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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA000388-TA
JBrowseBomo_Chr22
chromosome_No.
Scaffold_id
Scaffold Length		chromo22
Bm_scaf18
5904300 bp
UniRef
UniRef50_Q17208 (90%/174)
Cluster: Collagen; n=2; Coelomata|Rep: Collagen - Bombyx mori (Silk moth)
Ontology
GO:0005737 C cytoplasm
GO:0006817 P phosphate ion transport
GO:0045735 F nutrient reservoir activity
GO:0042302 F structural constituent of cuticle
Orthologue
Sequence
(Amino Acid)
MTQLDASRINIADKQPSHLTAVLALSLVSADKPKTETTSTTAKKATEVPAKKTVEVPLKK
ASEVPVKKASEVPTKKPHVEPAREGRQLSPYPGQQDNEVVVDIQDDEKKQYYETNYDTSA
YGFGYDVGPNGQFHHENRGPDGVVYGCYGYVDTEGYLRATHYVADSHGYRVVEPEKPVEV
FPDEKYEYDENYEPTPSATGQTIPWNKLFFPQGCGRTPGGVPPQPFKPKPKPKPPVDSTG
QTSNPSPGVAYPGQGPNGPYGPGGSGGSGGPGGPGGPNGPYGPGGPGGPNGPYGPGGTGG
PNGPYGPGGQDGSYRPDGSYGPDGSYQPEGSYGPDGSWQGGYYPGTPGSPGTPGSPGSPG
SPGSPGTPGSPGTPGTPGSGGGYYPGQDGTGGPTGPSGGGGGYYPGSPGSPGTPGTPGTP
GTPGGPGGPGGPGGPGGPGGPNGPNGPGGSDGGQYYPALPGSPGTPGSPGTPGGPGGPGG
PGGPGGPGGPGGPGGPDQPSYPGQPGQPGTPGYPGQPGYPGQPGTPGQPGTPGQPGYPGQ
GGQPINPGQPGYPGQPGQPGYPGQPGQPGTPGQPGTPGQPGTPGQPGQPGYPGTPGQPGQ
SGYPGQGGPQQGGYPGQPGQPGYPGQPGQPGTPGQPGTPGQPGTPGQPGTPGQPGQPGYP
GQAGQPVNPAQPGYPGQPGQPGYPGQPGQPGTPGQPGTPGQPGTPGQPGQPGYPGQAGQP
VNPAQPGYPGQPSQPGYPGQPGQPGTPGQPGTPGQPGQPGTPGQPGQPGYPGQGGQPIKP
GQTGYPGQPGQPGYPGQPGQPGTPGQPGTPGQPGQPGYPGQGGQPIKPGQTGYPGQPGQP
GYPGQPGQPGTPGQPGQPGQPGTPGQPGTPGQPGQPGYPGQGGQPVNPAQPGYPGQPGQP
GYPGQPGQPGTPGQPGTPGQPGTPGQPGQPGYPGQGGQPVNPAQPGYPGQPSQPGYPGQL
GQPGTPGQPGQPGTPGQPGTPGQPGQPGYPGQGGQPINPTQPGSPGQLGQPGYPGQPGQP
AGQPGYPGQGGQQQGGQPINPSQPGYPSHPGQPGYPGQPGQPGQPGQPGTPGQPGQPGYP
GQGGQPIKPGQPGYPGQPGQPGYPGQPGQPGAPGQPGQPGQPVQPGTPGQAGQPGYPGQG
GQPIKPAQPGHPGQPGQPGQPGTPGQPGQPGYPGQPGQPGQPGQPGQQGYPGQGGPQQGG
QPINPSQPGYPGQSGQPGYPGQPVQPGQPGQPGTPGEPGQPGTPGQPGYPGQGGPQQGGQ
PMNPSQPEYPSQPGQPGQPGTPGQAGHPGQPGHPGAPGQPGYPGQPGQTGAPGQAGYPGQ
GGPQQGGQPINPSQPGHPVQPGQPGQPGQPGKPGQPGTPGQPGAPGQPGTPGQPGYPGQN
GPQQGGQPGQPGTPGQPGYPGQGGPQQGGQPINPDQPGQPGPPGYPGQGGQPINPSQSGY
PGQPGQGGDSVSSGTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNG
TATNEMQASSHPANGQSQGYAPYGIIGFIPVVFVPYCPGNGSAMNTAQQNFPQAVPVQYN
CAQCQANRDVYRFAGRNNGARAFKELKELKSLDELNDLIRNRIKPTTRTLRQIAAHPKIL
ETKH
(1624 a.a.)
