTTACACACTGAGTTCCCCGTACAATCTTGCCGACATTGAATATTTT
GAAATCCAGCCCGAGTCGGGCTGGATCGTTCTTAAAAAACCACTCGACCGAGAAACTTAC
AAGTTGGAGGCTATGGCTCAAGACAAGGGTTTCCCGCCCTTGTCCCGAACCGTGGAGGTC
CAGATAGACGTAGTGGATCGCGCGAACAATCCCCCCGTGTGGGACCACGTGGTGTACGGC
CCGATCTACATTCGAGAGAATTTGCCCGTGGGTGCCAAAGTGGTGTCCGTGAAAGCAAGT
TCCGGAATCGAGAACAACCCTACGGTGTTCTACAGACTGATGCCGGGGTCAACTGCGCAA
ACCAATAAATTCCACACGTTTTACCTCCAGCAGAGGGCCGACAATGGTAACACGTGGGCG
GATATTAAAGTAAACCATCCTTTGGATTACGAAAGCATTAAAGAGTACAACTTAACGATC
AGAGTTGAGAACAACGGTGCGCAACAACTGGCTTCAGAAGCGACTGTCTACATCATGTTA
GAAGACGTCAACGATGAAATTCCTCTGTTTACTGAACGAGAGCAAGAGACCGTGCTGGAA
GGAGAGCCGATTGGTACCAAGGTCACCCAGGTCAACGCTATCGACAAAGATGGAACATTC
CCGAATAATCAGGTGCACAGGCTTACCCTCCCGGAACACAGATTACGAACCACCGGTTTC
TAA
(2403 bp)

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