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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA002714-TA
JBrowseBomo_Chr5
chromosome_No.
Scaffold_id
Scaffold Length		chromo5
Bm_scaf20
5834375 bp
UniRef
UniRef50_Q28XN3 (66%/112)
Cluster: Syndecan; n=2; Diptera|Rep: Syndecan - Drosophila pseudoobscura (Fruit fly)
Ontology
GO:0008092 F cytoskeletal protein binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
Orthologue
Sequence
(Amino Acid)
MDDAAVAESPSINLSLPLNDGVASDQSTFVDADEGSGLETDESSGSGWGAGPGPDDEDSS
GEAPTDHDELPPDDEDYTTSTDAAPTDDHERKLISDFYDETEVEIEKESEQTDTPITPAT
PVTEPPPLEPEIHPEVFVPVNKPSGGEVEPHGAGEERPSRPDQNGEINISEEDTNPAIDQ
EQAGTNVDPDSRPSEVFIMNAKPEDRAISFFAQPGILAAVIGGAVVGLLCAILVVMFIVY
RMRKKDEGSYALDEPKRSPAAASYGKGHNNREFYA
(275 a.a.)
Sequence
(Nucleotide)
ATGGATGACGCAGCTGTCGCTGAATCGCCGTCAATCAACTTATCGCTTCCACTGAACGAC
GGCGTCGCGTCAGACCAGAGCACGTTCGTCGACGCCGATGAAGGTTCCGGCCTAGAGACA
GACGAGAGCTCGGGCTCCGGTTGGGGAGCCGGCCCCGGGCCCGACGACGAGGACAGCTCA
GGTGAAGCGCCCACCGACCACGATGAACTACCACCAGACGACGAGGATTACACGACCTCG
ACCGACGCGGCTCCCACCGATGACCACGAGAGGAAACTCATTTCGGACTTCTACGACGAA
ACCGAAGTAGAAATAGAAAAAGAGTCCGAACAAACAGATACCCCGATCACCCCGGCCACC
CCGGTCACTGAACCTCCGCCTCTAGAGCCCGAAATACACCCAGAAGTATTTGTTCCTGTG
AACAAACCAAGCGGGGGTGAGGTGGAACCGCACGGCGCGGGGGAGGAGCGACCCTCGCGC
CCTGATCAGAACGGCGAAATCAACATCTCTGAAGAAGACACCAATCCGGCAATTGACCAG
GAGCAGGCGGGCACTAACGTGGATCCTGATTCGCGGCCGTCAGAAGTGTTCATCATGAAC
GCCAAGCCGGAAGACAGAGCGATCAGCTTCTTCGCGCAGCCTGGCATACTCGCCGCTGTG
ATCGGTGGTGCTGTAGTAGGGTTATTATGCGCAATCCTTGTGGTCATGTTCATAGTATAC
CGCATGCGTAAGAAGGATGAAGGTTCCTATGCCCTCGACGAGCCGAAGAGAAGTCCAGCG
GCAGCCTCGTACGGGAAAGGACACAACAACCGCGAGTTCTACGCGTGA
(828 bp)

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