SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA002671-TA
JBrowseBomo_Chr5
chromosome_No.
Scaffold_id
Scaffold Length		chromo5
Bm_scaf20
5834375 bp
UniRef
UniRef50_Q29QQ9 (63%/231)
Cluster: IP10364p; n=8; Endopterygota|Rep: IP10364p - Drosophila melanogaster (Fruit fly)
Ontology
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0003723 F RNA binding
GO:0006396 P RNA processing
GO:0000178 C exosome (RNase complex)
Orthologue
Sequence
(Amino Acid)
MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV
GIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFD
LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL
QLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCAD
KGASNITDVDIKCSTISMNGPGSLAPKTLKNAIHQGM
(277 a.a.)
Sequence
(Nucleotide)
ATGGCAGGACTGTTATTAAGTTCTACAGAAAAAGTTTTTATTGTTCACGGTGTACAAGAG
GACTTTCGTTCCGATGGCCGATCAAACATTGACTATAGGCCCATGGAACTAGAAACAGAT
GTAGTGAGCCACGCAAGTGGCTCAGCGCGGCTTCGTCTAGCAAACACAGACATTTTAGTT
GGCATTAAAACAGAAATAGATACACCAAAGCCAGACAAACCAGATATGGGAAAAATTGAG
TTTTTTGTTGATTGCTCAGCAAATGCCACACCGGAATTCGAAGGGCGTGGTGGAGAAAAT
TTAGCTAGCAGCATTTCAAACACAATGCAAAGAGCATATCACTCATCACAAGCCTTTGAT
TTGAAGCAACTATGCATTGTAGAAGGCAAACAGTGCTGGAAACTTTATGTTGATATATTG
ATCTTGGAATGTGGGGGTAATTTGTTTGATGCAGTTTCATTAGCAACCAAAGCAGCTCTG
TTTAACACAAGGATACCATTAGTAAAAGCCTTGTTGATGGATGGAGGAAATGTTGATTTA
CAACTCTCAGATGATCCTTATGATTTCAAATTTCTAGATGTTGGTTCTGCACCTTTGTTG
GTAACGCTATGTAAAATAGGAGAAAAATGCGTGGTAGATCCCTCAGCTGAAGAAGAAAGC
TGCAGTGTAATATCATTGATAGTTGGAATTACGGGAAACAGCAAATCTTACTGTGCAGAT
AAAGGAGCTTCTAACATAACTGATGTTGACATTAAATGTAGTACAATCAGTATGAACGGA
CCAGGCAGTTTAGCACCAAAGACATTAAAGAATGCAATTCACCAGGGCATGTAA
(834 bp)

- SilkBase 1999-2023 -