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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA002250-TA
JBrowseBomo_Chr26
chromosome_No.
Scaffold_id
Scaffold Length		chromo26
Bm_scaf34
4438494 bp
UniRef
UniRef50_A5A9V2 (23%/469)
Cluster: Huntingtin like protein; n=2; Ciona intestinalis|Rep: Huntingtin like protein - Ciona intestinalis (Transparent sea squirt)
Ontology
GO:0005488 F binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
Orthologue
Sequence
(Amino Acid)
MNVLEKAEKALEYLKANEGSAKVHELQTAAGTLGRCLGALGTRSNCARHYANLLHSAIPT
LLFLASHDSAEVRLVGDEALNRAVVGGFAFHSHKTNIILQNQIDHKRNARWIRAALSRIC
LGECWLRPGVGKIRNQAQFLFPKLSQIVKETNEIQLIVEALESNLPRLLNALGEYTSDEE
ISELSKAILLHVETTEASVRRGIATCIAHMCSHREALLTNVLQKVFEKLWPISRESPVVL
GWFSVIKVVFQINEFKKFAESDLFNVHDYMELYNLCVNYVDQSTDHNIQNCVMECLTVIL
SKAAGAYRAAVLEKHPARVVLEERNLNKGHRRNISSSSVISSRYAPSPASEQRDNLELSF
TGALQLGSLLQLNTPSLSVEDLTIQTPESPASEGEAPPPDSELLSRDLSEKLKEFEETDS
TDTDLEKCSHDAGFKINIGSVADDDVPLKYCVRLLASKFLLAGNKGDLIPDRSVRVSLKA
SALNCISEVVQVYPQAMTLYLDKDADAKIHNISGSSEGTDSNQDNINEYILERNVCYQDS
LTDSLSQELNRSIEGHSICKKDIKSLEKSTDSGEKSSKDAPSIDSKHKTDLMGSAMTDST
NPNMTISNFTTNSNMTTSNDQTSGYPMSSSGDVLSSSIDLDMKFDHFGESTTNLDNLKDL
ERKTDRTKRALKRTDEVQSADVEGLVDSKDEKDFEFQHLSDVFLLLEGHCDPQIRGLVRV
CIGNYLAAALNASHGDYNRWRNFNSLPKAVGDCMSAGDLVQIILKGLRDEIHSTVNHSLS
ALTGLAVALSASSDWSLLVDALTSLVHVEANTYWLCRVNLCKLYERIPYKR
(831 a.a.)
Sequence
(Nucleotide)
ATGAACGTCTTAGAGAAAGCTGAAAAAGCTTTAGAATATCTTAAAGCAAACGAAGGTTCT
GCGAAAGTTCATGAGCTCCAAACGGCTGCTGGAACTCTGGGCAGATGCCTGGGAGCTTTA
GGAACTCGCTCGAATTGCGCTCGGCATTATGCAAATTTGTTACACTCAGCAATTCCAACT
TTATTGTTTTTAGCCAGCCATGACAGCGCTGAGGTGCGTTTGGTTGGCGATGAAGCTCTC
AATAGAGCCGTAGTCGGAGGTTTCGCATTCCATTCACACAAAACTAATATTATACTTCAA
AATCAGATTGATCACAAAAGGAATGCCAGATGGATCCGTGCAGCTTTATCTCGTATTTGC
CTTGGAGAATGTTGGCTCCGTCCTGGTGTTGGCAAGATTCGAAATCAAGCCCAGTTCCTA
TTTCCAAAATTAAGTCAGATAGTGAAAGAGACAAATGAAATTCAACTCATTGTGGAAGCA
TTAGAGAGTAACCTGCCTCGGCTCCTAAATGCCTTGGGTGAATATACTTCAGATGAAGAG
ATTTCAGAACTGTCAAAAGCAATTCTATTGCACGTAGAAACGACTGAAGCATCTGTGAGG
