SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA000449-TA
JBrowseBomo_Chr22
chromosome_No.
Scaffold_id
Scaffold Length		chromo22
Bm_scaf18
5904300 bp
UniRef
UniRef50_O77156 (63%/33)
Cluster: GATA transcription factor; n=1; Strongylocentrotus purpuratus|Rep: GATA transcription factor - Strongylocentrotus purpuratus (Purple sea urchin)
Ontology
GO:0003700 F DNA-binding transcription factor activity
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
Orthologue
Sequence
(Amino Acid)
LSAGRTLSGSSGQVCRPHFHTPLHPWLESKALGSGAWGGGFQQDGSSGDKPLSPAQHPHP
HPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMM
GAPPSKQREGAQPDSCAQDTSQPSGEYNAQYNAAGGDYYNYQGKGYSGAQQQNKPRPNKT
RTSAEASVHRRGIVDHLPKDSSFAE
(205 a.a.)
Sequence
(Nucleotide)
TTGTCCGCAGGTCGAACGTTAAGCGGTAGCAGTGGGCAGGTGTGTCGGCCTCACTTCCAT
ACGCCTCTGCATCCTTGGCTCGAGTCTAAGGCGCTGGGGAGCGGGGCGTGGGGAGGAGGC
TTCCAACAAGATGGTTCCTCGGGCGACAAACCGCTGTCACCAGCACAACACCCTCATCCC
CATCCTTTGTTTTCATTTCCTCCGACTCCTCCGAAAGACTCGACGCCGGACTCTGTGGCT
GCGGCGGCTCTCGGTCAACAGGACTACCAGGCCGCGGTAGCGCATGCCACAGCGATGAGC
GTCGCCTTCATGCAGCAACAACAAGAGCTGCCCCTCTGCGGAGACGTCAAACCAATGATG
GGCGCGCCGCCTTCCAAACAGCGCGAAGGTGCGCAACCGGACTCTTGCGCCCAGGACACG
AGTCAACCCTCCGGGGAATACAACGCTCAGTACAATGCCGCCGGCGGCGACTACTACAAC
TATCAGGGGAAAGGTTATAGCGGAGCGCAGCAGCAGAACAAGCCGCGACCGAACAAGACG
CGAACTAGCGCCGAAGCATCTGTTCACAGAAGGGGTATAGTGGATCACTTACCTAAAGAT
AGTTCGTTCGCTGAATGA
(618 bp)

- SilkBase 1999-2023 -