SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005446-TA|BGIBMGA005446-PA|IPR008197|Whey acidic
protein, core region, IPR001450|4Fe-4S ferredoxin, iron-sulfur binding
         (119 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070573-1|AAL48044.1|  212|Drosophila melanogaster RE11751p pro...   112   1e-25
AE014298-2172|AAF48472.1|  212|Drosophila melanogaster CG15643-P...   112   1e-25
AY121644-1|AAM51971.1|  978|Drosophila melanogaster LD11689p pro...    31   0.30 
AJ289018-1|CAC17749.1|  978|Drosophila melanogaster calsyntenin-...    31   0.30 
AE014135-195|AAN06580.1|  978|Drosophila melanogaster CG11059-PB...    31   0.30 
AE014135-194|AAF59384.2|  978|Drosophila melanogaster CG11059-PA...    31   0.30 
AY119587-1|AAM50241.1| 1235|Drosophila melanogaster LD15137p pro...    30   0.91 
AY060966-1|AAL28514.1|  504|Drosophila melanogaster GM09639p pro...    30   0.91 
AE014298-1784|AAN09312.1| 1052|Drosophila melanogaster CG1848-PD...    30   0.91 
AE014298-1783|AAN09311.1| 1257|Drosophila melanogaster CG1848-PC...    30   0.91 
AE014298-1782|AAF48176.2| 1235|Drosophila melanogaster CG1848-PA...    30   0.91 
AB042818-1|BAB17234.1| 1257|Drosophila melanogaster LIM-kinase1 ...    30   0.91 
AB042816-1|BAB17233.1| 1235|Drosophila melanogaster LIM-kinase1 ...    30   0.91 
BT030286-1|ABN49425.1|  649|Drosophila melanogaster IP18554p pro...    28   2.8  
AE014296-2173|AAN11852.2|  510|Drosophila melanogaster CG32112-P...    28   3.7  
AE014134-92|AAN10495.1|  713|Drosophila melanogaster CG31921-PA ...    28   3.7  
AE014296-2172|AAN11851.2|  528|Drosophila melanogaster CG32112-P...    27   4.9  
AF132150-1|AAD34738.1|  313|Drosophila melanogaster unknown prot...    27   6.4  
AE014297-2628|AAF55637.1|  313|Drosophila melanogaster CG5629-PB...    27   6.4  
AE014297-2627|AAN13797.1|  313|Drosophila melanogaster CG5629-PA...    27   6.4  
AE013599-3452|AAF46893.1|  218|Drosophila melanogaster CG13519-P...    27   8.5  

>AY070573-1|AAL48044.1|  212|Drosophila melanogaster RE11751p
           protein.
          Length = 212

 Score =  112 bits (270), Expect = 1e-25
 Identities = 53/108 (49%), Positives = 69/108 (63%), Gaps = 2/108 (1%)

Query: 1   GYVCQRKDVTKNGCCDPEADFTERYXXXXXXXXXXXVE-YEHCVSCCLDPGKRDMLEIVL 59
           G+VC+R++V  NGCC+ E      Y              YE+CVSCCL PG++ +LE VL
Sbjct: 92  GFVCRREEVLTNGCCNLELPGIGYYSCRTCNTSTHCCGVYEYCVSCCLHPGQQPLLERVL 151

Query: 60  SKLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKDPTHKHCFG 107
              +T K I F S+TD +ELCL KCRT+S+SV HEN Y+DP  KHC+G
Sbjct: 152 QAPNTPKYI-FASVTDHFELCLVKCRTNSHSVEHENKYRDPAAKHCYG 198


>AE014298-2172|AAF48472.1|  212|Drosophila melanogaster CG15643-PA
           protein.
          Length = 212

 Score =  112 bits (270), Expect = 1e-25
 Identities = 53/108 (49%), Positives = 69/108 (63%), Gaps = 2/108 (1%)

Query: 1   GYVCQRKDVTKNGCCDPEADFTERYXXXXXXXXXXXVE-YEHCVSCCLDPGKRDMLEIVL 59
           G+VC+R++V  NGCC+ E      Y              YE+CVSCCL PG++ +LE VL
Sbjct: 92  GFVCRREEVLTNGCCNLELPGIGYYSCRTCNTSTHCCGVYEYCVSCCLHPGQQPLLERVL 151

Query: 60  SKLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKDPTHKHCFG 107
              +T K I F S+TD +ELCL KCRT+S+SV HEN Y+DP  KHC+G
Sbjct: 152 QAPNTPKYI-FASVTDHFELCLVKCRTNSHSVEHENKYRDPAAKHCYG 198


>AY121644-1|AAM51971.1|  978|Drosophila melanogaster LD11689p
           protein.
          Length = 978

