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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA001479-TA
JBrowseBomo_Chr21
chromosome_No.
Scaffold_id
Scaffold Length		chromo21
Bm_scaf7
8313734 bp
UniRef
UniRef50_UPI00015B576D (38%/216)
Cluster: PREDICTED: similar to type II collagen, putative; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to type II collagen, putative - Nasonia vitripennis
Ontology
GO:0005515 F protein binding
Orthologue
Sequence
(Amino Acid)
MFGVTAQGDCSDLRGRVISHGIHYVPGPNSCNLCICDNGLPKDCKVVLCSPPQDCRSFRV
GNNCCEFICLDDVVKPPDSNESNFRGAAGGAAAVVVLTVLLVLYRVRNQKRRRPPHGDDQ
RSLTSIGIFERYISGSMGYMGGTCETALGAWKPHGYYLPRGEAPPPYDEAVAQCRQEVMR
IQSEAAFHRTYPATVESLTRPDEAMQCVGHGYANIPRPVQQLVNPQNCYNTPLLQAVHTT
DARDPNQIQHHPLGPPGGVGFPSAIRLTGSLGTINNRGLLSVLHDHDRPNLYPNPGSLHT
PFHRTIPLGGPGADVRRSFHRAPPPRPHTGRSVPRNLDLAAGPHAAPDAAPDVGAGQTRT
RSEEQNVGGAVTTNANANAGAAGNNAAVADSAGAVPSAGEGGAPPAPDAPLPPPHNTLPL
TVDKRINLAYNKQYGGRVPFKYNLQPSCVCSYEAPAAPGGEDADDYRSECENCKSASSSK
(480 a.a.)
Sequence
(Nucleotide)
ATGTTTGGTGTTACGGCTCAAGGAGATTGCAGTGATCTGCGAGGTCGAGTCATTTCCCAC
GGCATACATTACGTGCCCGGACCAAACTCCTGTAACCTTTGTATATGCGATAATGGACTA
CCTAAAGACTGCAAAGTTGTACTGTGTTCGCCACCCCAGGATTGTCGCTCATTTCGAGTC
GGCAACAATTGCTGCGAGTTTATTTGCTTAGATGATGTAGTGAAGCCACCTGACTCAAAC
GAGTCGAACTTCCGTGGGGCAGCTGGCGGTGCTGCGGCAGTAGTGGTGCTCACAGTACTG
TTAGTACTGTACAGAGTAAGGAACCAGAAGCGTAGACGTCCACCACATGGGGATGACCAA
AGAAGCCTGACTAGTATTGGTATATTTGAAAGGTACATCAGTGGAAGCATGGGCTACATG
GGTGGCACTTGTGAGACAGCTCTGGGTGCCTGGAAGCCACATGGTTACTATCTGCCAAGG
GGTGAAGCGCCTCCACCTTATGATGAGGCTGTGGCACAGTGCAGACAGGAAGTCATGAGG
ATTCAAAGTGAAGCAGCTTTTCACCGAACATATCCTGCAACAGTAGAGTCTCTCACTAGG
CCAGATGAGGCCATGCAGTGTGTCGGTCATGGCTATGCTAATATTCCACGACCTGTTCAA
CAGTTGGTGAATCCTCAGAACTGCTACAACACTCCTCTACTGCAGGCTGTGCACACGACT
GACGCTCGGGACCCAAATCAAATCCAACACCACCCCTTAGGCCCTCCTGGAGGAGTGGGA
TTCCCCAGCGCCATCCGTTTAACCGGCTCTCTGGGTACCATCAACAACCGCGGTTTGTTA
TCCGTGTTACATGATCACGATCGTCCCAACTTGTACCCTAATCCTGGGAGTTTACACACT
CCATTCCACCGCACCATCCCGCTGGGGGGGCCGGGCGCGGACGTGCGGCGCTCGTTCCAC
CGCGCGCCCCCCCCGCGCCCCCACACCGGCCGCTCCGTGCCGCGCAACCTGGACCTGGCC
GCCGGACCGCACGCCGCGCCCGACGCCGCACCGGACGTCGGCGCCGGACAGACACGGACA
CGCAGCGAGGAACAGAACGTGGGTGGAGCGGTGACCACAAATGCTAATGCTAACGCGGGA
GCTGCTGGGAACAACGCGGCTGTGGCGGACAGCGCGGGGGCTGTCCCGAGCGCGGGCGAG
GGGGGTGCCCCTCCCGCCCCCGACGCGCCCCTTCCACCCCCACACAACACATTACCCCTC
ACTGTGGACAAGCGAATCAATCTGGCCTATAACAAACAGTATGGCGGGCGTGTACCATTC
AAATATAATTTGCAGCCGTCGTGCGTGTGCAGCTACGAAGCCCCGGCCGCTCCCGGGGGC
GAGGACGCCGACGACTACCGCAGCGAGTGCGAGAACTGCAAGTCCGCCAGCAGCTCCAAG
TGA
(1443 bp)

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