SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA002649-TA
JBrowseBomo_Chr5
chromosome_No.
Scaffold_id
Scaffold Length		chromo5
Bm_scaf20
5834375 bp
UniRef
UniRef50_A7QCD4 (36%/1260)
Cluster: Chromosome undetermined scaffold_77, whole genome shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome undetermined scaffold_77, whole genome shotgun sequence - Vitis vinifera (Grape)
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
Orthologue
Sequence
(Amino Acid)
MANVSYHIAHLLEKMTSNDKDFRFMATNDLMTELQKDSIKLDDDSEREVVKMLLRLLEDK
NGEVQNLAVKCLGPLVNKVKEYQVEGIVDTLCANMLSDTEQLRDISSIGLKTVISELPLG
SNTLAANVCKKITGKLSSAIEKQEDVSVQLEALDILADLLSRFGGLLISFHPMLLNSLLP
QLASPRQAVRKRTIVALSHLVMSCNASLYNKLIDHLLEGLSSSTSSSVSRTHIQCIASIC
RQAGHRFGEQLWRVAPSVLEYSKDTDEELREHCLQALEAFVLKCPKEVQPHIPTIIDLCL
KMITYDPNYNYEDEEGVCDDDEEMEDDTYSPDADPESDSEEYSDDDDMSWKVRRAAAKCL
ESVIATRHELLAEMYHTVSPALIARFKEREENVKCDILSAYTALLRATRPPPALQISGTP
ADNSPQALLIQTVSSIVRGALRVIRGRSVRARGCALSLLRELLAAAPGCLSDHVARVVRA
LTPALLDKTTASSMKIETLVFIGCLVRGQGAGMREHAAALLPAVLASVHDPFYKVTAEAL
RVLQLLVKIMRPLVINVYLYTNKQFSVFCTKDNIEGADGEVEVAVEPPPEELKQFIPAMY
ECNLVRLRATDMDQEVKERAIAACGQLLCHFGDYLQNELPVCLPIFLERLRNEITRLTTV
KALTKVASSPLRIDLTPILSDAVPILGSFLRKNQRALKLSTLVLLDTLVQNYSHAISIEL
LSKVLMEVPALVCEQDLHCAQTALALVRSACLRCPAALTADARYALTPKILALAKSPLLQ
GGALKAMLGVLSALVSADVAGCSRRELLALLVMPVRRLQEHNATAHHIKQAFHSLSKCVA
AVVVEGGPEAGEAVRGFLRDAAHPPSDAHHMFSLLALAEIGRHLDLSSVPNLKEVLLNSF
TPSSEEVKSAASYALGSVAVGNLPEFLPFILGEIEAQPKRQYLLLHSLREIISSESCTPE
GVEALRPFIPQIWVQLSKHCQCAEEGSRNVVAECLGKLCLLEPEELLPHLKEFLKSPEPL
TRTTAVTAVKFTISDQPQAIDGLLRGCMCELLVPLRDAELGVRRVALVAFNSAAHNKPSL
VRDLLPQVLPTIYAETKVKKELIREVEMGPFKHSVDDGLDLRKAAFECMYTLLGTCLDRL
DVFEFLRHVEDGLRDHYDIKMLTYLMCARLAQLCPAVVLQRLESLVEPLRATCTMKVKAN
SVKQEYEKQDELKRSALRATAALMQIPEADKNPHLMDFVTQIRSLPELQPIFESILKDSS
GAAGLDSNLMDQS
(1273 a.a.)