 Score = 31.5 bits (68), Expect = 0.30
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 82  TKCRTSSYSVLHENSYKDP-THKHCFGDEPPGSH 114
           T+ +  SYS+LH N+ ++P +H H F  +  GSH
Sbjct: 843 TESKVYSYSLLHTNNVQEPKSHIHSFIHKAEGSH 876


>AJ289018-1|CAC17749.1|  978|Drosophila melanogaster calsyntenin-1
           protein protein.
          Length = 978

 Score = 31.5 bits (68), Expect = 0.30
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 82  TKCRTSSYSVLHENSYKDP-THKHCFGDEPPGSH 114
           T+ +  SYS+LH N+ ++P +H H F  +  GSH
Sbjct: 843 TESKVYSYSLLHTNNVQEPKSHIHSFIHKAEGSH 876


>AE014135-195|AAN06580.1|  978|Drosophila melanogaster CG11059-PB,
           isoform B protein.
          Length = 978

 Score = 31.5 bits (68), Expect = 0.30
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 82  TKCRTSSYSVLHENSYKDP-THKHCFGDEPPGSH 114
           T+ +  SYS+LH N+ ++P +H H F  +  GSH
Sbjct: 843 TESKVYSYSLLHTNNVQEPKSHIHSFIHKAEGSH 876


>AE014135-194|AAF59384.2|  978|Drosophila melanogaster CG11059-PA,
           isoform A protein.
          Length = 978

 Score = 31.5 bits (68), Expect = 0.30
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 82  TKCRTSSYSVLHENSYKDP-THKHCFGDEPPGSH 114
           T+ +  SYS+LH N+ ++P +H H F  +  GSH
Sbjct: 843 TESKVYSYSLLHTNNVQEPKSHIHSFIHKAEGSH 876


>AY119587-1|AAM50241.1| 1235|Drosophila melanogaster LD15137p
           protein.
          Length = 1235

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 49  PGKRDMLEIVLSKLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKD 99
           PGK ++LE   +K S ++S   R   DD    L +CR S +  L E S ++
Sbjct: 856 PGKEELLEESTNKPSNQESQHHRLAIDDMRTRLNQCR-SKFEHLEEASRRN 905


>AY060966-1|AAL28514.1|  504|Drosophila melanogaster GM09639p
           protein.
          Length = 504

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 49  PGKRDMLEIVLSKLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKD 99
           PGK ++LE   +K S ++S   R   DD    L +CR S +  L E S ++
Sbjct: 125 PGKEELLEESTNKPSNQESQHHRLAIDDMRTRLNQCR-SKFEHLEEASRRN 174


>AE014298-1784|AAN09312.1| 1052|Drosophila melanogaster CG1848-PD,
           isoform D protein.
          Length = 1052

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 49  PGKRDMLEIVLSKLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKD 99
           PGK ++LE   +K S ++S   R   DD    L +CR S +  L E S ++
Sbjct: 673 PGKEELLEESTNKPSNQESQHHRLAIDDMRTRLNQCR-SKFEHLEEASRRN 722


>AE014298-1783|AAN09311.1| 1257|Drosophila melanogaster CG1848-PC,
           isoform C protein.
          Length = 1257

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 49  PGKRDMLEIVLSKLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKD 99
           PGK ++LE   +K S ++S   R   DD    L +CR S +  L E S ++
Sbjct: 878 PGKEELLEESTNKPSNQESQHHRLAIDDMRTRLNQCR-SKFEHLEEASRRN 927


>AE014298-1782|AAF48176.2| 1235|Drosophila melanogaster CG1848-PA,
           isoform A protein.
          Length = 1235

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 49  PGKRDMLEIVLSKLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKD 99
           PGK ++LE   +K S ++S   R   DD    L +CR S +  L E S ++
Sbjct: 856 PGKEELLEESTNKPSNQESQHHRLAIDDMRTRLNQCR-SKFEHLEEASRRN 905


>AB042818-1|BAB17234.1| 1257|Drosophila melanogaster LIM-kinase1
           protein.
          Length = 1257

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 49  PGKRDMLEIVLSKLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKD 99
           PGK ++LE   +K S ++S   R   DD    L +CR S +  L E S ++
Sbjct: 878 PGKEELLEESTNKPSNQESQHHRLAIDDMRTRLNQCR-SKFEHLEEASRRN 927


>AB042816-1|BAB17233.1| 1235|Drosophila melanogaster LIM-kinase1
           protein.
          Length = 1235

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 49  PGKRDMLEIVLSKLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKD 99
           PGK ++LE   +K S ++S   R   DD    L +CR S +  L E S ++
Sbjct: 856 PGKEELLEESTNKPSNQESQHHRLAIDDMRTRLNQCR-SKFEHLEEASRRN 905


