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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA001124-TA
JBrowseBomo_Chr13
chromosome_No.
Scaffold_id
Scaffold Length		chromo13
Bm_scaf1
16203812 bp
UniRef
UniRef50_P27864 (48%/401)
Cluster: Recombination repair protein 1 (DNA-(apurinic or apyrimidinic site) lyase); n=8; cellular organisms|Rep: Recombination repair protein 1 (DNA-(apurinic or apyrimidinic site) lyase) - Drosophila melanogaster (Fruit fly)
Ontology
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
Orthologue
Sequence
(Amino Acid)
MAPRSAKAKKAAEAKVADNDAPKKGRGKAKVVEDPETESVEAEVDEKNIVSEKKTKRGRK
AAGDTNGQDENGKIEETAPKKGRKKNVEEPPVENKSTDEPSVEDEVAVSEENNPSEDGSE
TNGHIEEEQVPSGRGRKKQTKKEVKKPEPRTGRGRKPKQEIEDEVEDKPKGRGRGRKAKA
EEAESDISETVEDEGKPEAAKGKKKVQNQAVEKPAENDDDEVEEENVEEPKKKETKSRKN
QGKKVAAKEETDDAVREDEPASKKRKVTKKDEKQKAAQNEDDNVDEEEKPEPKPAKGRRG
QKKAEVSAESHEEPQDTGEPTTKRRRKPVEEKVNTEDAKKKAPPKNKSTTNYEDIDFTNE
SKTTQGKEWNFKIASWNVDGIRAWMSKGGLDYIKYEKPDIFCLQETKCATDKLPDEVANV
PGYHAYWLAGDKDGYAGVGIYTTKLAMNVKYGLQNEELDDEGRIITAEYEQFYLICTYVP
NAGRKLVTMPKRLRWNEEFLKHVKELDKKKPVIICGDMNVSHKEIDLANPKTNRKNAGFT
DEERAGMTQLLGDGFVDTFRHFHPDQTGSYTFWTYMMNSRSKNVGWRLDYFIVSDRLIPS
VCDNVIRDKVYGSDHCPIALFLNLTTAEKPKE
(632 a.a.)
Sequence
(Nucleotide)
ATGGCACCAAGATCAGCAAAAGCTAAGAAAGCAGCAGAAGCAAAAGTAGCAGACAATGAT
GCACCTAAAAAAGGAAGAGGCAAAGCAAAAGTAGTTGAAGATCCTGAAACGGAGTCTGTA
GAAGCTGAAGTTGATGAAAAGAACATTGTATCTGAAAAGAAAACCAAACGCGGAAGGAAA
GCTGCCGGTGACACAAATGGACAAGATGAGAATGGTAAAATAGAGGAAACAGCACCAAAA
AAAGGAAGGAAGAAGAATGTAGAGGAACCTCCGGTGGAAAATAAATCTACTGATGAACCC
TCAGTTGAAGATGAAGTGGCAGTGTCTGAGGAAAATAATCCTAGTGAAGATGGTTCAGAA
ACAAATGGTCACATAGAAGAAGAACAAGTTCCTTCAGGTAGGGGACGTAAGAAACAAACC
AAAAAGGAAGTTAAAAAACCAGAGCCTAGAACAGGCAGAGGTAGGAAACCTAAACAAGAA
ATAGAAGATGAAGTTGAAGACAAACCAAAAGGTAGGGGCAGAGGACGCAAAGCCAAAGCT
GAAGAAGCTGAGTCTGATATATCTGAAACTGTTGAGGATGAAGGAAAGCCAGAAGCTGCT
AAAGGCAAGAAGAAAGTTCAGAACCAAGCTGTTGAGAAGCCTGCAGAGAATGATGATGAT
GAAGTAGAAGAGGAAAATGTAGAGGAACCAAAAAAGAAGGAAACCAAAAGTCGCAAAAAT
CAGGGCAAAAAAGTAGCAGCCAAAGAAGAGACTGATGATGCTGTGAGGGAAGATGAACCA
GCTTCTAAGAAAAGGAAGGTCACAAAAAAAGATGAAAAACAAAAAGCTGCACAAAATGAA
GACGATAATGTTGATGAAGAGGAAAAACCTGAACCAAAGCCTGCAAAAGGAAGGCGGGGT
CAAAAGAAGGCAGAAGTATCTGCTGAATCCCATGAGGAGCCACAGGACACTGGTGAGCCA
ACTACAAAACGTCGACGCAAGCCTGTCGAAGAAAAGGTGAACACCGAAGACGCGAAAAAG
AAAGCACCGCCCAAGAATAAATCCACGACAAATTACGAAGATATTGACTTTACAAATGAA
TCGAAGACGACGCAAGGCAAAGAATGGAACTTCAAGATAGCGAGTTGGAACGTTGACGGG
ATCAGAGCGTGGATGAGCAAAGGAGGCTTGGATTACATCAAATACGAGAAGCCGGACATT
TTCTGTTTGCAAGAGACGAAATGTGCAACGGACAAATTGCCAGACGAAGTGGCTAATGTT
CCAGGCTATCATGCGTACTGGTTGGCCGGGGACAAAGATGGCTACGCAGGCGTAGGCATT
TACACGACAAAGCTAGCGATGAATGTCAAATATGGCTTGCAAAATGAAGAGCTGGACGAT
GAAGGTCGCATTATAACGGCGGAGTACGAACAGTTTTACTTGATTTGTACGTACGTACCG
AACGCGGGCCGGAAACTAGTCACAATGCCCAAAAGGCTGCGATGGAACGAGGAATTCCTC
AAACACGTCAAAGAATTAGATAAGAAGAAACCTGTGATAATATGCGGCGACATGAACGTT
TCCCATAAGGAAATCGATTTAGCGAATCCGAAGACGAACAGAAAGAATGCCGGCTTCACG
GACGAGGAGCGCGCCGGCATGACGCAGCTGCTCGGCGACGGGTTCGTCGACACCTTCCGA
CATTTCCACCCCGACCAGACGGGCTCGTACACTTTCTGGACGTACATGATGAATTCCCGT
TCGAAGAACGTCGGATGGCGTTTGGATTACTTCATAGTTTCCGACAGACTGATTCCGTCG
GTCTGCGACAACGTCATCCGCGACAAGGTGTATGGCAGCGACCACTGTCCGATAGCGCTC
TTTCTAAATCTAACAACAGCCGAGAAACCGAAGGAATAA
(1899 bp)

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