Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000058-TA|BGIBMGA000058-PA|undefined
(305 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53823| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_26925| Best HMM Match : DUF1447 (HMM E-Value=0.91) 52 4e-07
SB_50259| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 8e-07
SB_28309| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_36931| Best HMM Match : FabA (HMM E-Value=5.5) 50 3e-06
SB_19826| Best HMM Match : DUF889 (HMM E-Value=0.053) 47 2e-05
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3) 42 5e-04
SB_54616| Best HMM Match : zf-AD (HMM E-Value=0.038) 42 6e-04
SB_28626| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_36343| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_19506| Best HMM Match : Viral_helicase1 (HMM E-Value=2.7) 39 0.004
SB_50552| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00012) 38 0.008
SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19) 37 0.018
SB_48260| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.024
SB_11635| Best HMM Match : Borrelia_P13 (HMM E-Value=9.9) 37 0.024
SB_55122| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_10124| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_40864| Best HMM Match : Pox_G5 (HMM E-Value=0.48) 34 0.13
SB_3007| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 30 2.7
SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
>SB_53823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
RR LPL L+WA ++HK QG T+D + L +++FE GQAYVALSR +SL+GL
Sbjct: 525 RRQLPLKLAWAVSIHKSQGMTLDCLEISL-ARVFEFGQAYVALSRARSLQGL 575
>SB_26925| Best HMM Match : DUF1447 (HMM E-Value=0.91)
Length = 364
Score = 52.4 bits (120), Expect = 4e-07
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 58 SIPDEIQALTQAEQRLLCRIIPLVKIVKFTGLYGQYGFRGQDIFEVSERLPNMLPRSSSQ 117
++ DE+++LT AEQ L+ R+ P V + +G +R + + + +LPR +
Sbjct: 27 TVSDELKSLTDAEQMLIARLAPTVHVHLLK--HGGPLYR---LSQAVQEPATILPRLPAD 81
Query: 118 VGIVVVTECLENLNITREFTISREKFYSALRWLTRNNPLYRDVRID 163
V I+ V + + ++F + R + SAL WL +NNP+Y D ID
Sbjct: 82 VDIIRVRRKGKE-DTHKDFRVRRRRVESALYWLQQNNPVYADETID 126
>SB_50259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 51.6 bits (118), Expect = 8e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 247 GTAERRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSL 299
G ER+ LP L+W+ T+HK QG T+ A V +G G +YVALSRVK+L
Sbjct: 415 GLHERQQLPRKLAWSLTIHKSQGLTLPKAWVDIGKSEKTPGISYVALSRVKAL 467
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 98 QDIFEVSERLPN--MLPRSSSQVGIVVVTECLENLNITREFTISREKFYSALRWLTRNNP 155
++++ + ER N + R V I+VV + N + T+ +++ AL WL NNP
Sbjct: 97 KEVWPLKERKTNSYICSRYPKDVSIIVV-KVKGRENTFKGVTVRKQRVQDALFWLKNNNP 155
Query: 156 LYRDVRIDENVQ--ISEQDLIRLSVPDIPENGEPERIEIPN 194
Y DV ID + E D+ V P+NG+ ++I +P+
Sbjct: 156 HYADVTIDIKALSCLPENDVPLDLVTINPDNGDFQQINMPD 196
>SB_28309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 237 AIQFPAKFNYGTAERRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRV 296
+I A G ER+ LP L+W+ T+HK +G T+ A V +G G +Y ALSRV
Sbjct: 327 SITVSAHLEDGLYERQQLPFKLAWSLTIHKSEGITLPKAWVDIGKSEKTPGISYAALSRV 386