>BT030286-1|ABN49425.1|  649|Drosophila melanogaster IP18554p
           protein.
          Length = 649

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 65  EKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKDPT-HKHCFGDEPPGSHSG 116
           E S L R     Y++   K +  +Y+  HE+  + PT H+H  G     S SG
Sbjct: 476 ECSELIRKFEAKYKVDSEKEKAHAYAQSHEDDKESPTEHEHSTGSSEEVSSSG 528


>AE014296-2173|AAN11852.2|  510|Drosophila melanogaster CG32112-PB,
           isoform B protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 50  GKRDMLEIVLS--KLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKDPTHKHCFG 107
           GK + L  V    K+ + +   F+ +  DY + +TK    + S L E  +K P   H  G
Sbjct: 23  GKPENLRKVFQFRKVISSRESCFKLVPRDYPVEITKKEIGAESTLIEGQFKTPMELHMPG 82

Query: 108 DEPPGSHSGN 117
             P  S   +
Sbjct: 83  VVPEESQQAH 92


>AE014134-92|AAN10495.1|  713|Drosophila melanogaster CG31921-PA
           protein.
          Length = 713

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 46  CLDPGKRDMLEIVLSKLSTEKSIL-FRSLTDDYEL--CLTKCRTSSYSVLHENSYKDPTH 102
           CLDP  +    + + KLS  KS L F  + D  +L   +   RT + S+ H N  + P  
Sbjct: 83  CLDPSTKGQDAVRIWKLSPHKSTLKFYGVADGLKLPEAVKFDRTLTTSLKHANGSRRPVP 142

Query: 103 K 103
           K
Sbjct: 143 K 143


>AE014296-2172|AAN11851.2|  528|Drosophila melanogaster CG32112-PA,
           isoform A protein.
          Length = 528

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 15/57 (26%), Positives = 25/57 (43%)

Query: 61  KLSTEKSILFRSLTDDYELCLTKCRTSSYSVLHENSYKDPTHKHCFGDEPPGSHSGN 117
           K+ + +   F+ +  DY + +TK    + S L E  +K P   H  G  P  S   +
Sbjct: 54  KVISSRESCFKLVPRDYPVEITKKEIGAESTLIEGQFKTPMELHMPGVVPEESQQAH 110


>AF132150-1|AAD34738.1|  313|Drosophila melanogaster unknown
           protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 57  IVLSKLSTEKS-ILFRSLTDDYELCLTKCRTSSYSVLHENSYKDPTHKH 104
           ++ + L T K  ++F + TD YEL LT+ +T     + E    D   KH
Sbjct: 254 VIANVLQTRKHRVVFVTPTDSYELHLTREQTLQGLEIEEPIVADVVQKH 302


>AE014297-2628|AAF55637.1|  313|Drosophila melanogaster CG5629-PB,
           isoform B protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 57  IVLSKLSTEKS-ILFRSLTDDYELCLTKCRTSSYSVLHENSYKDPTHKH 104
           ++ + L T K  ++F + TD YEL LT+ +T     + E    D   KH
Sbjct: 254 VIANVLQTRKHRVVFVTPTDSYELHLTREQTLQGLEIEEPIVADVVQKH 302


>AE014297-2627|AAN13797.1|  313|Drosophila melanogaster CG5629-PA,
           isoform A protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 57  IVLSKLSTEKS-ILFRSLTDDYELCLTKCRTSSYSVLHENSYKDPTHKH 104
           ++ + L T K  ++F + TD YEL LT+ +T     + E    D   KH
Sbjct: 254 VIANVLQTRKHRVVFVTPTDSYELHLTREQTLQGLEIEEPIVADVVQKH 302


>AE013599-3452|AAF46893.1|  218|Drosophila melanogaster CG13519-PA
           protein.
          Length = 218

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 50  GKRDMLEIVLSKLSTEKSILFRSLTDDYELCLTK-CRTSSYSV 91
           GK D + + + KL  EK+ + R    DY + + + CR  +  V
Sbjct: 100 GKSDTINMKMVKLDAEKTFVDRPKEKDYHIAMFEFCRKDAVGV 142


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.318    0.135    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,399,093
Number of Sequences: 52641
Number of extensions: 227186
Number of successful extensions: 343
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 328
Number of HSP's gapped (non-prelim): 21
length of query: 119
length of database: 24,830,863
effective HSP length: 76
effective length of query: 43
effective length of database: 20,830,147
effective search space: 895696321
effective search space used: 895696321
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)

- SilkBase 1999-2023 -