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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA002114-TA
JBrowseBomo_Chr1
chromosome_No.
Scaffold_id
Scaffold Length		chromo1
Bm_scaf23
5097954 bp
UniRef
UniRef50_UPI00015B51E9 (48%/1573)
Cluster: PREDICTED: similar to laminin gamma 1 chain; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to laminin gamma 1 chain - Nasonia vitripennis
Ontology
GO:0005515 F protein binding
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
Orthologue
Sequence
(Amino Acid)
MEATNTCGDNGVKLYCIQTSAGTSTRSCDYCQPGQFSSYYLTDLHHEQDNQTWWQSETMK
EGIQYPNQVNLTLHLGKAYDITYVRIVFYSPRPQSFAIYKKTNEDKVWEPFQYFSASCRE
TYGVEEQKSAELGAETRALCTSEYSDISPLSGGNVPFSTLEGRPSAYTFDSSPELQDWVT
ATDLRISLDRLNTFGDEIFGDVQVLQSYWYAIADVAVGARCKCNGHASVCDSQQQPDGTK
TRSCRCEHNTAGRECERCLDFYNDAPWGRASSTNVHECKACNCNGFSNKCYFDKELYERT
GHGGHCLECSDNRDGPNCERCRENFYQSPEDICLPCNCNPTGSRSLQCNAEGKCQCKPGV
TGDKCDACAPNHYEFTNQGCKPCGCNESGSYGNTPQCDPQTGVCLCKQNVEGRRCRECKP
GFFNLDLQNEFGCTPCFCFGHSSQCSSAPKYQVHDISAHFIRDSEKWDAVDETGKPAQLQ
FNANTQNIAVVSKNTEIVYFLAPNQFLGDQRPSYNHDMKFSLKLGEHSGYPSAQDIILEG
ARTSISMNIYGQNNPEPTDQPQEYTFRLQEDPRYGWSPTLSNYEFMSILQNLTAIKIRGT
YNKGGVGYLINFKLETAKIGREKGAAPANWVEKCSCPKAYVGDYCEECAPGFKHEPANGG
PYSTCIPCDCNGHAHICDTATGFCICKHNTTGSNCELCAKGFYGNAIAGTPDDCKPCPCP
KDSGCIQLMDQSIVCTDCPDGYAGPRCEVCADGHFGDPNGQFGPQKQCEECQCNGNVDLN
AVGNCNRTTGECLKCIYNTAGQHCDKCLSGYYGDALDPKQKGDCQPCECHEGGTVESPEG
PPLCDGLTGYCTCRPHVIGKNCDKCEDGYYNIFSGDGCKPCDCNLEGSYNSTCHPRTGQC
YCKPGIDGKHCDRCRDYHYGFSVEGCKGCDCDEWGSTNYQCDVSGQCTCQENVEGRRCDR
CMENKKRRLDGQGCEDCPPCYNLVLDAVNQHRRELQELDEILAKISKAPTVVENADFDNE
LQRVRAEIESLSQEAQIGLGNTGGSSLTDNLAELADRLADIRNMLFKIEDESFDGNEAVE
KSKGNVSKAEGTIEAAQKEINSALEYLDGEGAAALAKARNRSDQFGKQSVDMSALAKESR
LLAEKLENEARNIRDIADKAFNSSLVANKIAKDGINKQANISNEVQILTNELNAASGKLN
SMTELADQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDR
LIAENEDTLHNLEDGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTA
ANEIYKTLKEFSDQVTESHKQAIQATMDVPAVQEKVAAAEESINSITEELVAASDKAKEA
RDLAQQAQKEYADKASEAAHEIKKKASAAKAKAVNLRDESDKLITRVRGTEKQIEELEKK
AADNMQLTRDAKMKVGQANIDAREAEKQVTKGLEDLKVIMDELQNLPTLDDEALDRLKES
LDSAEKALRGVDLDGKIKTLTEAKNNHQRWMKEYQDEHDLLRSEVENVKGILEQLPDGCF
KRIVLEPTEGPSRSANYR
(1578 a.a.)
