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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA000757-TA
JBrowseBomo_Chr25
chromosome_No.
Scaffold_id
Scaffold Length		chromo25
Bm_scaf89
1495961 bp
UniRef
UniRef50_UPI00015B5DEE (45%/263)
Cluster: PREDICTED: similar to programmed cell death protein 11 (pre-rrna processing protein rrp5); n=1; Nasonia vitripennis|Rep: PREDICTED: similar to programmed cell death protein 11 (pre-rrna processing protein rrp5) - Nasonia vitripennis
Ontology
GO:0003723 F RNA binding
GO:0005488 F binding
GO:0005622 C intracellular anatomical structure
GO:0006396 P RNA processing
Orthologue
Sequence
(Amino Acid)
MVCWCAVKSVKQTADSSVVALGAAPDCLQAARLQHKPDSQLLPGNALHFTVDSAVDNGVK
GFVFDDVQACVLRQHLDKGKAKRPAVGQKVTARVLFVMPPRNMPYLTLKNIFETTYPDLE
QERKYKDGDIIEEAQVLKITGRSVHMKLDHGCTAVMSIKRIDIEEEMTDEEVIAKSYPVG
STHRVRVLNYNLSDYFYSVTDDPSVVNEKYFTMEQLSVGEIVDGHVKTVTDSYILVSLGR
MHGYVGLTHLTDTGVLLDPRQGSNPKLTKKFKVGQQVRARVLSVDPAKPALMLTLKPSLL
AADLDVLQRHDQAVIGKVYTGVIYAIRDYILVSFFNNLMAYVPKTMVSIEPIENLTEAFH
VGQIVSCTILNVDIENKKLLGSLIPTQTFRINRKRKAKEKHDSIGEERETEDEGATQINE
EKDKPKNKQTLASGDAPDKKKKKKKDNRVDGEMNGRTEGKTSEESDAIDTDLSEECEQVL
TPEDLALLDLSQCRTKKQYKKRIDSILNAVSEIHSGIPLLEEKIAKIEAKGLTTKNKMLH
TALHSEKLINEERAKKLNEGLETARRALADLRAEPHNNCTKQTDDVQPEVKENIENENIQ
KKIDKKRKANKERKNAKDETEIRDKKRKGTDDVRKTEDSKTDQGRKGRGEPAEKRRTVNV
TEELRPVLHAPSAKDFWSGTLDSGKTLQDQQSSSSDDEEKEQPKKKRKKLSVAEKLAKAR
EEEERLREMEKRAIESDAQPRSADHFQRALLANPSASQLWIAYMAFHLQATEIEKARAVA
RKALSTICFREEDEKLNVWLALINLENRFGTKESQQKTLEEALQMNDTFKVHSKLLDIYV
DTGKQQELSALVDLMLRKYKKDPKTYTLCGTACYKLNLKEKARYVMQKALNVLEKKEHVQ
VLVQFALLERDRGERERAEALLEQVLAVYPQRVDVCAVYVDMLVKENDIERVRQVMERIT
SHQLPARKMKVLYKKWIEVEEKIGDEGKAEIIRQRAIEYVEKAKF
(1005 a.a.)
Sequence
(Nucleotide)
ATGGTGTGCTGGTGCGCCGTGAAGTCGGTGAAGCAGACCGCGGACAGCAGCGTGGTGGCG
CTGGGCGCGGCGCCGGACTGTCTGCAGGCGGCGCGGCTACAGCACAAGCCCGACTCGCAA
CTGCTGCCCGGCAACGCCCTCCACTTCACCGTCGACAGCGCCGTAGACAACGGGGTCAAA
GGTTTCGTGTTCGACGATGTGCAGGCGTGCGTGCTGCGGCAACACTTAGATAAGGGCAAA
GCGAAGAGACCGGCGGTCGGGCAGAAGGTAACCGCCCGTGTGCTGTTTGTGATGCCGCCG
AGGAACATGCCCTATCTGACGCTGAAGAACATTTTCGAGACCACATACCCTGACCTCGAG
CAGGAGAGGAAATACAAGGATGGGGACATCATTGAGGAGGCGCAGGTATTAAAGATAACA
GGAAGATCGGTACATATGAAGTTGGACCACGGGTGTACCGCTGTGATGAGCATCAAGAGA
ATTGATATCGAAGAGGAAATGACGGACGAAGAAGTCATTGCCAAATCATATCCTGTTGGC
AGCACCCACAGAGTGAGGGTCCTCAACTACAATCTATCTGACTACTTCTATTCCGTGACG
GATGATCCCAGTGTTGTCAACGAGAAGTACTTCACCATGGAGCAGCTGTCCGTCGGCGAG
ATAGTCGACGGTCACGTGAAGACAGTCACCGACTCATACATCCTGGTCTCCCTGGGGAGG