Sequence
(Nucleotide)
ATGACGCAATTGGATGCATCTCGCATAAACATCGCGGATAAACAACCCAGTCACTTGACG
GCGGTGCTAGCATTGTCACTGGTTAGCGCCGATAAGCCAAAAACTGAGACAACTTCAACG
ACCGCGAAAAAGGCAACTGAAGTACCCGCGAAGAAGACAGTCGAAGTACCTTTGAAGAAG
GCATCTGAAGTGCCCGTGAAGAAGGCATCAGAAGTGCCAACAAAGAAGCCCCATGTAGAA
CCCGCGCGTGAAGGAAGGCAGTTGAGTCCTTACCCTGGACAACAAGACAACGAAGTGGTG
GTCGACATTCAGGACGACGAAAAGAAGCAGTACTACGAAACCAACTATGACACAAGTGCG
TATGGTTTCGGATACGATGTCGGCCCAAACGGACAGTTTCATCACGAGAACCGCGGTCCC
GATGGTGTCGTCTACGGATGTTATGGTTACGTCGACACCGAGGGCTACCTCCGCGCCACC
CACTACGTTGCCGACAGCCACGGCTACCGAGTCGTAGAACCAGAAAAACCTGTCGAAGTT
TTCCCCGATGAGAAATACGAATATGACGAAAATTACGAACCCACGCCATCCGCGACGGGT
CAAACCATTCCGTGGAATAAGTTATTCTTCCCCCAGGGATGCGGTCGCACTCCTGGCGGA
GTTCCACCCCAACCGTTCAAACCAAAACCTAAACCTAAACCCCCTGTAGATAGCACCGGA
CAAACTAGCAACCCCAGTCCTGGCGTCGCATACCCTGGTCAAGGCCCTAATGGCCCTTAC
GGTCCTGGCGGCTCCGGCGGCTCCGGCGGCCCTGGTGGTCCCGGAGGACCAAATGGACCT
TACGGACCTGGTGGTCCCGGAGGACCAAATGGACCTTACGGACCCGGCGGTACTGGCGGA
CCTAATGGTCCTTATGGCCCAGGTGGTCAAGATGGCTCATACAGACCAGACGGCTCCTAC
GGTCCAGACGGATCTTATCAACCGGAAGGTTCCTACGGACCCGACGGATCATGGCAAGGT
GGTTACTATCCTGGCACTCCTGGATCGCCTGGAACTCCTGGGTCGCCTGGCAGCCCTGGA
TCCCCTGGTAGCCCGGGTACTCCTGGTTCTCCAGGCACACCAGGAACACCTGGTTCAGGC
GGTGGATACTATCCTGGACAAGACGGAACAGGGGGACCGACTGGTCCTTCAGGCGGGGGA
GGTGGCTACTATCCAGGTAGTCCCGGCAGTCCTGGAACCCCCGGCACTCCAGGCACACCC
GGAACACCAGGTGGCCCTGGGGGTCCAGGTGGACCAGGTGGACCAGGTGGTCCAGGAGGG
CCAAACGGTCCAAATGGGCCTGGAGGATCTGACGGCGGTCAATATTATCCTGCACTGCCC
GGTAGTCCCGGTACACCCGGCTCCCCAGGCACTCCTGGTGGACCTGGTGGACCTGGTGGT
CCCGGAGGCCCTGGGGGACCAGGCGGCCCAGGCGGCCCGGGAGGTCCAGATCAACCAAGC
TACCCTGGACAGCCAGGACAGCCTGGTACACCAGGATATCCAGGACAACCAGGATACCCA
GGACAACCCGGTACACCAGGACAACCAGGAACACCAGGCCAGCCAGGCTATCCAGGACAA
