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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA000950-TA
JBrowseBomo_Chr13
chromosome_No.
Scaffold_id
Scaffold Length		chromo13
Bm_scaf1
16203812 bp
UniRef
UniRef50_Q9VQ76 (51%/1207)
Cluster: CG31671-PA; n=8; Endopterygota|Rep: CG31671-PA - Drosophila melanogaster (Fruit fly)
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0008380 P RNA splicing
Orthologue
Sequence
(Amino Acid)
MGSYAKFVSDYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSGFSQSVYDFLLCG
LKGNLKKDTVLSFLREITNLHADVPSIILDIISILDAETSLDVQSDERAYFCYIVRELEP
FISDKLLKERLEIDTLQDAGTLKNKNFYTKFIKIKTKLYYKQRKFNLFREESEGYSKLIV
ELNQEINEDTEWKNLLEIIQSLIGCFNLDPNRVLDIILESFEARPQLDALFIPLIKSYMA
DPHVISEVLGFKLSNMEILDNYTEPPPLMTVIALLLQHQVISFDDIYPWLRPDDVIIAKQ
ADKEIKAVQEYIRKINIVSTKGPQTNAPTEFIEDKADPQEYWSNQKLVLCETLLRVNAWR
EFASLFARLPTTTMPPRPAIALCGLLHAVVEPLYRKQCRVASKILGKPVPPLKSNLAPPN
CKTFEDMKETVIPALILLGPALHHDPVLMYKVIRILRTARGQKDDPLHFEALTVLDTAIL
PALTLMEGNCCMAEEVYTLLKLYPYQCRYCLYARWKNEAGERIPALIRVRGNSLQKIKHI
MKRVSKENIKPQGRLIGKLSHAAPAFLFDYVLLQIQTYDNLIGPVVESMKYLTSLSLDVL
GYCLVEALGSRRSTPPAWLQALASFAGAAFKKHNIELTALLQFVANRLKAQQSQDLIVLK
EIVQKMAGIEAAEEMTPEQLEAMAGGELLKGEAGYFSQVRNTRRSSARLKDAIVGNNLDI
SLCILAAQQRHCCVWKEYEDDIQISGEPPGSQLKVVGRLADQCQDALVQLGTFLASSHAP
DEYAARLPSLQELLRDYHVDADVAFFLHRPVINQKISAKLESLRKASDSKSDSIEKIIER
YNVASKEALEPIVSSIQPMLPARVLEDISPEFYVTFWSLSMYDLRVPVESYEREIERLKT
AAANVSKDSSQGTKVKKEQERFNTLIEKLQEERRRQAAHVAAVRARLARECEDWFPARAV
RSAKNETVTRLMQLCIFPRCVFTAADALYCAEFVHTVHSLKTPNFSTLLCYDRLFCDITY
SVMSCTEAEAARYGTFLCKVLTTAMRWHADKDAFHRECAHYPGFVTKYRVSKQFTEANDH
VGYENYRHVCHKWHYKITKAMVVCLDSGDYVQIRNALIVLIRVLPHFPVLAKLSQIIEKK
IDKVKEQEKIQRQDLYVLATVYSGQLRNKSSNMMNEADFHQMSDKHKAASTAAASAAPAK
EEVVADPEPAPAPAPPPQESEKRDSRNSDRRRDEADRDKDSKRESKTYASKELEERSPEK
EKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIKMSGHQNGSQEDHHYDK
FKREKSPFRDRSHEEARDKQYPFQRTK
(1347 a.a.)
