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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA000891-TA
JBrowseBomo_Chr13
chromosome_No.
Scaffold_id
Scaffold Length		chromo13
Bm_scaf1
16203812 bp
UniRef
UniRef50_Q4V4V5 (74%/271)
Cluster: IP12579p; n=6; Endopterygota|Rep: IP12579p - Drosophila melanogaster (Fruit fly)
Ontology
GO:0004890 F GABA-A receptor activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
Orthologue
Sequence
(Amino Acid)
MTSYQNKYCMIVTKGFEFTSLVNKSMSKTRKSAGEGNKASSSSIGSDGHPLIVRLQVQAK
GAIYLTTKNGTFPIMLTSHDEATPRHTPKILSAAKNTSRDTAEPDYWDNINEIMFSNYAN
SSFEQTDVFTWKQNKRSINDAVSKNITSVLENLLKNYENSQLPTHGKGYPTVVQTNILIR
SMGPVSELDMDYSMDCYFRQYWRDTRLSFLGPIRSLSLSIKMLERIWRPDTYFYNGKHSY
VHTITVPNKLLRISQHGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGSYAYSNQQLV
YQWQNSQSVNFVPGMTLSQFDLISFPYRNFTFTRREGDFSVLQVSFNLKRHTGYFLIQVY
VPCILIVVLSWVSFWIHREVGSGEIVIDDSEWEELIEEVGGDAVAARELAVRRRSSARSA
TNNLSMPSQSSNPTTSDNLETEQPVAVRLTMERTTQTETRVPRWRQLLYCLAGDDRYRRQ
RQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIYAFSSDDFAWSDNPINTLSH
(539 a.a.)
Sequence
(Nucleotide)
ATGACGTCATATCAAAATAAGTACTGCATGATTGTTACTAAAGGTTTCGAATTCACATCA
CTCGTGAACAAGTCCATGTCGAAAACTAGGAAGTCAGCCGGCGAAGGAAATAAGGCATCT
TCCTCTAGCATCGGGAGTGACGGGCACCCTCTGATCGTCCGTCTCCAAGTACAAGCAAAA
GGAGCTATATACTTGACAACTAAAAATGGAACGTTTCCAATAATGTTGACATCCCATGAC
GAAGCTACGCCGCGGCACACTCCAAAGATTTTGTCTGCGGCGAAAAACACGTCACGAGAT
ACCGCAGAACCCGACTACTGGGACAACATAAATGAAATAATGTTTTCCAATTACGCCAAC
TCTAGTTTTGAACAGACAGACGTGTTTACGTGGAAACAGAACAAGAGAAGTATAAACGAT
GCCGTCTCTAAAAATATAACTTCTGTTTTGGAGAACCTTTTGAAGAACTATGAAAATTCT
CAGTTGCCAACGCATGGTAAAGGTTATCCAACTGTAGTTCAAACCAACATCCTAATAAGG
AGCATGGGACCAGTTTCAGAACTCGATATGGATTATTCGATGGATTGCTACTTCAGGCAA
TATTGGCGTGACACGAGGCTGTCGTTTCTCGGTCCCATCCGCTCTTTGTCCCTTTCCATC
AAGATGCTCGAGAGGATTTGGAGGCCAGACACGTATTTTTACAACGGAAAACATTCCTAT
GTACACACTATCACTGTACCGAATAAACTGCTTCGCATCAGTCAACACGGTGATATTTTG
TATTCAATGAGATTAACTATTAAAGCTAAATGCCCTATGGAACTTCGTAATTTTCCGATG
GATCGTCAATCGTGCCCTCTTATCCTTGGCAGCTACGCCTACTCGAATCAACAACTAGTT
TATCAATGGCAAAACTCGCAGAGCGTCAACTTTGTTCCCGGAATGACCCTCTCACAGTTT
GACCTTATCAGTTTTCCGTACAGAAATTTCACATTTACCAGACGAGAAGGTGATTTTTCA
GTGTTACAAGTCTCTTTCAACCTCAAAAGGCACACCGGCTATTTTCTTATTCAAGTGTAC
GTGCCCTGCATCCTTATAGTAGTCCTTTCTTGGGTCTCGTTCTGGATTCATCGCGAGGTC
GGTTCTGGTGAAATAGTTATCGACGATTCGGAATGGGAAGAGCTGATCGAAGAAGTCGGA
GGGGACGCGGTCGCGGCACGTGAACTCGCCGTACGTCGTCGTAGTTCTGCTAGATCCGCC
ACTAATAACCTCTCCATGCCATCCCAAAGTTCAAACCCAACGACTTCGGATAACTTGGAA
ACTGAACAGCCAGTTGCAGTCCGCCTCACCATGGAACGTACAACTCAGACCGAGACCAGA
GTGCCTCGTTGGAGACAACTCTTGTACTGCTTAGCTGGCGACGATCGCTACAGACGACAG
AGACAACGGGAAGCAGGGAGTAGGGGACACATCAACAGCGTCTCACACATCGACAGGGCT
GCACGTGTTTTATTCCCGGCTTCGTTTGCACTGCTCAATCTATTCTACTGGATGATATAT
GCCTTCTCGAGTGATGACTTTGCCTGGAGCGACAATCCCATTAATACCTTATCGCATTGA
(1620 bp)

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