GGTGGACAACCTATAAATCCTGGTCAACCAGGATACCCAGGCCAGCCCGGACAACCAGGA
TACCCGGGACAACCAGGTCAGCCAGGAACACCAGGACAACCCGGAACGCCTGGACAACCA
GGAACGCCAGGACAACCAGGACAACCCGGCTATCCAGGAACTCCTGGGCAACCAGGGCAA
TCCGGATATCCAGGACAGGGTGGACCACAACAGGGAGGATACCCAGGTCAGCCAGGCCAG
CCGGGATACCCAGGACAACCAGGACAGCCAGGAACACCAGGACAGCCAGGAACACCAGGA
CAGCCAGGAACACCAGGCCAGCCAGGAACACCAGGACAACCAGGTCAACCAGGCTACCCA
GGACAAGCTGGACAGCCTGTAAATCCTGCTCAGCCGGGATACCCAGGACAGCCAGGTCAG
CCAGGATACCCAGGACAACCAGGACAGCCAGGAACTCCAGGACAGCCAGGAACACCAGGA
CAGCCCGGAACACCAGGACAACCAGGTCAACCAGGCTACCCAGGACAAGCTGGACAGCCT
GTAAATCCTGCTCAGCCGGGATACCCAGGTCAGCCAAGTCAGCCGGGATACCCAGGACAA
CCAGGACAGCCAGGAACACCAGGACAGCCAGGAACACCAGGACAACCAGGGCAGCCCGGA
ACACCAGGACAACCAGGTCAACCAGGCTACCCAGGACAAGGTGGACAGCCTATAAAGCCT
GGTCAGACAGGATACCCAGGTCAGCCAGGCCAGCCGGGATACCCAGGACAACCAGGCCAG
CCAGGAACACCAGGACAGCCAGGAACACCAGGACAGCCAGGCCAACCAGGCTACCCAGGA
CAAGGTGGACAGCCTATAAAGCCTGGTCAGACAGGATACCCAGGTCAGCCAGGCCAGCCG
GGATACCCAGGACAACCAGGACAGCCAGGAACACCAGGACAGCCAGGCCAACCGGGACAA
CCCGGTACACCAGGCCAGCCCGGAACACCAGGACAACCAGGTCAACCAGGCTACCCAGGA
CAAGGTGGACAGCCTGTAAATCCTGCTCAGCCGGGATACCCAGGACAGCCAGGTCAGCCA
GGATACCCAGGACAACCAGGACAGCCAGGAACTCCAGGACAGCCAGGAACACCAGGACAG
CCCGGAACACCAGGACAACCAGGTCAACCAGGCTACCCAGGACAAGGTGGACAGCCTGTA
AATCCTGCTCAGCCGGGATACCCAGGTCAGCCAAGTCAGCCGGGATACCCAGGACAACTA
GGACAACCAGGAACTCCAGGACAACCAGGACAGCCCGGAACACCAGGACAGCCCGGAACA
CCAGGACAACCAGGTCAACCAGGCTACCCAGGACAAGGTGGACAGCCTATAAATCCTACT
CAGCCGGGATCCCCAGGTCAGCTAGGTCAGCCAGGATACCCAGGACAACCAGGACAGCCA
GCAGGACAACCAGGCTATCCCGGACAAGGTGGACAACAACAGGGCGGTCAGCCCATTAAT
CCTAGTCAACCTGGATACCCCAGCCATCCAGGACAACCAGGATACCCAGGACAACCAGGT
CAACCAGGACAACCAGGCCAGCCCGGAACACCAGGACAACCAGGTCAACCAGGCTACCCA
GGACAAGGTGGACAGCCTATAAAGCCTGGTCAGCCAGGATACCCAGGTCAGCCAGGCCAG
