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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA002632-TA
JBrowseBomo_Chr5
chromosome_No.
Scaffold_id
Scaffold Length		chromo5
Bm_scaf20
5834375 bp
UniRef
UniRef50_Q4QQE8 (38%/556)
Cluster: Endonuclease-reverse transcriptase; n=43; Eumetazoa|Rep: Endonuclease-reverse transcriptase - Schistosoma mansoni (Blood fluke)
Ontology
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006400 P tRNA modification
Orthologue
Sequence
(Amino Acid)
MQEYNIHILGLSETRWNGFGETQCDFGYSLLYSGKEEDATREYGVGLLLSRSAKSSLLSW
KPVSERIICARYGHDSTRVRKVTVIQCYAPTNSASTDVKSQFYEQLGHTLKGIKKQDIVI
LMGDINAKMGNDNVDREYYMGQYGATGTINENGELFGDLCSTHGLVIGGTLFKHKECHKV
TWISPDGKTKNQIDHVAISKTWRSSLLDVRNKRGADIDSDHHLVVAEVRLKIAVPHRKPD
KAARKFYIRKLEDSNCREKFSLSLKNSFELLKEIEDEQMDETWDRIRGAIIKLLRKYWGI
PIQSKNLGYAMLRREYSSMRLVIRKLARRDQRNAIDELADRAKLAAKRQDMKELYDVTKR
IINKKHHPRKKPLKDCSGQLLCTTEEQLVRWTEHFTKLLSKCQSQPTDGISVPDLPLDIP
IAPPTFNEIVKAIKQLKPGKAPGIDNINAEMLKADAPRSASLLYPLIVRIWETEQIPSQW
KQGLLVKVPKKGDLSSCDNWRGITLLPCAAKVLARLLLNRMSKKITGLFGRSKQGCSVVH
LTAEVLAKVFPDTQLLWLPLSNSVQLENGVKAQGEGVAKFAGLPKHVICATLYNINEIVP
PGHFELGKLPLWTKNGKKMITADKYMDLMETFKPDIILAASDGRISLNEKPKRIVKSVER
TMALLDSCINKYKASEELQQSSLVGVIVAANIPHKCEECIRHILKYKETLVGVALAGLTD
GSKESYEVSLDKLKEIFSRVGGSLPNDLLRIVEGSWNPAVIVTAIEHGWDVFDGSYPIKL
TNKGHALSLNFDVYRYSGDPCIMDLNDIRYNEDFKPILEGCECLTCKKHTRAYIRHLLNT
REMLASVLLSIHNLHHFNEFFVQARLHISASTFNIYKKHIITQYENINPKLDNEEDKTAP
TLVQDKKKIKVRIGDNVKTEVNGTIIK
(927 a.a.)
Sequence
(Nucleotide)
ATGCAAGAATACAACATTCACATTCTTGGATTGAGTGAGACGAGATGGAACGGTTTTGGA
GAAACGCAATGTGATTTTGGATACTCGTTATTGTACAGTGGTAAGGAAGAGGATGCGACC
CGAGAGTATGGCGTGGGTTTGCTGCTAAGTCGCAGCGCTAAAAGTAGCTTACTCTCTTGG
AAGCCAGTCTCGGAACGAATAATATGCGCCAGATACGGTCACGACTCGACACGAGTACGG
AAGGTGACAGTGATACAATGCTACGCTCCCACTAACTCTGCTTCGACCGATGTAAAGTCA
CAATTCTACGAACAGCTGGGGCATACACTCAAAGGCATCAAGAAACAAGATATCGTGATT
CTCATGGGCGACATAAATGCGAAGATGGGAAATGACAATGTAGACCGCGAATATTACATG
GGACAATATGGGGCAACCGGAACTATTAACGAAAACGGAGAACTTTTCGGTGATCTATGT
TCCACACATGGTCTAGTTATTGGAGGTACCCTATTTAAGCATAAGGAATGTCATAAAGTT
ACTTGGATATCACCGGACGGAAAGACAAAGAACCAAATCGATCACGTAGCTATCAGTAAG
ACATGGCGCTCTTCTCTTCTTGATGTGCGAAATAAGCGCGGCGCAGACATTGACAGTGAT
CACCATCTGGTGGTAGCAGAAGTTCGTCTTAAAATAGCAGTTCCCCACAGAAAGCCAGAT
