SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA000626-TA
JBrowseBomo_Chr1
chromosome_No.
Scaffold_id
Scaffold Length		chromo1
Bm_scaf8
8002931 bp
UniRef
UniRef50_Q8T0Z8 (88%/413)
Cluster: PM-Scl autoantigen-like protein; n=1; Bombyx mori|Rep: PM-Scl autoantigen-like protein - Bombyx mori (Silk moth)
Ontology
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0006139 P nucleobase-containing compound metabolic process
GO:0008408 F 3'-5' exonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
Orthologue
Sequence
(Amino Acid)
MSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDS
LLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIPR
PQLTFKDTIDNSENLWVPKISDKPNNIKPLALNILYTEKGEAVGYEHPYQMELDMYNPPS
QFIDPDPEPPMFPPPLEETKFTYIDIESKLDELVEHLMAVEQIAVDVEHHSYRTYQGITC
LIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVGL
FDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLY
VWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCASTYNKEVIHDESHIPLYIRSKKNFDNQQ
MAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPFVKQNV
ITIHRMILSCRELPKDAQIFHIPSGIRNMMNAGIEQIHYEMHDLDHEAEYREEQKSNVEQ
VNYCLTVTTKITSKFNPEVEAFIPASMMFPEGTIEEIAKDIKEMEAKVAAISQGNELIEE
EVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNE
HVPKKIDVAKKEVTAGYQYQNATYDKFYNVTNNTKQIKGKKSKKQNVND
(709 a.a.)
Sequence
(Nucleotide)
ATGAGCTCTTCGTATGATTTATTTAAAACATATCCAGAATTTAATGAAATTTCAAATCAG
ATCAGCCAAAATGTTGCTCAACAGTCAAACGAACTGATTGGCACTGAACAACCGGCCGTG
AAGCTGAAGTGTGAGGATTTCACAAGCAACATAGAGAAACTTGCTGATGTAAACGACAGC
TTATTGGACAGGATTAATATTAGCATTGATACAGTGAGCGGTGAGAACTTACCCAGTGAG
GCATTCGCGAGCGGTCTCAATGATAATCCTTCTCATAACTCATCGCCTTGGAATAAGCCT
GTCATTTCTGAAAAGAAGATGGGATCAACTATATTCATCGGAGCTAAAAACATTCCGCGT
CCACAGCTTACTTTCAAGGATACAATTGATAATTCTGAGAATTTGTGGGTGCCCAAAATT
TCAGACAAACCAAACAACATCAAGCCTTTGGCTTTAAACATTTTGTATACCGAGAAGGGC
GAAGCTGTTGGATATGAGCATCCATACCAAATGGAGTTGGACATGTATAACCCTCCGTCG
CAGTTCATCGATCCCGATCCGGAGCCTCCCATGTTTCCACCCCCTCTGGAGGAAACGAAA
TTCACTTACATAGATATAGAATCGAAGCTAGACGAGTTGGTTGAACACCTTATGGCCGTC
GAACAAATTGCTGTAGATGTAGAACATCATTCCTATAGGACCTATCAGGGCATAACGTGC
CTCATTCAAATATCAACTGATGAAGGAGGAGACTTTATCATTGACGCTCTCGCTGTAAGG
GAACACATACATAAACTGAATGTCGTCTTCACTGACCCCAAGAAACTAAAGGTGTTCCAC
GGTGCCGATAGCGATGTTCTTTGGCTTCAACGTGATTTCGGCGTGTATTTGGTGGGTCTT
TTCGACACATACCACGCAGCCAAGTCACTAGGTCTGCCCGCGCTTTCGCTCAAATTTCTT
TTGATGAAGTATTGCGGCGTTGACACCGATAAAACGTATCGTCTGGCGGACTGGCGCATT
CGTCCGCTTCCGGACGTGTTGATCAAGTACGCTCGCATGGATACGCACTATCTTTTGTAC
GTTTGGCGCGTTATGAAGAATCAAATAATCGAGAAGAATGCTGGACAAACGAATATGCTA
CTGTCGGTCTTCGAGGACAGCCGTCAGACTTGCGCCTCTACATACAATAAAGAGGTGATT
CACGACGAGAGCCACATACCATTATACATACGTTCGAAGAAGAATTTCGATAATCAGCAA
ATGGCGGCTCTTAAGATGCTCTACAAATGGAGAGACTCGCAGGCGCGGCAACTGGACGAA
AGCACCACGTACCTTCTGCCGAACCACATGCTGCTGTCGCTCTCCGAGAATCTGCCGCGC
GAGCTACAAGGCGTCAACGCTTGCTGCGATCCGATGCCGCCATTCGTCAAACAGAATGTG
ATAACCATCCATCGTATGATCTTATCGTGTCGCGAATTGCCGAAGGACGCTCAGATATTC
CACATACCGTCCGGCATAAGGAACATGATGAACGCCGGGATAGAGCAAATACATTATGAA
ATGCACGACCTCGATCACGAAGCGGAATATCGCGAGGAACAGAAGTCGAATGTCGAACAA
GTTAATTACTGTCTAACCGTCACCACCAAAATTACTTCGAAGTTTAATCCCGAAGTCGAG
GCCTTTATACCGGCATCAATGATGTTTCCAGAAGGGACCATTGAGGAAATAGCCAAAGAT
ATCAAAGAAATGGAAGCCAAAGTGGCGGCCATCAGTCAGGGAAACGAGCTGATCGAGGAG
GAGGTTCTGCAGAAGCTGCAAAAGGCGCAGTCGCACATCGAGCACGATAAGACGAGTGTC
GCTCCTCAAGCCGCCGCCGCTAATGACACCGAGCCCGATACGAAAACGGCCCAACGGAAA
CGAAAAATCGTCACCGAAAACGCAGAGGAACAAAATGTAGGGCGGGCCCACAAAAACGAA
CATGTTCCGAAAAAAATAGATGTCGCGAAAAAGGAGGTCACCGCCGGTTACCAATACCAG
AACGCGACCTACGACAAGTTCTACAACGTAACCAACAATACTAAGCAGATAAAGGGCAAA
AAGTCGAAGAAACAAAACGTGAACGATTAA
(2130 bp)

- SilkBase 1999-2023 -