ATGCACGGCTACGTCGGCCTCACTCACCTGACGGACACTGGAGTGCTGCTCGACCCCCGC
CAGGGTTCCAATCCTAAGCTCACCAAAAAGTTTAAGGTGGGACAGCAGGTCCGCGCGAGG
GTGCTGTCCGTGGACCCTGCCAAGCCGGCCCTCATGTTGACCCTGAAGCCGTCCCTCCTC
GCAGCCGACCTCGACGTGCTGCAGCGCCACGACCAGGCCGTGATCGGGAAGGTGTACACC
GGGGTCATATACGCGATCCGGGACTATATACTGGTGTCGTTCTTCAACAACCTGATGGCG
TACGTTCCGAAGACGATGGTCTCGATCGAGCCGATAGAGAACCTAACCGAGGCCTTCCAT
GTCGGACAGATTGTGAGCTGCACGATACTGAATGTGGATATCGAGAACAAGAAACTGCTG
GGCAGCCTCATACCGACGCAGACCTTTCGGATCAACAGAAAACGTAAAGCCAAAGAGAAG
CACGATTCAATCGGAGAAGAGAGGGAAACCGAAGACGAGGGAGCAACACAAATTAATGAG
GAAAAAGATAAACCAAAAAATAAACAGACATTAGCGAGCGGAGACGCTCCTGACAAAAAG
AAGAAAAAGAAGAAAGACAATAGAGTAGACGGAGAGATGAATGGGAGGACAGAAGGAAAG
ACATCCGAGGAGAGTGACGCCATAGACACTGACTTATCCGAGGAGTGCGAGCAGGTGTTG
ACTCCGGAGGACCTGGCGCTGCTCGACCTCAGCCAGTGCCGCACCAAGAAGCAGTACAAG
AAGAGGATCGATTCTATATTGAATGCGGTTAGCGAAATACACAGCGGCATTCCATTACTT
GAGGAGAAAATCGCAAAAATAGAAGCCAAAGGTTTGACGACGAAAAACAAAATGTTGCAC
ACCGCGCTGCACTCCGAGAAACTTATCAACGAGGAACGCGCCAAGAAACTTAACGAAGGT
CTCGAGACGGCTCGACGCGCGCTCGCCGACCTGCGCGCCGAACCTCACAACAACTGCACC
AAGCAAACCGACGACGTACAGCCTGAAGTGAAAGAGAATATTGAAAATGAAAACATACAA
AAGAAAATCGATAAGAAACGTAAGGCAAATAAAGAAAGAAAAAACGCTAAAGACGAAACA
GAAATACGCGATAAGAAGAGAAAAGGAACAGATGATGTCCGGAAAACAGAAGATAGCAAG
ACAGATCAGGGGAGGAAGGGACGAGGGGAGCCGGCGGAGAAAAGACGAACCGTAAATGTC
ACTGAGGAGCTGCGGCCCGTCCTGCACGCGCCCAGCGCCAAGGACTTCTGGAGTGGGACA
CTTGACAGTGGGAAGACCCTGCAGGACCAGCAGTCCAGCAGCAGCGATGATGAGGAAAAG
GAACAACCGAAGAAGAAGCGAAAGAAGCTGTCAGTTGCGGAGAAGCTAGCCAAGGCGCGG
GAGGAAGAGGAACGTCTCCGGGAAATGGAGAAAAGAGCAATAGAGAGTGACGCCCAGCCG
CGCTCCGCCGACCACTTCCAACGAGCACTCCTCGCCAACCCCTCCGCCAGCCAACTGTGG
ATAGCCTACATGGCGTTCCACTTGCAGGCTACTGAGATAGAGAAGGCCCGTGCCGTGGCC
AGGAAGGCGCTCAGTACAATTTGTTTCCGTGAAGAAGATGAGAAGTTGAACGTGTGGCTG
GCACTCATCAACCTCGAGAACAGATTCGGCACTAAGGAGTCTCAACAGAAGACTTTAGAG
GAAGCTTTGCAGATGAACGACACTTTCAAAGTCCACTCCAAGCTGCTGGACATATATGTG
GACACTGGCAAGCAGCAGGAACTCTCCGCGCTCGTCGACCTCATGCTAAGGAAATACAAA
AAGGATCCAAAAACCTATACGCTGTGCGGGACAGCCTGCTACAAACTGAATCTCAAAGAG
AAAGCGAGATACGTTATGCAGAAAGCCTTGAACGTTTTGGAGAAGAAAGAACATGTACAA
GTGTTGGTGCAGTTCGCCCTGCTAGAGCGAGACCGCGGCGAGCGAGAGCGCGCTGAAGCC
TTACTCGAACAAGTGCTCGCTGTTTACCCGCAACGCGTCGACGTGTGTGCCGTGTACGTC
GATATGCTCGTTAAGGAAAACGATATCGAACGCGTTAGACAAGTTATGGAACGCATCACG
TCCCATCAGTTGCCAGCTAGAAAAATGAAAGTGCTCTATAAAAAATGGATTGAAGTCGAA
GAGAAGATCGGTGATGAAGGGAAAGCGGAGATAATCCGACAGCGCGCCATAGAATATGTA
GAAAAAGCAAAGTTCTAA
(3018 bp)

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