CCGGGATACCCTGGACAACCAGGACAGCCAGGAGCACCAGGCCAACCGGGTCAGCCAGGA
CAACCAGTGCAGCCCGGAACACCAGGACAAGCAGGTCAACCAGGCTACCCAGGACAAGGT
GGACAACCTATAAAGCCTGCTCAGCCGGGACACCCAGGCCAGCCTGGACAACCAGGGCAG
CCCGGAACACCAGGACAACCAGGTCAACCAGGATACCCAGGGCAACCGGGTCAGCCAGGA
CAACCAGGGCAACCAGGACAACAAGGCTATCCAGGACAAGGTGGACCACAACAGGGCGGT
CAGCCTATTAATCCTAGTCAACCTGGTTACCCAGGCCAGTCAGGACAACCAGGTTACCCT
GGACAACCGGTTCAGCCAGGACAACCAGGGCAGCCCGGAACACCAGGGGAACCGGGACAG
CCCGGTACACCAGGACAACCTGGCTATCCAGGACAAGGTGGACCACAACAGGGCGGTCAG
CCTATGAATCCTAGTCAACCCGAATACCCAAGCCAGCCAGGACAACCAGGACAGCCAGGA
ACACCGGGACAAGCAGGACACCCAGGACAACCTGGACACCCAGGCGCACCAGGACAACCA
GGTTACCCAGGACAACCCGGACAGACGGGCGCACCAGGACAAGCAGGTTACCCAGGACAA
GGTGGACCGCAACAGGGCGGTCAGCCTATAAATCCTAGTCAACCAGGACATCCAGTGCAG
CCAGGACAGCCGGGTCAACCAGGGCAGCCAGGAAAACCCGGGCAACCTGGTACACCAGGG
CAGCCTGGAGCTCCAGGGCAACCTGGAACACCAGGACAACCAGGCTATCCAGGACAAAAT
GGACCACAACAAGGCGGACAACCCGGACAGCCAGGAACACCAGGACAACCCGGATATCCA
GGACAAGGCGGACCACAACAGGGCGGTCAGCCTATCAATCCCGATCAGCCCGGACAGCCA
GGTCCACCAGGATATCCAGGGCAAGGCGGACAACCCATAAATCCTAGTCAATCAGGCTAC
CCGGGACAACCAGGACAAGGAGGCGATTCCGTCTCGTCGGGAACTGGTGTGCAGCCACCG
ACATATGTTCCATCAACTCAAATGCCACCTTTCCCAATTTATGTCATACCTTTTCCATTG
CCTATCGTACCAAGTCCAGGATCATGTCCCTGCTATTTATTAAATCCTGGAAATAACGGT
ACAGCAACGAACGAAATGCAAGCATCCTCACATCCCGCAAATGGACAGAGTCAAGGATAT
GCTCCGTACGGTATTATAGGATTCATACCTGTTGTTTTCGTTCCCTATTGTCCAGGAAAT
GGGAGTGCGATGAACACTGCACAACAAAACTTCCCTCAAGCAGTACCGGTGCAATACAAT
TGTGCCCAATGTCAGGCCAATCGAGATGTCTACAGATTCGCAGGCCGAAACAATGGCGCC
AGAGCGTTCAAAGAGCTTAAAGAACTTAAATCGCTGGACGAACTTAACGATCTCATTCGA
AATAGAATAAAACCTACCACGAGGACATTACGTCAAATTGCAGCACATCCAAAAATACTT
GAAACAAAACACTAG
(4875 bp)

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