Query: 297 KSL 299
K+L
Sbjct: 387 KAL 389
>SB_36931| Best HMM Match : FabA (HMM E-Value=5.5)
Length = 702
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 245 NYGTAERRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
N T +R +LP+VL +A T+ K QG T+ +V++ S YVALSRV+ LE +
Sbjct: 627 NNVTFKRTVLPVVLGYAITICKAQGQTLHKCIVWMDSDFVPAASGYVALSRVRKLESI 684
>SB_19826| Best HMM Match : DUF889 (HMM E-Value=0.053)
Length = 203
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 249 AERRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSR 295
A R +PL +WA T+HK QG ++D V L +F +GQAYVALSR
Sbjct: 156 ARRVQIPLKPAWAITIHKSQGMSIDLLQVDL-RNVFAQGQAYVALSR 201
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVK 297
RR P+ LSWA TVH+ QG T+D VV S+ F G YV LSRV+
Sbjct: 837 RRQFPIQLSWAITVHEAQGLTLD-KVVLTCSREFVFGLTYVGLSRVR 882
>SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3)
Length = 308
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 110 MLPRSSSQVGIVVVT-ECLENLNITREFTISREKFYSALRWLTRNNPLYRDVRID 163
+LPR + V I+ V + +E+ N +EF + R + AL WL +NNP+Y DV ID
Sbjct: 224 ILPRLPADVDIIRVRRKGMEDTN--KEFRVRRRRVERALYWLQQNNPVYADVTID 276
>SB_54616| Best HMM Match : zf-AD (HMM E-Value=0.038)
Length = 607
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 30 LCSRCQTHVTSNKTIAPSKAYWNNLDPGSIPDEIQALTQAEQRLLCRIIPLVKI 83
+C+RC+ +K + + N++DPG +P+E++ +T AEQ L+ R+ P + +
Sbjct: 508 ICTRCKR----DKGVPKMWSAENHMDPGVLPEELKGMTDAEQMLIARLAPTIHV 557
>SB_28626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVD------HAVVYLGSKLFEE---GQAYVALSRVKSLEG 301
R +PL L+W T+HK QG TV + V++ G FE G +VALSR KS G
Sbjct: 912 RVQVPLRLAWGMTIHKCQGMTVGEGEPFRYVVIHPGKYAFESKNPGALFVALSRAKSAGG 971
>SB_36343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVD------HAVVYLGSKLFE---EGQAYVALSRVKSLEG 301
R +PL L+W T+HK QG TV + V++ G FE +G +VALSR K+ G
Sbjct: 167 RVQVPLRLAWGMTIHKCQGMTVGEGEPLRYVVIHPGKYAFEAKNQGALFVALSRAKTAGG 226
>SB_19506| Best HMM Match : Viral_helicase1 (HMM E-Value=2.7)
Length = 828
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVD------HAVVYLGSKLFE---EGQAYVALSRVKSLEG 301
R +PL L+W T+HK QG TV + V++ G FE G +VALSR KS G
Sbjct: 705 RVQVPLRLAWGMTIHKCQGMTVGEGEPFRYVVIHPGKYAFEAKNPGALFVALSRAKSAGG 764
>SB_50552| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00012)
Length = 966
Score = 38.3 bits (85), Expect = 0.008
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
R+ PL A T+H+ QG T VV +K + YV LSRV +++GL
Sbjct: 654 RKQFPLRPDAAKTIHRSQGDTESRIVVNFETKRAIPHKHYVGLSRVTTIDGL 705
>SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19)
Length = 2253
Score = 37.1 bits (82), Expect = 0.018
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
R+ PL + A T+H+ QG T VV +K YV LSRV +++GL
Sbjct: 136 RKQFPLRPAAAKTIHRSQGDTESRIVVNFETKRAIPHIHYVGLSRVTTIDGL 187
>SB_48260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 36.7 bits (81), Expect = 0.024
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 247 GTAERRMLPLVLSWASTVHKKQGSTVDHAVVYLG 280
G ER LPL L+W T+HK QG T A + +G
Sbjct: 142 GIHERHQLPLKLAWPITIHKSQGLTFSKAWIDIG 175
>SB_11635| Best HMM Match : Borrelia_P13 (HMM E-Value=9.9)