Sequence
(Nucleotide)
ATGGGATCCTACGCAAAATTCGTATCTGATTACTGTAAAAACTGGGACAAATCTGGTCGA
GAATTGTTCTTGAAACATTTGACGCAATTCACAAAAGATGAACATAGGACTCCACTATTT
TCAAAGTCTGGGAAAATGTCTGGATTTTCTCAAAGTGTCTATGATTTTCTTCTTTGTGGC
CTGAAAGGAAACCTTAAAAAAGATACCGTTTTATCCTTCTTAAGAGAAATAACTAATTTG
CATGCAGATGTGCCATCAATAATATTGGATATCATATCAATTTTGGATGCTGAAACCAGC
CTAGATGTACAAAGCGATGAGCGGGCTTATTTCTGCTACATTGTGAGAGAGCTGGAGCCA
TTTATTTCTGATAAGTTACTAAAAGAAAGATTAGAGATAGATACATTACAAGATGCTGGT
ACTCTTAAGAACAAAAACTTCTACACCAAATTCATAAAGATCAAGACTAAATTATACTAC
AAACAACGTAAATTTAACTTATTTCGAGAAGAAAGTGAAGGATACTCAAAGTTAATAGTT
GAATTAAACCAAGAAATAAATGAAGATACAGAATGGAAAAATTTGCTTGAAATAATTCAA
TCTCTTATTGGTTGTTTTAATTTGGATCCAAACAGGGTACTTGACATAATTCTAGAATCG
TTTGAAGCCCGACCACAATTAGATGCTCTTTTTATACCGCTTATTAAGAGTTACATGGCA
GATCCTCATGTAATTTCTGAGGTTTTAGGTTTCAAACTGAGTAATATGGAAATTCTTGAT
AACTATACAGAACCTCCACCGTTGATGACTGTAATTGCATTGCTTTTACAACATCAGGTT
ATATCATTCGATGACATCTATCCATGGCTTCGCCCAGATGATGTGATAATAGCTAAACAA
GCTGATAAAGAAATAAAAGCAGTTCAAGAATATATAAGAAAAATTAACATTGTGTCTACC
AAAGGACCACAAACAAATGCCCCCACTGAATTTATAGAAGATAAAGCTGATCCGCAGGAA
TATTGGAGCAATCAAAAGCTAGTGTTATGTGAAACTTTATTGAGAGTCAATGCGTGGCGA
GAGTTTGCCTCACTGTTTGCGCGTCTTCCCACTACTACGATGCCGCCAAGACCAGCAATA
GCCCTTTGTGGGTTGCTGCATGCTGTTGTAGAACCATTGTATCGAAAGCAATGCCGAGTA
GCTTCAAAAATACTCGGAAAACCAGTACCTCCACTTAAATCAAATTTAGCACCACCTAAT
TGTAAAACATTCGAAGACATGAAAGAAACAGTTATACCAGCCCTTATATTGCTTGGTCCA
GCCCTTCATCATGACCCTGTCTTGATGTACAAAGTCATTAGAATACTTAGAACTGCTCGC
GGTCAAAAAGATGATCCGTTACATTTTGAGGCACTAACCGTTTTGGATACCGCAATATTA
CCGGCTCTTACACTGATGGAAGGGAATTGTTGTATGGCTGAAGAGGTGTACACATTACTT
AAGTTATATCCATATCAGTGCAGATACTGTCTCTATGCGCGTTGGAAAAATGAGGCTGGC
GAACGAATACCTGCTCTCATTCGTGTCCGGGGGAACTCATTGCAGAAAATAAAACACATA
ATGAAACGAGTATCCAAAGAGAATATCAAGCCCCAAGGTCGTCTCATCGGGAAACTGTCG
CACGCCGCCCCGGCCTTTCTGTTTGATTACGTGCTCTTGCAGATACAAACATACGACAAT
CTGATAGGACCAGTAGTAGAATCCATGAAATATTTGACGTCTCTATCTTTAGATGTTCTG
GGATACTGTTTAGTTGAGGCTTTAGGCTCTCGACGTTCGACGCCACCTGCGTGGCTACAA
GCACTAGCCTCGTTCGCCGGGGCAGCCTTCAAGAAACACAATATTGAGTTAACTGCTCTT
TTGCAGTTTGTTGCTAATCGACTCAAAGCTCAACAGAGTCAAGACCTGATAGTATTAAAA
GAAATAGTACAAAAAATGGCCGGTATAGAAGCTGCTGAGGAAATGACACCCGAGCAGTTA
