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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA001281-TA
JBrowseBomo_Chr13
chromosome_No.
Scaffold_id
Scaffold Length		chromo13
Bm_scaf1
16203812 bp
UniRef
UniRef50_UPI00015B5ED2 (36%/109)
Cluster: PREDICTED: similar to gem (nuclear organelle) associated protein 5; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to gem (nuclear organelle) associated protein 5 - Nasonia vitripennis
Ontology
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
Orthologue
Sequence
(Amino Acid)
MLDVEKISFLDLDLGFFGQCNHRIPGTAVGVKVVILNVTVQRIVSVDLSPEWPEKRCILT
GAADGTVKQWVITNIAQEFKINSTHSHEVHHNEKEEVTGVGYSNEQFAITVGSFGTVVKW
DLKSNVVKNYQHLLKSFKPVCMSCSSHLLLHVAVGTKQGVIFVLDLNGQGKTIYKVRGQD
DEIMTVSWCPQYEVVIKKLLKESDKRPSVSERLHKIRNEPEPDEIEDSNPKSSENLEASG
MVKSLPEDSFDESVTVEDDMFDIYKDHEADEFGHKKYQPEEIRVKIKPDLKQEDYLAECL
KLKEQILRNKNETEESIESLVEALDKTHVSNDESHNDVLDDKNKDDLVQGSDHVHKHLLA
TIGKLGGVRIWSKTGKLIASCAVPQNKNMKIKSPSWPSLLWYKSNMLLIGDNRTISVGDG
TVRIWETNTLDHDDTKLAAGTITAYWQNVQGRVLTLAWHPTKENWLAFSTAESRVGILDT
SGRGARALVPGLAGGVYSLCWGLRSHLYACASGQLVVYDAARPDQRTTDLSL
(532 a.a.)
Sequence
(Nucleotide)
ATGTTAGATGTAGAGAAAATCAGTTTTTTGGATCTGGATCTCGGTTTTTTCGGACAGTGT
AATCACCGAATTCCGGGTACAGCAGTTGGCGTCAAAGTCGTCATTTTGAATGTTACTGTG
CAAAGAATTGTAAGTGTTGACCTATCACCAGAATGGCCAGAGAAGAGATGTATCCTAACA
GGTGCTGCTGATGGAACAGTTAAGCAGTGGGTGATCACTAATATAGCCCAAGAATTCAAG
ATAAATTCAACACACAGCCATGAAGTGCATCATAATGAAAAAGAAGAAGTAACTGGTGTT
GGGTATAGCAATGAACAATTTGCAATAACAGTTGGTTCTTTTGGAACTGTTGTTAAATGG
GATCTGAAATCAAATGTAGTTAAAAATTACCAACACCTGTTGAAAAGTTTCAAGCCAGTA
TGTATGTCCTGTTCATCACATCTGCTGCTACATGTTGCTGTTGGTACTAAGCAAGGGGTT
ATATTTGTCTTGGATCTGAATGGTCAGGGAAAAACTATTTACAAAGTTCGAGGTCAAGAT
GATGAGATAATGACTGTAAGTTGGTGCCCACAGTATGAAGTTGTTATAAAAAAATTGTTG
AAGGAATCGGATAAAAGACCCAGTGTATCTGAAAGACTACATAAGATAAGAAACGAACCA
GAACCTGATGAAATTGAAGATTCAAATCCGAAGAGTAGTGAAAATTTAGAAGCGTCTGGC
ATGGTTAAGAGCCTTCCTGAAGATAGTTTTGATGAATCTGTCACTGTAGAAGATGATATG
TTTGACATTTATAAAGATCACGAAGCTGATGAATTCGGACACAAAAAATATCAACCAGAA
GAAATACGTGTAAAAATAAAACCAGATTTGAAACAAGAAGATTATTTAGCTGAATGTTTG
AAATTGAAGGAACAAATTTTACGAAATAAAAATGAAACAGAAGAATCTATAGAGTCATTA
GTTGAGGCCCTAGACAAAACTCACGTCAGTAATGATGAATCACATAATGATGTATTAGAT
GATAAAAACAAAGATGATCTAGTACAAGGCAGTGATCATGTGCATAAGCATCTTTTAGCT
ACAATTGGAAAATTGGGTGGAGTAAGAATATGGTCGAAAACCGGCAAGTTGATAGCAAGT
TGTGCAGTGCCACAGAACAAGAACATGAAAATAAAATCACCCAGCTGGCCTTCATTATTA
TGGTATAAATCGAATATGCTACTCATCGGAGACAACAGAACAATAAGCGTTGGAGATGGT
ACAGTTCGCATCTGGGAAACCAATACACTGGATCATGATGATACTAAACTTGCTGCTGGC
ACCATTACTGCCTACTGGCAGAATGTTCAAGGAAGAGTTTTGACATTAGCCTGGCATCCG
ACAAAAGAAAATTGGCTAGCCTTCAGCACTGCCGAGTCCAGAGTGGGGATCCTGGACACG
AGCGGTCGCGGCGCCCGCGCGCTGGTGCCGGGGCTGGCGGGCGGCGTGTACTCGCTGTGC
TGGGGGCTGCGCTCGCACCTGTACGCCTGCGCCTCCGGACAACTCGTCGTGTACGACGCC
GCCAGACCGGACCAACGTACGACCGACTTATCACTATAA
(1599 bp)

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