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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA000414-TA
JBrowseBomo_Chr22
chromosome_No.
Scaffold_id
Scaffold Length		chromo22
Bm_scaf18
5904300 bp
UniRef
UniRef50_Q1RPX0 (28%/238)
Cluster: Zinc finger protein; n=1; Ciona intestinalis|Rep: Zinc finger protein - Ciona intestinalis (Transparent sea squirt)
Ontology
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
Orthologue
Sequence
(Amino Acid)
MSAAIATSERRIITSAIATLIYQDQSYLENGIAFDDLIKAASDQESKYSKKQLENIVNKE
LSSGSLVKLPNGNLALGPADHDVDSSDSFRFESNADSNTKMTSSANSSCRSSPQRTRGRP
KKRGGGVSGGHSNNTTRSTAVRVGERRKMAKKVFDPSDNNVPSKRKRGRPVGSLNKSTIK
KRLMVAGHIKDDAPLSESQFSLDGSGDEIDQEDSLPHEESGGVCSVCLVQKPRGSNDRLV
ECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCKTCVICCETNDAGVLTVCSVCSDAYH
ALCHAPQIPDRLKAWDQWECNNCLESRPTVIGSPAIIPRSFDYSGQNSPNVDPFLKPHEL
DRAPSKLSMDTPIDPSIPDITHWNTDDVFEYFSKHHPEAAPILRDQEFDAQALSMACRAD
IVRGLGLPLGPALALYRIVLKLQTRKDDWTMCWG
(454 a.a.)
Sequence
(Nucleotide)
ATGTCTGCTGCAATTGCAACAAGTGAACGCCGAATTATAACATCGGCTATAGCAACACTT
ATCTACCAAGATCAAAGTTATTTAGAAAATGGAATTGCCTTTGATGACCTTATAAAAGCT
GCTTCTGATCAGGAATCAAAGTACTCCAAAAAACAATTGGAGAATATTGTAAACAAAGAA
TTAAGCTCTGGTAGTTTAGTGAAATTACCAAATGGTAATTTAGCTTTGGGACCAGCAGAC
CATGATGTAGATAGCTCTGATAGTTTTAGATTTGAGAGTAATGCAGATTCCAATACGAAA
ATGACGTCCTCAGCTAATTCTTCATGCAGATCATCTCCACAAAGAACTAGAGGACGGCCT
AAAAAACGTGGTGGAGGTGTTTCTGGTGGGCATAGTAATAATACAACTCGCAGCACTGCA
GTACGTGTAGGAGAACGACGAAAAATGGCAAAAAAAGTATTTGATCCATCAGATAACAAT
GTGCCGAGCAAAAGAAAAAGGGGTCGTCCTGTGGGGTCCTTGAACAAGAGCACAATAAAA
AAAAGATTGATGGTGGCTGGACATATTAAGGATGATGCACCATTATCAGAAAGCCAATTT
TCTTTGGATGGAAGTGGTGATGAAATAGACCAGGAAGATTCTTTGCCGCATGAAGAATCA
GGTGGAGTTTGCTCAGTTTGCCTTGTACAAAAACCACGAGGATCAAATGATAGACTTGTT
GAATGCCGTGATTGCAGCAACAAAGCTCATATAAGCTGTTTGCAATCAGGTTCCAATATT
TTAAAACCAAGGCCTGACAACACATGGCAATGTCCTCATTGTAAAACATGTGTAATATGC
TGTGAAACTAATGATGCTGGTGTTCTCACTGTCTGCAGTGTTTGCTCTGATGCTTATCAT
GCACTTTGCCATGCACCTCAGATACCAGATAGATTGAAAGCTTGGGATCAATGGGAATGC
AATAATTGCCTTGAATCTCGACCAACTGTGATAGGGTCACCCGCCATAATACCCAGAAGC
TTTGACTACAGTGGACAAAATTCACCAAATGTTGATCCTTTCTTGAAGCCACATGAACTA
GATAGAGCACCATCCAAATTATCTATGGATACACCAATAGATCCAAGCATACCTGACATA
ACACATTGGAATACTGATGATGTTTTTGAGTACTTTTCAAAGCATCATCCTGAAGCTGCC
CCTATTCTCAGAGATCAGGAATTTGATGCCCAAGCTTTAAGTATGGCATGTCGTGCTGAC
ATTGTAAGGGGTCTGGGGTTACCTCTTGGACCTGCCCTGGCATTATATCGTATTGTGTTG
AAACTACAAACAAGGAAGGATGATTGGACAATGTGTTGGGGCTAA
(1365 bp)

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