AGAGGCATAGCGACATGCATAGCGCACATGTGCTCACACAGAGAAGCCTTGCTTACTAAT
GTCCTACAGAAAGTGTTTGAAAAACTGTGGCCCATCTCTCGCGAGAGTCCAGTGGTTTTG
GGCTGGTTTAGCGTCATCAAAGTCGTTTTTCAGATAAACGAATTCAAGAAATTTGCCGAA
AGCGATCTTTTCAACGTGCATGATTACATGGAGCTGTACAATCTATGCGTGAACTACGTA
GATCAGTCGACGGACCACAACATCCAGAACTGCGTGATGGAATGCCTTACCGTAATACTG
TCCAAAGCGGCCGGAGCGTACAGGGCGGCCGTGCTGGAGAAACACCCGGCTCGGGTTGTA
TTGGAGGAGAGGAATTTAAATAAAGGACACAGGAGGAATATTAGTTCGTCGAGTGTCATA
TCCTCAAGGTACGCGCCGAGTCCGGCCTCCGAGCAGAGAGATAATCTAGAGCTTTCGTTT
ACTGGAGCTTTGCAACTTGGAAGTCTATTGCAGTTGAACACGCCGAGCTTGAGCGTCGAA
GATCTGACCATACAGACTCCGGAGTCGCCGGCGAGCGAGGGGGAGGCACCGCCGCCCGAC
TCGGAGCTCCTCTCCAGAGACTTGTCGGAGAAACTTAAGGAGTTCGAAGAAACCGACAGC
ACCGATACTGACCTGGAGAAATGTTCCCACGACGCCGGGTTCAAGATAAACATAGGATCT
GTAGCCGATGATGATGTCCCGCTAAAGTATTGTGTGAGGTTGCTGGCTTCGAAGTTTTTG
TTGGCTGGCAACAAAGGAGACCTCATTCCTGATCGGTCTGTGCGGGTCTCGTTGAAGGCG
TCCGCGCTTAACTGCATATCGGAAGTAGTGCAGGTGTACCCTCAAGCGATGACCTTGTAT
TTGGACAAAGATGCTGACGCGAAAATCCATAATATTTCCGGGTCATCAGAGGGCACAGAC
TCGAACCAAGATAACATTAATGAGTACATATTAGAGAGAAACGTCTGTTACCAGGATTCC
CTAACAGATTCCTTAAGCCAAGAGCTGAATAGGAGCATCGAAGGTCACTCGATTTGCAAA
AAAGACATAAAGTCCCTCGAAAAAAGCACAGATAGCGGCGAGAAAAGCTCCAAGGACGCA
CCCAGCATCGACAGTAAGCACAAAACGGACTTAATGGGAAGCGCCATGACCGATAGCACG
AATCCCAACATGACCATTAGTAACTTCACCACAAACTCCAACATGACCACGAGTAACGAC
CAGACCAGCGGATACCCCATGTCCAGCAGTGGGGACGTACTGTCCTCGAGCATCGATTTG
GACATGAAATTCGATCATTTCGGAGAATCGACAACCAATCTGGACAATCTCAAGGATTTG
GAACGCAAAACTGACAGGACGAAAAGAGCCTTGAAAAGGACCGATGAAGTACAAAGCGCT
GATGTGGAGGGCTTGGTCGACAGCAAAGACGAGAAAGACTTTGAGTTTCAGCATCTATCC
GATGTTTTTCTGCTGCTGGAAGGTCACTGCGACCCGCAGATCAGGGGTCTGGTCAGGGTC
TGCATTGGGAACTACTTGGCGGCCGCTCTGAATGCCTCCCACGGCGATTATAATAGATGG
AGAAACTTTAACTCGTTGCCTAAAGCCGTCGGAGACTGCATGAGCGCTGGGGACCTGGTA
CAGATCATATTGAAGGGTCTAAGGGATGAAATACATTCAACAGTGAACCACAGCTTGTCA
GCACTGACCGGCCTGGCCGTGGCCCTGTCGGCCAGCTCAGACTGGTCCCTGCTCGTGGAT
GCGTTGACCTCGTTAGTGCACGTGGAGGCCAACACGTATTGGCTGTGCAGGGTCAATCTC
TGTAAGCTCTACGAAAGGATACCGTATAAGAGGTAA
(2496 bp)

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