Sequence
(Nucleotide)
ATGGCTAATGTGTCTTACCATATAGCACATCTTCTTGAGAAGATGACATCCAATGATAAA
GACTTCAGGTTTATGGCTACTAATGATTTGATGACAGAGTTGCAAAAAGACAGTATCAAG
CTCGACGATGATTCTGAAAGAGAAGTAGTAAAAATGCTTCTACGATTACTCGAAGACAAG
AATGGTGAAGTTCAGAATTTAGCTGTGAAATGCCTCGGTCCTCTTGTAAACAAAGTAAAG
GAGTATCAGGTGGAAGGTATAGTTGATACACTTTGTGCCAATATGCTTTCGGATACTGAG
CAGCTAAGGGACATCAGCAGCATTGGATTAAAGACTGTAATTTCTGAACTCCCACTGGGT
TCCAATACTCTTGCTGCTAATGTTTGTAAGAAAATAACTGGTAAATTGAGTAGTGCTATA
GAAAAGCAAGAAGATGTTTCAGTTCAACTTGAAGCACTTGATATTCTTGCTGATTTATTG
AGCAGATTTGGTGGTTTATTGATATCATTTCATCCTATGCTGCTCAATTCACTGTTGCCG
CAGCTTGCATCTCCCCGTCAGGCTGTTCGCAAGCGCACCATAGTTGCGTTGTCACATTTG
GTCATGTCTTGCAATGCTTCGCTTTATAACAAGTTAATAGACCATCTACTGGAGGGTCTG
AGCTCTTCAACTTCATCAAGTGTCAGCCGAACACACATACAGTGCATTGCTTCTATATGT
CGTCAAGCTGGACACCGATTTGGTGAACAATTGTGGCGTGTGGCACCATCAGTTTTGGAA
TATTCAAAAGATACAGATGAAGAATTACGGGAACATTGCTTGCAGGCTCTTGAAGCATTT
GTCCTCAAGTGTCCTAAAGAAGTCCAACCACATATACCTACGATAATTGATCTATGCCTG
AAGATGATAACATATGATCCAAATTACAACTATGAGGATGAAGAGGGAGTGTGTGATGAT
GACGAAGAAATGGAAGATGACACATACTCACCTGATGCGGATCCTGAATCTGACTCAGAA
GAGTATTCGGATGATGATGACATGTCCTGGAAAGTGAGACGTGCTGCAGCTAAATGTCTT
GAATCTGTGATAGCTACGCGTCACGAGCTCTTAGCCGAGATGTACCATACAGTTTCGCCA
GCTTTGATTGCTAGATTTAAAGAACGCGAGGAAAATGTGAAGTGTGATATATTGAGCGCC
TACACAGCTTTACTGAGAGCAACTCGACCTCCACCAGCCTTACAAATCTCTGGGACCCCG
GCTGATAACTCACCACAGGCTTTACTAATTCAAACGGTGAGCAGCATAGTGCGGGGCGCT
CTGCGTGTGATACGCGGGCGCAGCGTGAGGGCGCGCGGCTGCGCACTGTCGCTGCTACGG
GAGCTGCTCGCTGCGGCGCCGGGCTGTCTGTCCGACCACGTGGCGCGGGTGGTGCGCGCT
CTCACACCGGCTCTCCTGGACAAGACCACAGCATCATCGATGAAGATCGAGACGTTAGTG
TTCATTGGTTGCCTGGTGCGCGGGCAGGGCGCCGGTATGCGAGAGCACGCGGCGGCGCTG
CTGCCGGCCGTGCTGGCAAGCGTGCACGACCCCTTCTACAAAGTTACTGCTGAGGCTCTT
AGGGTGCTTCAGCTTCTGGTCAAGATTATGCGGCCTCTGGTAATCAATGTATACCTGTAT
ACAAATAAACAATTTTCTGTGTTTTGTACAAAAGACAATATAGAAGGCGCCGATGGTGAA
GTAGAAGTTGCAGTTGAGCCTCCTCCGGAAGAGTTGAAACAGTTTATACCTGCAATGTAC
GAGTGCAATCTAGTGAGACTGCGGGCCACAGATATGGACCAGGAAGTAAAAGAACGAGCT
ATAGCTGCTTGCGGACAGCTCTTGTGTCATTTTGGAGATTATTTACAGAACGAGCTCCCT
