GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005456-TA|BGIBMGA005456-PA|IPR010625|CHCH
         (103 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    19   9.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    19   9.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   9.3  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 19.4 bits (38), Expect = 9.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 43  RRREEVTQALPR 54
           R RE+VT+AL R
Sbjct: 434 RTREQVTEALRR 445


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 19.4 bits (38), Expect = 9.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 43  RRREEVTQALPR 54
           R RE+VT+AL R
Sbjct: 349 RTREQVTEALRR 360


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 9.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 43  RRREEVTQALPR 54
           R RE+VT+AL R
Sbjct: 668 RTREQVTEALRR 679


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.135    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,074
Number of Sequences: 429
Number of extensions: 833
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 103
length of database: 140,377
effective HSP length: 49
effective length of query: 54
effective length of database: 119,356
effective search space:  6445224
effective search space used:  6445224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)