AAAGCAGCTAGAAAATTTTATATCCGAAAACTGGAAGATAGCAATTGCCGAGAGAAGTTC
AGCTTATCTCTCAAAAATAGTTTCGAGCTGCTTAAGGAAATAGAGGATGAGCAGATGGAC
GAGACGTGGGACCGCATACGTGGTGCTATAATAAAGCTGCTAAGGAAGTATTGGGGTATA
CCAATACAAAGCAAGAACCTTGGATATGCTATGTTGCGTCGGGAATACTCATCCATGCGA
TTAGTAATTAGAAAGCTGGCTAGGAGAGATCAGCGAAATGCAATCGATGAGCTAGCAGAC
CGAGCAAAATTGGCAGCCAAGAGGCAAGATATGAAAGAGCTTTACGATGTCACCAAGCGG
ATAATAAACAAAAAACATCATCCACGGAAAAAACCACTGAAAGACTGCTCGGGTCAGCTA
CTATGTACCACGGAAGAGCAGCTCGTGCGCTGGACGGAACACTTTACTAAGTTGCTGTCC
AAATGTCAGTCCCAACCGACAGACGGAATATCAGTACCCGACTTGCCTTTGGATATACCT
ATTGCACCGCCCACCTTTAATGAAATAGTAAAGGCAATTAAACAGCTGAAACCAGGTAAG
GCCCCCGGTATTGACAATATCAATGCCGAAATGCTGAAGGCTGATGCACCGAGATCTGCA
AGCTTGCTATATCCGCTCATCGTAAGGATTTGGGAGACTGAGCAAATACCGTCTCAATGG
AAGCAGGGACTACTCGTGAAAGTTCCGAAGAAGGGCGATTTGTCTTCTTGTGACAACTGG
AGAGGCATTACACTTCTTCCTTGCGCAGCAAAGGTCTTGGCTAGATTACTTCTAAACCGG
ATGTCCAAAAAGATCACTGGACTCTTCGGGAGGAGCAAGCAGGGGTGCAGTGTAGTTCAT
CTGACAGCTGAAGTGTTAGCTAAAGTATTCCCTGATACACAATTACTATGGCTCCCACTA
TCCAACTCAGTTCAATTAGAAAATGGAGTAAAAGCCCAAGGAGAAGGTGTTGCAAAGTTT
GCTGGATTACCGAAACATGTAATATGTGCGACTTTATATAACATAAATGAAATAGTTCCA
CCTGGGCATTTTGAACTAGGCAAATTGCCACTTTGGACTAAGAATGGAAAGAAAATGATA
ACTGCAGATAAATATATGGATTTAATGGAGACATTTAAACCTGATATAATTTTAGCTGCT
TCAGATGGACGTATCTCTCTAAATGAAAAACCAAAAAGAATTGTCAAGTCTGTAGAGAGG
ACAATGGCTTTGCTTGATTCATGCATAAATAAATATAAAGCTTCTGAAGAACTTCAACAA
AGCTCACTTGTAGGTGTGATAGTTGCTGCGAACATACCACATAAATGTGAGGAATGCATC
CGACATATCCTGAAATACAAAGAAACATTAGTTGGAGTTGCATTAGCTGGTCTTACTGAT
GGAAGCAAGGAGTCATATGAAGTTTCTCTTGATAAGCTGAAAGAAATATTCAGTAGAGTT
GGTGGCTCACTACCAAATGATCTACTTCGTATTGTTGAAGGTTCTTGGAATCCTGCAGTC
ATAGTAACAGCAATAGAGCATGGTTGGGATGTGTTTGATGGTTCATATCCAATAAAACTC
ACAAATAAGGGACATGCATTGTCTTTAAATTTTGATGTGTATCGATATAGTGGAGATCCA
TGTATCATGGACCTTAATGACATTAGGTATAATGAAGATTTCAAACCTATACTGGAAGGA
TGCGAATGTTTGACATGTAAAAAACACACACGTGCATATATTAGGCATCTTTTAAATACA
AGAGAGATGCTGGCATCTGTTTTGTTGAGCATACACAATCTACATCATTTCAATGAATTC
TTCGTGCAAGCTCGTCTACACATCAGCGCCTCTACGTTCAATATTTACAAGAAACACATT
ATAACACAATATGAAAATATAAATCCGAAATTGGATAATGAAGAAGACAAGACAGCTCCA
ACTCTTGTGCAGGATAAAAAGAAAATTAAAGTGAGAATTGGTGATAATGTCAAGACTGAA
GTTAATGGTACAATTATAAAGTAG
(2784 bp)

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