Sequence
(Nucleotide)
ATGGAGGCGACCAACACCTGTGGAGACAACGGAGTAAAGTTATACTGCATACAGACATCC
GCTGGGACGTCTACAAGGTCCTGTGACTACTGTCAACCAGGACAGTTCTCCAGCTATTAC
TTAACCGACCTTCATCACGAGCAGGACAACCAGACTTGGTGGCAGTCGGAGACAATGAAG
GAAGGCATCCAGTACCCCAATCAAGTGAATTTGACCTTACATTTGGGCAAAGCGTATGAT
ATTACGTATGTCCGGATAGTGTTTTATTCGCCTCGACCTCAAAGTTTTGCAATTTACAAG
AAGACAAACGAAGACAAAGTTTGGGAGCCATTCCAATATTTCAGTGCCTCATGTCGAGAA
ACTTACGGAGTTGAAGAGCAGAAAAGTGCTGAATTAGGTGCGGAGACTAGGGCTCTCTGC
ACCAGCGAATATTCAGATATATCTCCGTTATCCGGAGGCAACGTGCCGTTCTCGACGCTG
GAGGGACGACCTTCGGCATATACGTTCGACAGCAGTCCCGAATTACAGGACTGGGTGACG
GCTACCGACCTGCGTATCTCCCTCGACCGCCTCAATACCTTCGGTGACGAGATCTTCGGG
GACGTCCAGGTCCTACAATCGTATTGGTACGCTATTGCTGATGTGGCTGTGGGCGCCAGG
TGCAAATGCAACGGCCACGCATCAGTGTGCGATTCTCAACAGCAGCCTGACGGAACAAAG
ACCAGATCGTGCCGATGCGAACATAACACTGCTGGACGCGAATGTGAACGTTGCTTAGAT
TTCTATAATGACGCGCCGTGGGGACGTGCTTCATCTACCAACGTGCATGAGTGCAAGGCG
TGCAACTGCAACGGTTTCTCGAACAAATGCTACTTCGACAAAGAGTTGTACGAAAGGACC
GGACACGGAGGGCACTGTCTCGAGTGCAGTGACAACCGAGACGGCCCCAACTGTGAGCGG
TGCAGGGAGAACTTCTACCAGAGTCCCGAAGACATCTGTTTGCCTTGCAACTGTAACCCT
ACCGGTTCTCGAAGCCTTCAATGCAATGCAGAAGGCAAGTGCCAATGCAAGCCCGGAGTG
ACAGGGGACAAGTGTGACGCCTGTGCGCCGAACCATTACGAGTTTACGAACCAAGGATGC
AAGCCTTGCGGCTGTAACGAGTCCGGGTCGTACGGCAACACCCCTCAGTGCGACCCGCAG
ACCGGTGTCTGTCTGTGCAAACAGAACGTCGAGGGCAGACGCTGTCGGGAGTGCAAGCCC
GGCTTCTTCAATCTAGATTTACAGAACGAGTTTGGATGCACACCCTGCTTCTGCTTCGGC
CATTCGTCCCAGTGCAGCTCCGCTCCGAAATACCAGGTTCACGACATCAGCGCTCATTTC
ATTCGAGACTCGGAGAAGTGGGATGCTGTTGATGAAACAGGCAAACCGGCACAATTGCAG
TTTAATGCTAATACGCAGAATATAGCGGTCGTGTCAAAGAATACTGAGATCGTTTATTTC
CTTGCGCCGAATCAATTCCTTGGCGATCAGCGGCCATCGTACAACCACGATATGAAATTT
TCGCTGAAATTAGGCGAACATAGTGGCTATCCATCTGCTCAGGACATTATCCTCGAGGGC
GCCCGGACTTCTATTTCAATGAACATTTACGGACAGAACAATCCAGAACCCACTGATCAA
CCTCAAGAGTATACGTTCAGACTGCAGGAAGACCCTCGCTACGGCTGGTCTCCGACGCTT
TCGAACTATGAGTTCATGTCGATCCTTCAGAATTTGACGGCAATCAAAATCAGGGGAACA
TACAACAAAGGCGGTGTCGGGTACCTGATCAACTTCAAGTTGGAAACGGCCAAGATTGGC
AGAGAGAAAGGGGCGGCTCCAGCTAACTGGGTGGAGAAATGCTCGTGTCCCAAAGCCTAT
GTTGGGGACTACTGTGAAGAGTGCGCACCAGGGTTCAAGCACGAGCCTGCCAACGGCGGA
CCGTACTCGACTTGCATACCTTGCGATTGTAACGGACATGCCCATATTTGTGACACCGCG
ACTGGATTCTGTATCTGTAAGCACAATACGACCGGTAGCAACTGTGAGCTCTGCGCGAAA
GGTTTCTACGGGAATGCTATCGCTGGAACTCCAGACGACTGTAAGCCTTGTCCCTGTCCG
AAGGACAGTGGTTGCATCCAACTCATGGACCAGAGCATCGTGTGTACTGACTGTCCCGAC
GGTTACGCTGGACCGAGGTGCGAGGTTTGCGCCGACGGGCACTTCGGCGATCCTAACGGG
CAGTTCGGGCCTCAGAAGCAATGCGAGGAATGTCAGTGTAACGGGAACGTCGACCTCAAT
GCTGTCGGCAACTGCAACCGAACCACCGGGGAGTGTCTCAAGTGCATCTACAACACGGCC