Length = 295
Score = 36.7 bits (81), Expect = 0.024
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
R+ PL + A T+H+ QG T VV +K Y+ LSRV +++GL
Sbjct: 136 RKQFPLRPAAAKTIHRSQGDTESRIVVNFETKRAIPHIHYIGLSRVTTIDGL 187
>SB_55122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 36.3 bits (80), Expect = 0.031
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
R+ PL + A T+H+ QG T VV +K YV LSRV +++GL
Sbjct: 136 RKQFPLRPAAAKTIHRSQGDTESRIVVNFETKRAIPHIHYVGLSRVITIDGL 187
>SB_10124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 36.3 bits (80), Expect = 0.031
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 251 RRMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
R+ PL + A T+H+ QG T VV +K YV LSRV +++GL
Sbjct: 229 RKQFPLRPAAAKTIHRSQGDTESRIVVNFETKRAIPHIHYVGLSRVITIDGL 280
>SB_40864| Best HMM Match : Pox_G5 (HMM E-Value=0.48)
Length = 518
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 252 RMLPLVLSWASTVHKKQGSTVDHAVVYLGSKLFEEGQAYVALSRVKSLEGL 302
R PL + A T+H+ QG+T+D AVV + + YV LSRV++ L
Sbjct: 248 RQFPLRPAAAKTIHRCQGNTLDSAVVDFPTST-RKHMHYVGLSRVRNHSNL 297
>SB_3007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 32.7 bits (71), Expect = 0.38
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 12/162 (7%)
Query: 4 TVDYRNEENAVLGYLPAELSSKTTLLLCSRCQTHVTSNKTIAPSKAYWNNLDPGSIPDE- 62
T R V+ YL ++S +C C ++ NK P A N + + PD+
Sbjct: 58 TTKLRQSNPDVVKYLSNKISVGNKEWVCRTCSNYLQKNKV--PPCAVANGM---AFPDKP 112
Query: 63 -IQALTQAEQRLLCRIIPLVKIVKFTGLYGQYGFRGQDIFEVSE--RLPNMLPRSSSQVG 119
L + E RLL I K+++ Q G + ++ N+LPR +Q
Sbjct: 113 YFFDLNELECRLLAPRIAFQKLMQ-APRERQLKIHGNIVNVPADVTNTVNILPRLQNQTA 171
Query: 120 IVVVT--ECLENLNITREFTISREKFYSALRWLTRNNPLYRD 159
+ V L+ + + K A WL ++ LYRD
Sbjct: 172 TIKVNLKRMLKYKSSALSLNVRPYKVLQAANWLITHSSLYRD 213
>SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 1258
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/31 (35%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 146 ALRWLTRNNPLYRDVRIDENVQISEQDLIRL 176
A++W +N+ ++RD++ EN+ IS+ D+++L
Sbjct: 137 AIKWCHQNDVIHRDIK-PENLLISKTDILKL 166
>SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 148 RWLTRNNPLYRDVRIDENVQISEQDLIRLSVPD 180
RW N +Y+ VR + + +DL RLSVPD
Sbjct: 861 RWKNYVNGVYKPVRTADGGGVRVKDLPRLSVPD 893
>SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1102
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 119 GIVVVTECLENLNITREFTISREKFYSALRWLTRNNPLYRDVRIDE 164
G +VV + L LN T EF + + SA+R T+N+P +R ++ E
Sbjct: 738 GSIVVNQGLP-LNCT-EFQDTARRIESAIREATKNDPNFRTAKVKE 781
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,203,626
Number of Sequences: 59808
Number of extensions: 420384
Number of successful extensions: 920
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 894
Number of HSP's gapped (non-prelim): 25
length of query: 305
length of database: 16,821,457
effective HSP length: 82
effective length of query: 223
effective length of database: 11,917,201
effective search space: 2657535823
effective search space used: 2657535823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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