GTGTGTCTTCCAATATTTTTAGAGCGACTTCGAAACGAAATAACTCGCCTCACTACCGTT
AAAGCTTTGACAAAAGTAGCATCGTCACCGTTGAGGATCGATCTCACTCCTATTTTGTCT
GATGCTGTACCTATTCTCGGGTCGTTCTTAAGAAAAAATCAAAGAGCATTGAAATTGTCA
ACACTGGTCCTTCTAGACACTCTGGTACAGAATTATAGTCATGCCATCAGCATTGAACTT
TTGAGCAAGGTGCTGATGGAGGTGCCGGCCTTGGTGTGCGAGCAGGACCTGCACTGCGCG
CAGACGGCTCTGGCGCTGGTGCGGTCCGCCTGCCTGCGCTGTCCCGCCGCCCTCACCGCG
GACGCGCGCTACGCCCTCACCCCCAAAATACTCGCGCTCGCCAAGTCGCCGCTACTCCAA
GGCGGCGCTCTCAAAGCAATGTTGGGCGTCCTGAGTGCTCTGGTGTCGGCCGACGTGGCG
GGCTGTTCGCGCCGCGAGCTGCTTGCCTTGTTGGTGATGCCCGTGCGTCGCTTGCAAGAG
CACAACGCTACCGCACACCATATCAAACAGGCGTTCCATTCATTGTCGAAATGCGTGGCG
GCCGTGGTGGTGGAGGGGGGGCCGGAAGCGGGCGAGGCGGTGCGAGGCTTCCTGCGCGAC
GCCGCACACCCGCCCTCCGACGCGCACCACATGTTCTCGCTGCTCGCCCTCGCTGAGATC
GGACGACATCTAGATCTGAGTTCGGTTCCGAATTTGAAGGAAGTACTGCTCAATTCTTTC
ACGCCGTCTTCGGAAGAAGTGAAGTCCGCTGCTAGTTACGCCCTCGGCTCCGTTGCAGTG
GGTAACCTTCCAGAATTCTTGCCCTTCATCCTGGGTGAGATCGAGGCTCAGCCCAAACGC
CAGTACCTCCTGCTTCATTCGCTAAGAGAGATCATCTCATCAGAGTCATGTACTCCGGAA
GGCGTGGAAGCTTTACGACCCTTTATACCACAGATTTGGGTACAATTATCTAAACATTGT
CAGTGTGCTGAAGAAGGATCTCGGAATGTAGTAGCCGAATGCTTGGGTAAATTGTGTCTC
CTTGAACCAGAGGAATTGTTGCCACATCTAAAAGAATTCTTGAAGTCACCGGAGCCTTTG
ACTAGAACAACGGCCGTTACTGCTGTTAAGTTTACTATATCTGATCAGCCGCAAGCCATA
GACGGGTTGCTGCGCGGCTGCATGTGCGAGCTGCTGGTGCCGCTGCGGGACGCGGAGCTG
GGCGTTCGGCGCGTGGCGCTCGTCGCCTTCAACTCGGCCGCGCACAACAAGCCCTCGCTC
GTCCGCGACCTGCTGCCGCAAGTGCTGCCCACCATCTACGCTGAAACCAAAGTCAAGAAA
GAACTGATTCGTGAAGTGGAGATGGGTCCGTTCAAGCACTCGGTGGACGACGGTCTCGAT
CTTCGTAAGGCGGCCTTCGAGTGCATGTACACGTTGCTGGGCACGTGCCTGGACCGCCTC
GACGTGTTCGAGTTCCTGCGCCACGTGGAGGACGGGCTCCGCGACCACTACGACATCAAG
ATGCTGACGTACCTCATGTGTGCTCGCCTGGCGCAGCTGTGTCCGGCCGTCGTGCTGCAG
AGGTTAGAAAGTCTAGTGGAGCCGTTGAGAGCGACGTGTACAATGAAAGTCAAAGCTAAT
TCCGTGAAACAAGAATATGAGAAACAAGATGAATTGAAACGGTCCGCCCTCCGCGCTACC
GCTGCCTTGATGCAGATTCCAGAAGCAGATAAAAATCCTCATCTTATGGACTTCGTGACT
CAAATTCGATCACTGCCCGAGCTTCAGCCGATCTTCGAGTCTATCCTGAAGGATTCGAGC
GGGGCGGCCGGCCTGGACTCGAACCTCATGGACCAAAGCTAG
(3822 bp)

- SilkBase 1999-2023 -