GAGGCTATGGCAGGAGGTGAACTACTTAAAGGAGAGGCTGGTTACTTTTCACAAGTGCGT
AACACGAGACGCTCTTCTGCGCGACTGAAAGATGCCATAGTCGGAAACAACTTAGACATA
TCTCTTTGTATATTGGCGGCGCAACAGAGACATTGTTGTGTTTGGAAAGAATACGAAGAT
GACATTCAAATAAGTGGCGAACCTCCAGGGTCCCAGCTAAAGGTGGTGGGTAGATTGGCA
GACCAATGTCAGGATGCTCTGGTTCAGCTTGGTACATTCTTAGCATCGTCACATGCTCCC
GATGAATATGCGGCGAGGCTGCCATCGTTACAGGAACTGCTGCGTGATTACCATGTAGAT
GCAGATGTCGCATTCTTTTTGCATCGTCCAGTTATAAACCAAAAGATATCCGCCAAGTTG
GAATCTTTACGTAAAGCATCGGACAGCAAATCGGATTCAATAGAGAAGATTATAGAAAGA
TACAATGTGGCATCAAAGGAAGCCTTGGAGCCTATTGTATCGTCGATACAACCGATGCTG
CCTGCGAGGGTTTTAGAAGACATTTCGCCTGAGTTTTACGTTACATTCTGGTCATTATCC
ATGTACGATCTTCGAGTGCCGGTCGAAAGTTACGAGAGGGAAATAGAACGCTTAAAAACA
GCAGCAGCTAACGTCAGCAAGGATTCGTCTCAAGGAACCAAAGTTAAGAAAGAACAGGAA
CGTTTCAATACGCTCATCGAAAAACTACAGGAGGAGCGGCGCCGACAGGCCGCGCACGTG
GCGGCGGTGCGGGCGCGGCTGGCGCGCGAGTGCGAGGACTGGTTCCCGGCGCGGGCGGTC
CGCTCCGCCAAGAACGAGACCGTGACGCGGCTCATGCAGCTGTGCATATTCCCGCGCTGC
GTGTTCACGGCGGCCGATGCCCTCTACTGCGCCGAGTTCGTGCATACCGTGCACTCTCTG
AAGACTCCCAATTTCTCCACTCTTCTGTGTTATGATAGATTGTTTTGCGACATCACGTAT
TCGGTGATGTCTTGCACGGAGGCGGAGGCGGCGCGGTACGGCACGTTCCTCTGCAAGGTG
CTGACGACCGCCATGCGCTGGCACGCCGACAAGGACGCCTTCCACCGAGAGTGCGCGCAC
TACCCCGGCTTCGTCACCAAGTACCGCGTCTCCAAGCAGTTCACTGAAGCTAATGATCAT
GTCGGATATGAAAACTACAGGCACGTGTGCCACAAATGGCATTATAAAATAACCAAAGCA
ATGGTTGTTTGCTTGGATTCAGGCGACTACGTGCAAATACGTAACGCCCTCATAGTTCTA
ATAAGAGTCTTACCTCATTTTCCTGTTCTGGCTAAGCTAAGTCAAATTATCGAAAAGAAA
ATTGATAAGGTTAAGGAACAAGAGAAAATACAAAGACAAGATCTTTATGTGTTAGCAACG
GTCTACAGTGGACAGCTACGGAACAAGTCCTCGAATATGATGAATGAAGCTGATTTCCAT
CAGATGAGCGACAAGCACAAAGCGGCGAGCACCGCGGCCGCCAGCGCTGCGCCCGCCAAA
GAAGAAGTGGTCGCAGATCCTGAACCCGCCCCTGCACCCGCGCCCCCACCACAAGAAAGT
GAAAAACGGGACTCGCGCAATAGCGACCGCCGCCGAGACGAAGCGGACCGAGATAAAGAT
TCCAAAAGAGAATCAAAAACGTACGCTAGCAAAGAATTAGAAGAGCGATCTCCTGAAAAG
GAAAAAAGGAAGACTAAAGTTAGAGGTGATGAACGCAAAGAGCGTAAGATGAACCGCAAG
AGGGACAGAGCTGAGGAATCTACAATTTTAGAACAAAAGAGACGCCGAGACGAACAAAAA
GGAGCAATCAAGATGAGCGGTCATCAGAATGGTTCTCAAGAAGATCACCATTACGACAAA
TTCAAAAGGGAGAAATCACCATTCCGTGACCGTTCCCACGAAGAAGCCAGAGATAAACAA
TATCCTTTTCAAAGAACAAAATAA
(4044 bp)

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