GGGCAGCACTGCGACAAATGCCTCAGTGGTTACTACGGTGACGCATTGGATCCTAAACAG
AAGGGTGATTGCCAGCCCTGCGAGTGTCACGAAGGCGGGACGGTAGAGAGTCCCGAGGGA
CCTCCTCTATGTGACGGACTTACAGGATACTGCACCTGCCGACCTCACGTTATCGGCAAA
AACTGCGATAAGTGTGAAGACGGCTACTATAACATCTTCTCCGGCGATGGCTGCAAGCCC
TGCGACTGCAATCTCGAGGGTTCGTACAACAGCACCTGCCATCCGCGCACGGGGCAGTGC
TACTGCAAACCAGGAATCGATGGGAAGCACTGCGATCGCTGCCGAGACTACCACTACGGT
TTCTCAGTGGAGGGATGCAAGGGTTGCGACTGTGATGAGTGGGGTTCCACCAACTACCAG
TGCGACGTCTCCGGGCAGTGTACCTGCCAGGAAAACGTTGAAGGACGCCGCTGTGACAGA
TGTATGGAGAACAAAAAGCGTCGTCTCGATGGCCAGGGTTGTGAGGACTGTCCCCCTTGC
TACAATTTGGTTCTCGATGCGGTCAATCAGCACAGACGTGAGCTGCAAGAGCTTGATGAG
ATTTTGGCTAAAATATCGAAGGCTCCAACGGTGGTGGAAAACGCTGACTTCGATAATGAA
CTGCAGCGTGTCAGAGCCGAGATAGAGAGCTTATCTCAGGAAGCACAAATAGGCCTTGGC
AACACAGGGGGCTCCAGCCTCACCGACAATTTGGCTGAACTGGCTGACAGACTTGCTGAC
ATTAGAAATATGCTCTTCAAAATCGAGGACGAGAGCTTTGACGGCAACGAAGCTGTTGAG
AAGAGCAAGGGAAATGTCTCCAAAGCCGAGGGCACCATAGAGGCCGCCCAGAAGGAAATC
AACAGCGCTCTGGAGTACTTGGACGGGGAAGGAGCAGCAGCGTTAGCGAAAGCGCGCAAC
AGATCAGACCAGTTTGGCAAGCAGTCCGTGGACATGTCAGCGCTCGCCAAAGAATCCAGG
CTTCTCGCTGAGAAGTTAGAGAACGAAGCAAGGAACATCAGAGATATAGCGGACAAGGCC
TTCAACTCTTCGCTTGTCGCAAACAAGATCGCCAAAGATGGCATCAATAAACAAGCCAAT
ATTAGTAACGAGGTTCAGATCCTAACGAACGAACTGAATGCGGCTTCGGGAAAACTGAAC
AGTATGACAGAGCTTGCCGATCAAGCTTTAAAGAGAGCCAGAGCTGTGTATGACGAAGCT
TTAGGTCTGTACGCGGAGGTCAACACCACGCTGCTGCCCGACATCAAGCTCAACAAGCTT
CACGAAGATTCAATGGAGATGAATAGAACGATTGATGAGAAATCAGCAGAGCTGGACCGT
TTGATAGCTGAGAACGAAGACACCCTTCACAATTTAGAGGATGGCATAAGGCGCGGTCGG
GACTTGCTGGAACAAGGTCACGACAGGCAGGAGGAACTCAACGATCTCCTCGCTAAGCTG
GATGAGCTGCAGGCGCAAGCTAAAAACGATGTGGAACTCACGAAAGCCACGTTGACAGCC
GCAAATGAGATTTACAAGACTTTAAAAGAGTTCAGTGATCAAGTGACCGAGTCGCACAAG
CAAGCGATCCAAGCCACGATGGACGTGCCGGCCGTCCAAGAGAAGGTAGCGGCGGCCGAG
GAGAGCATCAACAGCATCACCGAGGAGTTGGTCGCCGCCAGTGACAAGGCGAAGGAGGCC
AGGGACTTGGCCCAGCAGGCGCAAAAGGAATATGCCGACAAAGCTTCTGAGGCCGCCCAC
GAAATCAAGAAGAAAGCGTCCGCTGCCAAAGCAAAAGCTGTGAACTTGAGAGACGAGTCA
GACAAACTGATTACTCGTGTGCGAGGTACGGAGAAACAGATCGAGGAGTTGGAGAAAAAA
GCAGCCGACAACATGCAGTTAACGCGTGACGCAAAAATGAAGGTTGGTCAGGCGAATATC
GACGCTCGGGAAGCTGAGAAACAAGTCACCAAAGGTCTTGAGGATCTGAAAGTCATTATG
GATGAGCTGCAGAATCTCCCAACGCTCGACGATGAAGCATTGGACAGATTAAAGGAAAGC
TTGGACAGTGCCGAAAAAGCATTGAGAGGTGTAGATCTTGATGGGAAAATAAAAACATTG
ACAGAAGCCAAGAATAATCATCAGAGATGGATGAAAGAATATCAAGATGAGCACGACCTC
CTTCGGTCTGAAGTTGAGAACGTCAAGGGCATCCTTGAACAGCTTCCAGATGGATGCTTC
AAGCGGATCGTACTGGAGCCCACCGAAGGACCGAGCAGGTCGGCCAATTATAGGTAG
(4737 bp)

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