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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA002236-TA
JBrowseBomo_Chr26
chromosome_No.
Scaffold_id
Scaffold Length		chromo26
Bm_scaf34
4438494 bp
UniRef
UniRef50_Q86NP2 (61%/286)
Cluster: Negative elongation factor A homolog; n=3; Eumetazoa|Rep: Negative elongation factor A homolog - Drosophila melanogaster (Fruit fly)
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
Orthologue
Sequence
(Amino Acid)
MANVRDSDISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSF
FHIPRRNVEEWKSELEEILEVAAMDSDLWVAMLAEVLKTYPSAGTLNTEIAEFDETRPIF
SDMIGELRRALAKHSDLGLLPLECLYLNKNALVSVVGQQTNPIKHFTLKRKPKSASLRSE
LLAKATEVQANQKKAQAPTVPIRSRGMPRKMTDTTPLKGLPSLGAGRAAMRAGGTGWRSQ
RPGIKLLDIADQPATHAQIKKRRKLEMEEGAKKAAAAAPPSPPPPAGDKTQNNKTEEPPT
SVPSSEPTPAASPPPAGPVAAPPAPARAASPDPRPALLHDGPPPLASPILVQGPSGGKLV
LASGGKPVLVPALLNSSAVLLQPGGKAVLLHNIKQVTQPVVQQQQRTTVPVPALHQTQTL
HHQIPQTVQIQQQVQQPTPVQPAPQPAATPLLPRRGLSLTREQMLEAQDMFRNANRVTRP
EKALILGFMAGSRDNPCPNLGNIVTIKLSENIENVLQSDDTYLTMLSEMHFQMNYNNGQW
TRLKKYRPIDGMVPQKIPPGSTVISAGNQQPVVSIANQTIS
(581 a.a.)
Sequence
(Nucleotide)
ATGGCGAACGTGCGGGATAGTGACATATCTTTGTGGCTCCACAATAAACTCGGTACATCG
AACGATTCTTGGACAAGTGGCTCGATTTGTTCACAATTAAACGCTGAAGTATTAAAGAAT
ATAAAAGACTGTTTTCCAGAATTACAACCGCAAGTGAAATTGAAATTATTACTAAGTTTC
TTTCATATCCCGCGCAGAAATGTTGAAGAGTGGAAAAGTGAACTCGAGGAGATCCTTGAA
GTTGCTGCAATGGATTCAGACCTCTGGGTGGCGATGCTTGCTGAAGTCCTCAAAACGTAC
CCCTCAGCTGGCACCCTTAATACAGAGATAGCAGAGTTTGATGAGACAAGACCAATATTT
AGTGATATGATTGGAGAGTTAAGGAGAGCTTTAGCCAAACATTCGGATCTAGGATTATTA
CCGCTGGAGTGCCTGTATTTAAATAAGAATGCTTTAGTATCTGTGGTTGGCCAACAAACA
AATCCGATAAAACATTTTACACTGAAACGGAAACCTAAATCGGCATCGCTCAGAAGCGAG
CTCCTTGCCAAAGCTACAGAGGTTCAGGCAAATCAGAAGAAAGCTCAAGCTCCTACCGTA
CCAATACGTAGCAGAGGAATGCCTCGGAAAATGACAGATACTACTCCCCTGAAGGGTTTG
CCGTCGTTGGGCGCGGGTCGTGCGGCCATGCGCGCGGGCGGCACGGGCTGGCGCTCGCAG
CGTCCCGGCATCAAACTCCTCGACATCGCCGACCAGCCTGCCACGCATGCGCAGATCAAG
AAACGAAGAAAACTCGAAATGGAGGAGGGCGCAAAGAAGGCTGCCGCCGCTGCCCCGCCC
TCTCCCCCTCCGCCGGCCGGTGATAAGACACAAAACAACAAAACAGAAGAACCTCCCACA
AGCGTCCCCAGCTCGGAGCCGACGCCCGCGGCGTCCCCCCCTCCCGCCGGGCCGGTCGCC
GCGCCCCCCGCGCCCGCCCGCGCCGCGTCCCCCGACCCGCGCCCCGCACTCCTGCACGAC
GGACCCCCGCCTCTCGCCAGCCCCATACTCGTACAGGGTCCTTCTGGTGGCAAGTTGGTG
CTAGCAAGCGGTGGGAAGCCGGTTCTGGTGCCGGCACTGCTTAACTCCTCAGCCGTGTTA
CTGCAGCCTGGTGGAAAAGCTGTGTTACTGCATAATATTAAACAGGTCACCCAGCCCGTG
GTCCAGCAACAACAGCGGACAACTGTTCCCGTACCAGCCTTACATCAGACGCAGACTTTA
CATCATCAAATACCACAGACGGTGCAGATTCAACAGCAAGTACAGCAGCCCACTCCCGTG
CAGCCGGCGCCCCAACCAGCCGCCACGCCTCTACTGCCCAGACGAGGACTTTCCCTTACG
CGAGAACAGATGCTGGAAGCCCAGGATATGTTCAGAAATGCAAATCGTGTTACGAGACCG
GAAAAAGCTCTTATACTTGGTTTTATGGCTGGATCTAGAGATAATCCGTGTCCGAACCTC
GGCAATATTGTTACGATAAAACTCTCTGAAAACATTGAGAATGTTCTACAGTCGGACGAC
ACGTATCTCACTATGCTCTCAGAGATGCATTTCCAAATGAACTACAACAATGGACAGTGG
ACTAGACTCAAGAAGTACCGACCTATAGACGGCATGGTGCCGCAGAAGATACCTCCAGGA
TCCACTGTGATATCAGCCGGGAATCAGCAACCTGTAGTTTCAATAGCCAACCAAACGATT
AGCTAA
(1746 bp)

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