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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA001925-TA
JBrowseBomo_Chr19
chromosome_No.
Scaffold_id
Scaffold Length		chromo19
Bm_scaf28
4702674 bp
UniRef
UniRef50_Q9Y113 (69%/581)
Cluster: Negative elongation factor B homolog; n=6; Endopterygota|Rep: Negative elongation factor B homolog - Drosophila melanogaster (Fruit fly)
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
Orthologue
Sequence
(Amino Acid)
MASSSKLPGTGLEEVGVPGQTFLRDALTSCTDPLKAIEEFQLENGILLPSLRPMLPLLDL
HGVRRLDFHTSVLEELREKLIAHINELGNKDNKDNDKKLKELLSKSFPVVRVKALRPVIM
GILKNIPHIDDKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKED
VLFDHENLTNLFFSPSPKVRRQGAVVQKLAHMIGTSVKLYDMVLQFLRTLFLRTRNVHYC
TLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIRERNVDIKRSRELQGFLDSIKKGQE
QVLGDLSMTLCDPYAINFLATSAIKILQHLINTEGLPRDSTVLILLLRMLALGLSAWVMI
DSQEFKEPKLDSQCVTKYLPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDAC
EAYMRESSVCGVIAMYYTLHAAKLRDRGALLRILSILGSCKDGRAYEDPFLHALVALLVQ
LPDEFQGEDFSTVLFDEFFFAGLSKDNVTRHLLKLLWYIHPKLPETRIQTLMKALQPGTQ
HNESVHKLYETLQQKLNAQTEPGPSATEMEYLDSPLMSVRTPAPYHM
(587 a.a.)
Sequence
(Nucleotide)
ATGGCGTCGTCAAGTAAACTACCAGGCACTGGTCTAGAAGAAGTGGGAGTACCAGGACAA
ACTTTCTTGCGAGATGCTCTGACAAGCTGTACCGACCCATTGAAAGCTATTGAAGAGTTT
CAACTTGAAAACGGTATTTTATTGCCTTCTTTAAGGCCGATGCTGCCTTTACTAGACCTC
CATGGCGTTCGGCGGCTTGACTTTCATACATCAGTTCTGGAGGAATTACGTGAAAAACTC
ATTGCCCACATCAACGAGCTTGGCAATAAAGATAACAAGGATAATGACAAAAAACTCAAA
GAACTGCTATCTAAAAGCTTCCCAGTCGTCAGAGTTAAAGCTTTAAGACCTGTTATAATG
GGTATTCTTAAAAATATCCCACATATAGATGATAAGTATCTAAGGGTACTAGTTCGCGAC
AGAGAACTGTACAATGACACAGATACTGAGGTGAAGCGTCAAATATGGCAAGACAACCAG
TCACTGTTTGGAGATGAAGTTTCTCCACTCCTCAGTCAGTACATCAGGGAGAAAGAAGAT
GTTCTGTTTGATCATGAAAATCTTACAAATCTATTTTTTTCCCCTTCCCCAAAAGTAAGG
AGACAAGGTGCAGTTGTTCAGAAACTTGCCCACATGATAGGTACTAGTGTTAAGTTATAT
GACATGGTGTTACAATTCCTGAGAACATTATTCTTAAGAACTAGAAATGTTCATTATTGT
ACATTAAGAGCAGAGCTTCTCATGGCCTTGCATGACCTAGAAGTTCAAGACATCATATCT
GTAGACCCTTGTCATAAATTCACATGGTGTTTGGATGCTTGTATCAGGGAAAGGAATGTA
GACATTAAAAGATCTAGGGAACTGCAAGGTTTTTTAGACAGTATTAAAAAGGGACAGGAG
CAAGTTCTAGGAGATCTTTCTATGACGTTATGCGACCCTTATGCTATCAATTTCTTAGCA
ACGTCAGCTATCAAAATTTTACAACATTTAATAAACACTGAAGGGCTACCTCGAGATAGT
ACAGTTTTAATACTACTGCTAAGAATGTTGGCATTAGGGTTGAGCGCTTGGGTAATGATC
GATTCTCAAGAATTCAAAGAGCCAAAATTAGATAGTCAATGTGTCACAAAATACTTGCCT
GCCTTGATGTCATTGATGGTGGATGATCAAGTGAGAGCACTACATAATAAGTTACCTCCA
GATGAAAGAGAGTCTGCCATCACTACGATAGAGCACTCGGGACCTCCACCTGATGCTTGT
GAAGCCTATATGAGAGAAAGCTCAGTTTGTGGTGTTATTGCAATGTACTACACACTGCAT
GCAGCCAAATTACGTGACCGTGGTGCCTTACTTCGCATTCTTAGTATTCTCGGTAGTTGT
AAAGATGGTAGAGCATATGAAGACCCATTTTTGCATGCTTTAGTGGCACTTCTAGTACAG
TTACCTGATGAGTTCCAAGGAGAAGATTTTAGTACTGTATTATTTGATGAATTCTTCTTT
GCTGGACTATCTAAGGATAATGTGACAAGACACTTATTGAAATTGCTGTGGTATATTCAT
CCAAAATTACCAGAGACTAGAATTCAAACTCTTATGAAAGCGCTGCAGCCTGGAACTCAG
CATAATGAATCTGTACATAAATTATATGAGACTTTACAACAGAAATTAAATGCGCAAACA
GAACCCGGTCCGAGTGCAACTGAAATGGAATATCTGGACTCCCCGTTAATGAGTGTACGC
ACGCCAGCACCATATCATATGTAG
(1764 bp)

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